@COMMENT
LIGANDBOX_ID = PDB_LIGAND-00005413-01
SOURCE = PDB_LIGAND
SUPPLIER = PDB_LIGAND
IDNUMBER = AMP
MOLECULAR_FORMULA = C10H12N5O7P
MOLECULAR_WEIGHT = 345.208
MOLECULAR_CHARGE = -2
NUM_OF_DONOR = 4
NUM_OF_ACCEPTOR = 10
HOMO = 0.3288
LUMO = 3.6777
NUM_OF_CHIRAL_ATOMS = 4
LOGS =
LOGP = 0.3639
NOTE =
@MOLECULE
PDB_LIGAND-00005413-01
35 37 0 0 0
SMALL
USER_CHARGES
@ATOM
1 P1 -4.5370 -1.0990 -0.0480 P.3 1 UNK 2.4880
2 O1 -5.6120 -0.1810 -0.5800 O.co2 1 UNK -1.2623
3 O2 -5.0690 -1.9270 1.0970 O.co2 1 UNK -1.2623
4 O3 -3.9990 -1.9990 -1.1350 O.co2 1 UNK -1.2623
5 O4 -3.3550 -0.2070 0.5080 O.3 1 UNK -0.7278
6 C1 -2.5190 0.5570 -0.3860 C.3 1 UNK 0.0526
7 H1 -1.9440 -0.1210 -1.0170 H 1 UNK 0.0634
8 H2 -3.1620 1.1750 -1.0140 H 1 UNK 0.0634
9 C2 -1.5890 1.4560 0.4420 C.3 1 UNK 0.0295
10 H3 -2.1630 1.9700 1.2130 H 1 UNK 0.1436
11 O5 -0.5520 0.6490 1.0530 O.3 1 UNK -0.2395
12 C3 -0.8490 2.4650 -0.4550 C.3 1 UNK -0.0384
13 H4 -1.4050 2.6920 -1.3650 H 1 UNK 0.0998
14 O6 -0.6180 3.6700 0.2950 O.3 1 UNK -0.3241
15 H5 -0.0950 4.2780 -0.2330 H 1 UNK 0.1866
16 C4 0.4680 1.7330 -0.7610 C.3 1 UNK -0.0572
17 H6 0.3100 0.9970 -1.5490 H 1 UNK 0.1069
18 O7 1.5230 2.6300 -1.1370 O.3 1 UNK -0.3296
19 H7 1.3090 3.0420 -1.9770 H 1 UNK 0.1950
20 C5 0.7510 1.0310 0.5680 C.3 1 UNK 0.1694
21 H8 1.1780 1.7480 1.2970 H 1 UNK 0.1408
22 N1 1.6430 -0.1110 0.4240 N.ar 1 UNK -0.1369
23 C6 1.4050 -1.2300 -0.3300 C.ar 1 UNK -0.0028
24 H9 0.4230 -1.5650 -0.6670 H 1 UNK 0.2512
25 N2 2.5340 -1.8210 -0.6040 N.ar 1 UNK -0.2051
26 C7 3.4940 -1.1170 -0.0800 C.ar 1 UNK -0.2063
27 C8 4.7960 -1.3720 -0.1790 C.ar 1 UNK 0.2581
28 N3 5.3010 -2.4750 -0.8150 N.pl3 1 UNK -0.3881
29 H10 4.7000 -3.1510 -1.2420 H 1 UNK 0.2338
30 H11 6.2850 -2.6430 -0.8640 H 1 UNK 0.2338
31 N4 5.5830 -0.4910 0.3880 N.ar 1 UNK -0.3346
32 C9 5.0820 0.5580 0.9980 C.ar 1 UNK 0.0401
33 H12 5.7710 1.2700 1.4520 H 1 UNK 0.1760
34 N5 3.7970 0.7930 1.0890 N.ar 1 UNK -0.2360
35 C10 2.9910 -0.0690 0.5390 C.ar 1 UNK 0.0813
@BOND
1 1 2 2
2 1 3 1
3 1 4 1
4 1 5 1
5 5 6 1
6 6 9 1
7 6 7 1
8 6 8 1
9 9 11 1
10 9 12 1
11 9 10 1
12 11 20 1
13 12 14 1
14 12 16 1
15 12 13 1
16 14 15 1
17 16 18 1
18 16 20 1
19 16 17 1
20 18 19 1
21 20 22 1
22 20 21 1
23 22 23 ar
24 22 35 ar
25 23 25 ar
26 23 24 1
27 25 26 ar
28 26 27 ar
29 26 35 ar
30 27 28 1
31 27 31 ar
32 28 29 1
33 28 30 1
34 31 32 ar
35 32 34 ar
36 32 33 1
37 34 35 ar