@COMMENT
LIGANDBOX_ID = PDB_LIGAND-00012825-29
SOURCE = PDB_LIGAND
SUPPLIER = PDB_LIGAND
IDNUMBER = NT1
MOLECULAR_FORMULA = C55H92O54S6
MOLECULAR_WEIGHT = 1809.677
MOLECULAR_CHARGE = -6
NUM_OF_DONOR = 4
NUM_OF_ACCEPTOR = 54
HOMO = 1.3604
LUMO = 8.7686
NUM_OF_CHIRAL_ATOMS = 33
LOGS =
LOGP = -8.7260
NOTE =
@MOLECULE
PDB_LIGAND-00012825-29
207 213 0 0 0
SMALL
USER_CHARGES
@ATOM
1 C1 7.5490 12.9410 9.3630 C.3 1 UNK -0.1817
2 H1 8.1810 12.6680 8.5180 H 1 UNK 0.0988
3 H2 6.8210 13.6800 9.0290 H 1 UNK 0.0988
4 C2 6.8270 11.6930 9.8900 C.3 1 UNK 0.0546
5 H3 6.2040 11.9470 10.7490 H 1 UNK 0.1023
6 O1 7.8460 10.7590 10.2940 O.3 1 UNK -0.2990
7 C3 5.9570 11.0150 8.8210 C.3 1 UNK -0.0027
8 H4 6.5800 10.6560 8.0010 H 1 UNK 0.0899
9 H5 5.4380 10.1650 9.2700 H 1 UNK 0.0899
10 O2 4.9820 11.9560 8.3090 O.3 1 UNK -0.3169
11 C4 3.9710 11.3970 7.4370 C.3 1 UNK -0.0566
12 H6 3.3030 12.1900 7.1030 H 1 UNK 0.0835
13 H7 4.4450 10.9330 6.5710 H 1 UNK 0.0835
14 H8 3.3920 10.6460 7.9790 H 1 UNK 0.0835
15 C5 8.4070 13.5520 10.4830 C.3 1 UNK 0.0471
16 H9 7.7380 13.9170 11.2630 H 1 UNK 0.0890
17 O3 9.1120 14.6850 9.8910 O.3 1 UNK -0.3099
18 C6 9.7860 15.6200 10.7630 C.3 1 UNK -0.0497
19 H10 10.6550 15.1450 11.2180 H 1 UNK 0.0614
20 H11 9.0990 15.9570 11.5400 H 1 UNK 0.0614
21 H12 10.1170 16.4760 10.1750 H 1 UNK 0.0614
22 C7 9.3930 12.5260 11.1050 C.3 1 UNK 0.0010
23 H13 10.2400 12.3930 10.4320 H 1 UNK 0.1005
24 O4 9.8520 13.0940 12.3720 O.3 1 UNK -0.3169
25 C8 10.9230 12.4300 13.0860 C.3 1 UNK -0.0526
26 H14 11.7710 12.2780 12.4190 H 1 UNK 0.0729
27 H15 11.2280 13.0530 13.9270 H 1 UNK 0.0729
28 H16 10.5810 11.4690 13.4680 H 1 UNK 0.0729
29 C9 8.7360 11.1440 11.3680 C.3 1 UNK 0.1620
30 H17 8.1420 11.1820 12.3000 H 1 UNK 0.0938
31 O5 9.7750 10.1400 11.4980 O.3 1 UNK -0.2975
32 C10 9.3980 8.7450 11.7060 C.3 1 UNK -0.0067
33 H18 8.3990 8.5430 11.3170 H 1 UNK 0.1507
34 C11 9.4420 8.4810 13.2310 C.3 1 UNK 0.0414
35 H19 10.3400 8.9380 13.6460 H 1 UNK 0.0730
36 O6 9.4970 7.0710 13.5370 O.3 1 UNK -0.2714
37 C12 8.2000 9.0500 13.9400 C.3 1 UNK -0.0084
38 H20 7.3810 9.1750 13.2310 H 1 UNK 0.0987
39 H21 7.8760 8.3570 14.7150 H 1 UNK 0.0987
40 C13 10.4050 7.8600 10.9320 C.3 1 UNK 0.0145
41 H22 11.4180 8.2110 11.1230 H 1 UNK 0.0770
42 O7 10.1320 7.9300 9.5000 O.3 1 UNK -0.2703
43 C14 10.5700 9.0790 8.7430 C.3 1 UNK -0.0490
44 H23 11.6360 9.2350 8.9020 H 1 UNK 0.0579
45 H24 10.3840 8.8900 7.6860 H 1 UNK 0.0579
46 H25 10.0140 9.9650 9.0440 H 1 UNK 0.0579
47 C15 10.3260 6.3750 11.3450 C.3 1 UNK 0.0250
48 H26 9.3710 5.9480 11.0280 H 1 UNK 0.1716
49 O8 11.4340 5.6950 10.6850 O.3 1 UNK -0.2882
50 C16 11.1910 4.3160 10.3070 C.3 1 UNK -0.0525
51 H27 11.0090 3.7050 11.1910 H 1 UNK 0.0727
52 H28 12.0600 3.9280 9.7780 H 1 UNK 0.0727
53 H29 10.3190 4.2640 9.6540 H 1 UNK 0.0727
54 C17 10.4800 6.2450 12.8760 C.3 1 UNK 0.1859
55 H30 11.4850 6.5860 13.1890 H 1 UNK 0.0463
56 O9 8.5160 10.3220 14.5660 O.3 1 UNK -0.3185
57 C18 7.4100 10.9920 15.2070 C.3 1 UNK -0.0492
58 H31 7.7600 11.9320 15.6310 H 1 UNK 0.0597
59 H32 6.6290 11.1930 14.4720 H 1 UNK 0.0597
60 H33 7.0100 10.3590 16.0000 H 1 UNK 0.0597
61 O10 10.3490 4.8550 13.2610 O.3 1 UNK -0.1860
62 C19 10.0970 4.4390 14.6300 C.3 1 UNK -0.0074
63 H34 10.3760 5.2440 15.3070 H 1 UNK 0.0591
64 C20 11.0530 3.2320 14.8770 C.3 1 UNK -0.0076
65 H35 11.1580 2.6590 13.9540 H 1 UNK 0.1540
66 O11 10.5460 2.3480 15.9200 O.3 1 UNK -0.2921
67 C21 12.4230 3.8100 15.2970 C.3 1 UNK 0.0569
68 H36 12.3090 4.3500 16.2360 H 1 UNK 0.0853
69 H37 12.7630 4.5070 14.5310 H 1 UNK 0.0853
70 O12 13.4400 2.7870 15.4650 O.3 1 UNK -0.7255
71 S1 14.8080 3.2880 16.0290 S.o2 1 UNK 2.6464
72 O13 15.6830 2.0840 15.9740 O.co2 1 UNK -1.0409
73 O14 14.4940 3.7490 17.4120 O.co2 1 UNK -1.0409
74 O15 15.2260 4.3910 15.1170 O.co2 1 UNK -1.0409
75 C22 8.5770 4.1330 14.7920 C.3 1 UNK 0.0254
76 H38 8.2260 3.7330 13.8390 H 1 UNK 0.2093
77 O16 7.8210 5.3590 15.0800 O.3 1 UNK -0.2119
78 C23 7.9590 6.0520 16.3440 C.3 1 UNK -0.0604
79 H39 7.6330 5.4110 17.1620 H 1 UNK 0.0455
80 H40 8.9940 6.3570 16.4950 H 1 UNK 0.0455
81 H41 7.3240 6.9360 16.3250 H 1 UNK 0.0455
82 C24 8.2950 3.0900 15.9030 C.3 1 UNK 0.0002
83 H42 8.5790 3.5280 16.8580 H 1 UNK 0.0475
84 O17 6.8880 2.7110 16.0300 O.3 1 UNK -0.2526
85 C25 6.1030 2.4680 14.8290 C.3 1 UNK -0.0500
86 H43 5.9800 3.3960 14.2680 H 1 UNK 0.0695
87 H44 6.5920 1.7320 14.1930 H 1 UNK 0.0695
88 H45 5.1200 2.0930 15.1120 H 1 UNK 0.0695
89 C26 9.1960 1.8590 15.7530 C.3 1 UNK 0.1712
90 H46 8.9800 1.1320 16.5600 H 1 UNK 0.1025
91 O18 9.0040 1.2270 14.4620 O.3 1 UNK -0.2689
92 C27 9.1520 -0.2150 14.3690 C.3 1 UNK 0.0375
93 H47 10.0360 -0.4720 14.9540 H 1 UNK 0.0931
94 C28 9.4240 -0.5830 12.8880 C.3 1 UNK 0.0607
95 H48 9.6630 0.3320 12.3480 H 1 UNK 0.1109
96 O19 8.2900 -1.2060 12.2330 O.3 1 UNK -0.2695
97 C29 10.6240 -1.5430 12.7620 C.3 1 UNK 0.1822
98 H49 11.5170 -1.0880 13.2350 H 1 UNK 0.0684
99 O20 10.9130 -1.7810 11.3830 O.3 1 UNK -0.3197
100 H50 10.0930 -2.0710 10.9700 H 1 UNK 0.1955
101 O21 10.3440 -2.7910 13.4040 O.3 1 UNK -0.3197
102 H51 9.5000 -3.1150 13.0680 H 1 UNK 0.1955
103 C30 7.9150 -0.8910 15.0220 C.3 1 UNK 0.0382
104 H52 7.4830 -0.1570 15.7010 H 1 UNK 0.0828
105 O22 8.3720 -1.9860 15.8710 O.3 1 UNK -0.2777
106 C31 7.3920 -2.6590 16.6960 C.3 1 UNK -0.0469
107 H53 6.8690 -1.9270 17.3120 H 1 UNK 0.0516
108 H54 6.6740 -3.1880 16.0680 H 1 UNK 0.0516
109 H55 7.9020 -3.3780 17.3350 H 1 UNK 0.0516
110 C32 6.7640 -1.3310 14.0780 C.3 1 UNK 0.0176
111 H56 6.7310 -2.4200 14.0280 H 1 UNK 0.1174
112 O23 5.5250 -0.8460 14.6930 O.3 1 UNK -0.3019
113 C33 4.2570 -1.2680 14.1340 C.3 1 UNK -0.0493
114 H57 4.0930 -0.7840 13.1720 H 1 UNK 0.0756
115 H58 3.4550 -0.9800 14.8110 H 1 UNK 0.0756
116 H59 4.2540 -2.3510 14.0040 H 1 UNK 0.0756
117 C34 6.9590 -0.8240 12.6340 C.3 1 UNK 0.1653
118 H60 6.8570 0.2770 12.5570 H 1 UNK 0.1094
119 O24 5.9760 -1.4670 11.7810 O.3 1 UNK -0.2437
120 C35 6.1760 -1.6560 10.3510 C.3 1 UNK 0.0112
121 H61 7.1940 -1.9910 10.1550 H 1 UNK 0.1126
122 C36 5.9270 -0.2830 9.6650 C.3 1 UNK -0.0200
123 H62 5.0400 0.1430 10.1240 H 1 UNK 0.1168
124 O25 5.6480 -0.4390 8.2480 O.3 1 UNK -0.3216
125 C37 7.0540 0.7520 9.8210 C.3 1 UNK 0.0585
126 H63 7.3680 1.1070 8.8390 H 1 UNK 0.0890
127 H64 7.9180 0.3240 10.3240 H 1 UNK 0.0890
128 O26 6.5440 1.8780 10.5790 O.3 1 UNK -0.7313
129 S2 7.5240 3.0630 10.7990 S.o2 1 UNK 2.6318
130 O27 6.7390 4.0040 11.6390 O.co2 1 UNK -1.0231
131 O28 8.6970 2.4520 11.4840 O.co2 1 UNK -1.0231
132 O29 7.8180 3.5560 9.4230 O.co2 1 UNK -1.0231
133 C38 5.1960 -2.7910 9.8970 C.3 1 UNK 0.1019
134 H65 4.2580 -2.7150 10.4470 H 1 UNK 0.1331
135 O30 5.8120 -4.1070 10.1230 O.3 1 UNK -0.7079
136 S3 5.9520 -4.7280 11.5530 S.o2 1 UNK 2.6359
137 O31 5.9580 -6.1970 11.2950 O.co2 1 UNK -1.0362
138 O32 7.2650 -4.2250 12.0470 O.co2 1 UNK -1.0362
139 O33 4.7740 -4.2630 12.3380 O.co2 1 UNK -1.0362
140 C39 4.8820 -2.7090 8.3780 C.3 1 UNK 0.0887
141 H66 5.7990 -2.9880 7.8630 H 1 UNK 0.1252
142 O34 3.8280 -3.6430 7.9660 O.3 1 UNK -0.6935
143 S4 3.6110 -3.9300 6.4390 S.o2 1 UNK 2.6459
144 O35 2.6980 -2.8490 5.9780 O.co2 1 UNK -1.0474
145 O36 2.9790 -5.2780 6.4160 O.co2 1 UNK -1.0474
146 O37 4.9560 -3.8750 5.7970 O.co2 1 UNK -1.0474
147 C40 4.5150 -1.2740 7.9450 C.3 1 UNK 0.1273
148 H67 4.3420 -1.2560 6.8510 H 1 UNK 0.1520
149 O38 3.3350 -0.7520 8.6280 O.3 1 UNK -0.2863
150 C41 2.6810 0.4000 8.0190 C.3 1 UNK 0.0309
151 H68 3.3220 0.7190 7.1960 H 1 UNK 0.1065
152 C42 2.5980 1.6460 8.9470 C.3 1 UNK -0.0233
153 H69 3.6270 1.9920 9.0650 H 1 UNK 0.1877
154 O39 1.9040 2.7150 8.2270 O.3 1 UNK -0.2832
155 C43 2.0420 1.5490 10.3960 C.3 1 UNK 0.1581
156 H70 2.0090 2.5730 10.8200 H 1 UNK 0.0943
157 O40 2.8980 0.7710 11.2340 O.3 1 UNK -0.3606
158 H71 3.7830 1.1480 11.2340 H 1 UNK 0.2569
159 O41 0.7230 1.0110 10.4670 O.3 1 UNK -0.3606
160 H72 0.7340 0.1490 10.0380 H 1 UNK 0.2569
161 C44 1.3420 -0.0160 7.3610 C.3 1 UNK 0.0345
162 H73 1.5540 -0.7320 6.5680 H 1 UNK 0.1180
163 O42 0.4100 -0.6390 8.2940 O.3 1 UNK -0.2717
164 C45 0.5850 -2.0560 8.5580 C.3 1 UNK -0.0451
165 H74 1.5170 -2.2390 9.0900 H 1 UNK 0.0596
166 H75 -0.2430 -2.4080 9.1710 H 1 UNK 0.0596
167 H76 0.5960 -2.6080 7.6170 H 1 UNK 0.0596
168 C46 0.6870 1.2190 6.7000 C.3 1 UNK -0.0191
169 H77 1.3180 1.5070 5.8580 H 1 UNK 0.0935
170 O43 -0.6090 0.7980 6.1630 O.3 1 UNK -0.3085
171 C47 -1.3130 1.6540 5.2320 C.3 1 UNK -0.0520
172 H78 -0.6250 2.0080 4.4640 H 1 UNK 0.0592
173 H79 -1.7450 2.5040 5.7610 H 1 UNK 0.0592
174 H80 -2.1160 1.0840 4.7680 H 1 UNK 0.0592
175 C48 0.5940 2.4430 7.6530 C.3 1 UNK 0.1549
176 H81 -0.1320 2.2600 8.4690 H 1 UNK 0.1038
177 O44 0.1460 3.5740 6.8550 O.3 1 UNK -0.3260
178 C49 0.2820 4.9830 7.2220 C.3 1 UNK 0.0034
179 H82 1.2940 5.1620 7.5870 H 1 UNK 0.1044
180 C50 -0.7450 5.3560 8.3190 C.3 1 UNK -0.0040
181 H83 -0.9740 4.4690 8.9090 H 1 UNK 0.1681
182 O45 -1.9680 5.7980 7.6630 O.3 1 UNK -0.2716
183 C51 -0.2000 6.4380 9.2860 C.3 1 UNK 0.0306
184 H84 0.7080 6.0740 9.7670 H 1 UNK 0.0912
185 H85 0.0410 7.3530 8.7470 H 1 UNK 0.0912
186 O46 -1.1850 6.7210 10.3170 O.3 1 UNK -0.6667
187 S5 -0.9170 7.9630 11.2190 S.o2 1 UNK 2.6341
188 O47 -1.9240 7.8330 12.3100 O.co2 1 UNK -1.0429
189 O48 -1.1510 9.1220 10.3130 O.co2 1 UNK -1.0429
190 O49 0.4970 7.8270 11.6670 O.co2 1 UNK -1.0429
191 C52 0.0640 5.7410 5.8760 C.3 1 UNK 0.0439
192 H86 -0.5020 5.0720 5.2260 H 1 UNK 0.0915
193 O50 1.3550 5.9800 5.2400 O.3 1 UNK -0.2847
194 C53 2.1120 4.8280 4.7980 C.3 1 UNK -0.0493
195 H87 2.4290 4.2350 5.6570 H 1 UNK 0.0547
196 H88 2.9930 5.1690 4.2550 H 1 UNK 0.0547
197 H89 1.4940 4.2170 4.1390 H 1 UNK 0.0547
198 C54 -0.7470 7.0650 5.8900 C.3 1 UNK 0.0739
199 H90 -0.0760 7.8970 6.1070 H 1 UNK 0.1167
200 O51 -1.3070 7.2230 4.5460 O.3 1 UNK -0.7297
201 S6 -1.6200 8.6530 4.0000 S.o2 1 UNK 2.6392
202 O52 -2.4830 9.3060 5.0230 O.co2 1 UNK -1.0424
203 O53 -2.3130 8.3830 2.7080 O.co2 1 UNK -1.0424
204 O54 -0.2810 9.2880 3.8490 O.co2 1 UNK -1.0424
205 C55 -1.9060 7.0460 6.9150 C.3 1 UNK -0.0395
206 H91 -2.8570 7.1750 6.3990 H 1 UNK 0.1204
207 H92 -1.7900 7.8790 7.6090 H 1 UNK 0.1204
@BOND
1 1 4 1
2 1 15 1
3 1 2 1
4 1 3 1
5 4 6 1
6 4 7 1
7 4 5 1
8 6 29 1
9 7 10 1
10 7 8 1
11 7 9 1
12 10 11 1
13 11 12 1
14 11 13 1
15 11 14 1
16 15 17 1
17 15 22 1
18 15 16 1
19 17 18 1
20 18 19 1
21 18 20 1
22 18 21 1
23 22 24 1
24 22 29 1
25 22 23 1
26 24 25 1
27 25 26 1
28 25 27 1
29 25 28 1
30 29 31 1
31 29 30 1
32 31 32 1
33 32 34 1
34 32 40 1
35 32 33 1
36 34 36 1
37 34 37 1
38 34 35 1
39 36 54 1
40 37 56 1
41 37 38 1
42 37 39 1
43 40 42 1
44 40 47 1
45 40 41 1
46 42 43 1
47 43 44 1
48 43 45 1
49 43 46 1
50 47 49 1
51 47 54 1
52 47 48 1
53 49 50 1
54 50 51 1
55 50 52 1
56 50 53 1
57 54 61 1
58 54 55 1
59 56 57 1
60 57 58 1
61 57 59 1
62 57 60 1
63 61 62 1
64 62 64 1
65 62 75 1
66 62 63 1
67 64 66 1
68 64 67 1
69 64 65 1
70 66 89 1
71 67 70 1
72 67 68 1
73 67 69 1
74 70 71 1
75 71 72 1
76 71 73 2
77 71 74 2
78 75 77 1
79 75 82 1
80 75 76 1
81 77 78 1
82 78 79 1
83 78 80 1
84 78 81 1
85 82 84 1
86 82 89 1
87 82 83 1
88 84 85 1
89 85 86 1
90 85 87 1
91 85 88 1
92 89 91 1
93 89 90 1
94 91 92 1
95 92 94 1
96 92 103 1
97 92 93 1
98 94 96 1
99 94 97 1
100 94 95 1
101 96 117 1
102 97 99 1
103 97 101 1
104 97 98 1
105 99 100 1
106 101 102 1
107 103 105 1
108 103 110 1
109 103 104 1
110 105 106 1
111 106 107 1
112 106 108 1
113 106 109 1
114 110 112 1
115 110 117 1
116 110 111 1
117 112 113 1
118 113 114 1
119 113 115 1
120 113 116 1
121 117 119 1
122 117 118 1
123 119 120 1
124 120 122 1
125 120 133 1
126 120 121 1
127 122 124 1
128 122 125 1
129 122 123 1
130 124 147 1
131 125 128 1
132 125 126 1
133 125 127 1
134 128 129 1
135 129 130 1
136 129 131 2
137 129 132 2
138 133 135 1
139 133 140 1
140 133 134 1
141 135 136 1
142 136 137 1
143 136 138 2
144 136 139 2
145 140 142 1
146 140 147 1
147 140 141 1
148 142 143 1
149 143 144 1
150 143 145 2
151 143 146 2
152 147 149 1
153 147 148 1
154 149 150 1
155 150 152 1
156 150 161 1
157 150 151 1
158 152 154 1
159 152 155 1
160 152 153 1
161 154 175 1
162 155 157 1
163 155 159 1
164 155 156 1
165 157 158 1
166 159 160 1
167 161 163 1
168 161 168 1
169 161 162 1
170 163 164 1
171 164 165 1
172 164 166 1
173 164 167 1
174 168 170 1
175 168 175 1
176 168 169 1
177 170 171 1
178 171 172 1
179 171 173 1
180 171 174 1
181 175 177 1
182 175 176 1
183 177 178 1
184 178 180 1
185 178 191 1
186 178 179 1
187 180 182 1
188 180 183 1
189 180 181 1
190 182 205 1
191 183 186 1
192 183 184 1
193 183 185 1
194 186 187 1
195 187 188 1
196 187 189 2
197 187 190 2
198 191 193 1
199 191 198 1
200 191 192 1
201 193 194 1
202 194 195 1
203 194 196 1
204 194 197 1
205 198 200 1
206 198 205 1
207 198 199 1
208 200 201 1
209 201 202 1
210 201 203 2
211 201 204 2
212 205 206 1
213 205 207 1