@COMMENT
LIGANDBOX_ID = PDB_LIGAND-00012825-32
SOURCE = PDB_LIGAND
SUPPLIER = PDB_LIGAND
IDNUMBER = NT1
MOLECULAR_FORMULA = C55H92O54S6
MOLECULAR_WEIGHT = 1809.677
MOLECULAR_CHARGE = -6
NUM_OF_DONOR = 4
NUM_OF_ACCEPTOR = 54
HOMO = 1.3604
LUMO = 8.7686
NUM_OF_CHIRAL_ATOMS = 33
LOGS =
LOGP = -8.7260
NOTE =
@MOLECULE
PDB_LIGAND-00012825-32
207 213 0 0 0
SMALL
USER_CHARGES
@ATOM
1 C1 7.4740 12.8350 9.2680 C.3 1 UNK -0.1817
2 H1 8.1270 12.5710 8.4360 H 1 UNK 0.0988
3 H2 6.7410 13.5610 8.9180 H 1 UNK 0.0988
4 C2 6.7600 11.5770 9.7810 C.3 1 UNK 0.0546
5 H3 6.1110 11.8220 10.6230 H 1 UNK 0.1023
6 O1 7.7820 10.6580 10.2150 O.3 1 UNK -0.2990
7 C3 5.9260 10.8890 8.6890 C.3 1 UNK -0.0027
8 H4 6.5660 10.5880 7.8590 H 1 UNK 0.0899
9 H5 5.4460 10.0020 9.1060 H 1 UNK 0.0899
10 O2 4.9090 11.8010 8.2080 O.3 1 UNK -0.3169
11 C4 3.9630 11.2390 7.2630 C.3 1 UNK -0.0566
12 H6 3.2510 12.0050 6.9570 H 1 UNK 0.0835
13 H7 4.4900 10.8700 6.3820 H 1 UNK 0.0835
14 H8 3.4180 10.4140 7.7250 H 1 UNK 0.0835
15 C5 8.3010 13.4600 10.4030 C.3 1 UNK 0.0471
16 H9 7.6120 13.8150 11.1710 H 1 UNK 0.0890
17 O3 8.9990 14.6030 9.8240 O.3 1 UNK -0.3099
18 C6 9.6420 15.5510 10.7070 C.3 1 UNK -0.0497
19 H10 10.5110 15.0910 11.1770 H 1 UNK 0.0614
20 H11 8.9370 15.8760 11.4710 H 1 UNK 0.0614
21 H12 9.9690 16.4110 10.1230 H 1 UNK 0.0614
22 C7 9.2910 12.4490 11.0430 C.3 1 UNK 0.0010
23 H13 10.1480 12.3240 10.3810 H 1 UNK 0.1005
24 O4 9.7270 13.0270 12.3140 O.3 1 UNK -0.3169
25 C8 10.8190 12.3970 13.0260 C.3 1 UNK -0.0526
26 H14 11.6750 12.2850 12.3610 H 1 UNK 0.0729
27 H15 11.0960 13.0210 13.8750 H 1 UNK 0.0729
28 H16 10.5130 11.4190 13.3960 H 1 UNK 0.0729
29 C9 8.6450 11.0610 11.3030 C.3 1 UNK 0.1620
30 H17 8.0330 11.0970 12.2240 H 1 UNK 0.0938
31 O5 9.6920 10.0690 11.4610 O.3 1 UNK -0.2975
32 C10 9.3180 8.6760 11.6860 C.3 1 UNK -0.0067
33 H18 8.3100 8.4740 11.3170 H 1 UNK 0.1507
34 C11 9.3860 8.4290 13.2130 C.3 1 UNK 0.0414
35 H19 10.2920 8.8890 13.6080 H 1 UNK 0.0730
36 O6 9.4460 7.0230 13.5340 O.3 1 UNK -0.2714
37 C12 8.1580 9.0050 13.9390 C.3 1 UNK -0.0084
38 H20 7.3230 9.1100 13.2450 H 1 UNK 0.0987
39 H21 7.8550 8.3250 14.7340 H 1 UNK 0.0987
40 C13 10.3050 7.7780 10.9040 C.3 1 UNK 0.0145
41 H22 11.3260 8.1140 11.0830 H 1 UNK 0.0770
42 O7 10.0160 7.8450 9.4760 O.3 1 UNK -0.2703
43 C14 10.4870 8.9720 8.7050 C.3 1 UNK -0.0490
44 H23 11.5630 9.0800 8.8380 H 1 UNK 0.0579
45 H24 10.2680 8.7880 7.6530 H 1 UNK 0.0579
46 H25 9.9800 9.8830 9.0150 H 1 UNK 0.0579
47 C15 10.2030 6.2970 11.3300 C.3 1 UNK 0.0250
48 H26 9.2260 5.8940 11.0490 H 1 UNK 0.1716
49 O8 11.2680 5.5780 10.6420 O.3 1 UNK -0.2882
50 C16 10.9620 4.2080 10.2760 C.3 1 UNK -0.0525
51 H27 10.7760 3.6080 11.1670 H 1 UNK 0.0727
52 H28 11.8030 3.7840 9.7290 H 1 UNK 0.0727
53 H29 10.0730 4.1870 9.6440 H 1 UNK 0.0727
54 C17 10.4050 6.1850 12.8560 C.3 1 UNK 0.1859
55 H30 11.4210 6.5270 13.1320 H 1 UNK 0.0463
56 O9 8.4790 10.2910 14.5300 O.3 1 UNK -0.3185
57 C18 7.3840 10.9740 15.1750 C.3 1 UNK -0.0492
58 H31 7.7400 11.9240 15.5720 H 1 UNK 0.0597
59 H32 6.5910 11.1580 14.4490 H 1 UNK 0.0597
60 H33 6.9990 10.3580 15.9890 H 1 UNK 0.0597
61 O10 10.2820 4.8030 13.2680 O.3 1 UNK -0.1860
62 C19 10.0810 4.4210 14.6560 C.3 1 UNK -0.0074
63 H34 10.3910 5.2430 15.2970 H 1 UNK 0.0591
64 C20 11.0460 3.2200 14.8970 C.3 1 UNK -0.0076
65 H35 11.1540 2.6500 13.9720 H 1 UNK 0.1540
66 O11 10.5530 2.3260 15.9380 O.3 1 UNK -0.2921
67 C21 12.4120 3.8130 15.3120 C.3 1 UNK 0.0569
68 H36 12.2960 4.3480 16.2540 H 1 UNK 0.0853
69 H37 12.7370 4.5180 14.5460 H 1 UNK 0.0853
70 O12 13.4460 2.8060 15.4700 O.3 1 UNK -0.7255
71 S1 14.8090 3.3300 16.0240 S.o2 1 UNK 2.6464
72 O13 15.7040 2.1410 15.9630 O.co2 1 UNK -1.0409
73 O14 14.4970 3.7860 17.4090 O.co2 1 UNK -1.0409
74 O15 15.2020 4.4410 15.1100 O.co2 1 UNK -1.0409
75 C22 8.5640 4.1390 14.8850 C.3 1 UNK 0.0254
76 H38 8.1620 3.7590 13.9430 H 1 UNK 0.2093
77 O16 7.8450 5.3750 15.2210 O.3 1 UNK -0.2119
78 C23 8.0650 6.0590 16.4780 C.3 1 UNK -0.0604
79 H39 7.7660 5.4220 17.3090 H 1 UNK 0.0455
80 H40 9.1120 6.3400 16.5780 H 1 UNK 0.0455
81 H41 7.4520 6.9590 16.4930 H 1 UNK 0.0455
82 C24 8.3120 3.0850 15.9930 C.3 1 UNK 0.0002
83 H42 8.6330 3.5070 16.9420 H 1 UNK 0.0475
84 O17 6.9080 2.7130 16.1650 O.3 1 UNK -0.2526
85 C25 6.0750 2.5080 14.9890 C.3 1 UNK -0.0500
86 H43 5.9160 3.4580 14.4770 H 1 UNK 0.0695
87 H44 6.5450 1.8090 14.2980 H 1 UNK 0.0695
88 H45 5.1100 2.1070 15.2980 H 1 UNK 0.0695
89 C26 9.1960 1.8480 15.7910 C.3 1 UNK 0.1712
90 H46 8.9910 1.1020 16.5830 H 1 UNK 0.1025
91 O18 8.9680 1.2550 14.4880 O.3 1 UNK -0.2689
92 C27 9.0700 -0.1890 14.3570 C.3 1 UNK 0.0375
93 H47 9.9460 -0.4880 14.9320 H 1 UNK 0.0931
94 C28 9.3290 -0.5220 12.8660 C.3 1 UNK 0.0607
95 H48 9.5340 0.4090 12.3360 H 1 UNK 0.1109
96 O19 8.2060 -1.1670 12.2160 O.3 1 UNK -0.2695
97 C29 10.5550 -1.4450 12.7100 C.3 1 UNK 0.1822
98 H49 11.4410 -0.9710 13.1750 H 1 UNK 0.0684
99 O20 10.8290 -1.6590 11.3240 O.3 1 UNK -0.3197
100 H50 10.0120 -1.9640 10.9180 H 1 UNK 0.1955
101 O21 10.3180 -2.7080 13.3420 O.3 1 UNK -0.3197
102 H51 9.4690 -3.0420 13.0280 H 1 UNK 0.1955
103 C30 7.8150 -0.8440 14.9990 C.3 1 UNK 0.0382
104 H52 7.3910 -0.1010 15.6740 H 1 UNK 0.0828
105 O22 8.2520 -1.9430 15.8550 O.3 1 UNK -0.2777
106 C31 7.2560 -2.6020 16.6730 C.3 1 UNK -0.0469
107 H53 6.7340 -1.8620 17.2800 H 1 UNK 0.0516
108 H54 6.5390 -3.1270 16.0400 H 1 UNK 0.0516
109 H55 7.7520 -3.3240 17.3200 H 1 UNK 0.0516
110 C32 6.6610 -1.2710 14.0510 C.3 1 UNK 0.0176
111 H56 6.6040 -2.3590 14.0130 H 1 UNK 0.1174
112 O23 5.4290 -0.7550 14.6550 O.3 1 UNK -0.3019
113 C33 4.1580 -1.1000 14.0520 C.3 1 UNK -0.0493
114 H57 4.0430 -0.5800 13.1010 H 1 UNK 0.0756
115 H58 3.3520 -0.7950 14.7180 H 1 UNK 0.0756
116 H59 4.1090 -2.1770 13.8890 H 1 UNK 0.0756
117 C34 6.8700 -0.7870 12.6020 C.3 1 UNK 0.1653
118 H60 6.7620 0.3140 12.5150 H 1 UNK 0.1094
119 O24 5.9020 -1.4480 11.7430 O.3 1 UNK -0.2437
120 C35 6.1200 -1.6400 10.3150 C.3 1 UNK 0.0112
121 H61 7.1490 -1.9450 10.1280 H 1 UNK 0.1126
122 C36 5.8270 -0.2830 9.6180 C.3 1 UNK -0.0200
123 H62 4.8910 0.0730 10.0320 H 1 UNK 0.1168
124 O25 5.6260 -0.4450 8.1900 O.3 1 UNK -0.3216
125 C37 6.8760 0.8220 9.8320 C.3 1 UNK 0.0585
126 H63 7.1710 1.2450 8.8720 H 1 UNK 0.0890
127 H64 7.7630 0.4300 10.3250 H 1 UNK 0.0890
128 O26 6.2800 1.8750 10.6330 O.3 1 UNK -0.7313
129 S2 7.1840 3.0950 10.9590 S.o2 1 UNK 2.6318
130 O27 6.3300 3.9220 11.8470 O.co2 1 UNK -1.0231
131 O28 8.3820 2.5060 11.6210 O.co2 1 UNK -1.0231
132 O29 7.4700 3.7010 9.6270 O.co2 1 UNK -1.0231
133 C38 5.1740 -2.7950 9.8410 C.3 1 UNK 0.1019
134 H65 4.2020 -2.7030 10.3230 H 1 UNK 0.1331
135 O30 5.7740 -4.1000 10.1570 O.3 1 UNK -0.7079
136 S3 5.7740 -4.6860 11.6110 S.o2 1 UNK 2.6359
137 O31 5.7430 -6.1610 11.3960 O.co2 1 UNK -1.0362
138 O32 7.0650 -4.2190 12.1920 O.co2 1 UNK -1.0362
139 O33 4.5580 -4.1560 12.2900 O.co2 1 UNK -1.0362
140 C39 4.9630 -2.7510 8.3010 C.3 1 UNK 0.0887
141 H66 5.9220 -2.9940 7.8430 H 1 UNK 0.1252
142 O34 3.9930 -3.7480 7.8410 O.3 1 UNK -0.6935
143 S4 4.1650 -4.3730 6.4120 S.o2 1 UNK 2.6459
144 O35 4.3150 -3.2370 5.4620 O.co2 1 UNK -1.0474
145 O36 2.9100 -5.1530 6.2140 O.co2 1 UNK -1.0474
146 O37 5.3920 -5.2110 6.5120 O.co2 1 UNK -1.0474
147 C40 4.5530 -1.3320 7.8250 C.3 1 UNK 0.1273
148 H67 4.4650 -1.3220 6.7230 H 1 UNK 0.1520
149 O38 3.2900 -0.8380 8.3850 O.3 1 UNK -0.2863
150 C41 2.7320 0.3660 7.7570 C.3 1 UNK 0.0309
151 H68 3.3350 0.6040 6.8790 H 1 UNK 0.1065
152 C42 2.7990 1.6120 8.6870 C.3 1 UNK -0.0233
153 H69 3.8540 1.8640 8.8080 H 1 UNK 0.1877
154 O39 2.1910 2.7300 7.9690 O.3 1 UNK -0.2832
155 C43 2.1760 1.5440 10.1140 C.3 1 UNK 0.1581
156 H70 1.7000 2.5200 10.3350 H 1 UNK 0.0943
157 O40 3.1690 1.3370 11.1200 O.3 1 UNK -0.3606
158 H71 3.8980 1.9600 11.0140 H 1 UNK 0.2569
159 O41 1.1830 0.5260 10.2470 O.3 1 UNK -0.3606
160 H72 1.6410 -0.3200 10.2490 H 1 UNK 0.2569
161 C44 1.2950 0.0800 7.2480 C.3 1 UNK 0.0345
162 H73 0.7250 -0.4340 8.0220 H 1 UNK 0.1180
163 O42 1.3590 -0.7670 6.0650 O.3 1 UNK -0.2717
164 C45 1.3150 -2.1990 6.2630 C.3 1 UNK -0.0451
165 H74 0.3230 -2.4910 6.6030 H 1 UNK 0.0596
166 H75 1.5430 -2.7020 5.3230 H 1 UNK 0.0596
167 H76 2.0470 -2.4980 7.0080 H 1 UNK 0.0596
168 C46 0.5120 1.3370 6.8080 C.3 1 UNK -0.0191
169 H77 0.7750 1.5380 5.7680 H 1 UNK 0.0935
170 O43 -0.9070 0.9850 6.8700 O.3 1 UNK -0.3085
171 C47 -1.8770 1.8780 6.2740 C.3 1 UNK -0.0520
172 H78 -1.5760 2.1160 5.2530 H 1 UNK 0.0592
173 H79 -1.9490 2.7950 6.8600 H 1 UNK 0.0592
174 H80 -2.8490 1.3870 6.2620 H 1 UNK 0.0592
175 C48 0.7860 2.6320 7.6140 C.3 1 UNK 0.1549
176 H81 0.1820 2.6550 8.5430 H 1 UNK 0.1038
177 O44 0.3840 3.7290 6.7450 O.3 1 UNK -0.3260
178 C49 0.6180 5.1460 7.0150 C.3 1 UNK 0.0034
179 H82 1.6390 5.3000 7.3670 H 1 UNK 0.1044
180 C50 -0.4280 5.6110 8.0710 C.3 1 UNK -0.0040
181 H83 -0.9860 4.7380 8.4120 H 1 UNK 0.1681
182 O45 -1.3950 6.5060 7.4500 O.3 1 UNK -0.2716
183 C51 0.2220 6.2350 9.3310 C.3 1 UNK 0.0306
184 H84 1.1680 5.7250 9.5120 H 1 UNK 0.0912
185 H85 0.4440 7.2920 9.1990 H 1 UNK 0.0912
186 O46 -0.5830 6.0230 10.5310 O.3 1 UNK -0.6667
187 S5 -1.8260 6.9210 10.8300 S.o2 1 UNK 2.6341
188 O47 -1.9100 6.9020 12.3180 O.co2 1 UNK -1.0429
189 O48 -2.9530 6.2060 10.1690 O.co2 1 UNK -1.0429
190 O49 -1.5270 8.2660 10.2610 O.co2 1 UNK -1.0429
191 C52 0.4320 5.8320 5.6240 C.3 1 UNK 0.0439
192 H86 -0.3960 5.3050 5.1500 H 1 UNK 0.0915
193 O50 1.5910 5.6500 4.7500 O.3 1 UNK -0.2847
194 C53 2.0530 4.3170 4.4280 C.3 1 UNK -0.0493
195 H87 2.4910 3.8530 5.3130 H 1 UNK 0.0547
196 H88 2.8140 4.3850 3.6510 H 1 UNK 0.0547
197 H89 1.2180 3.7150 4.0690 H 1 UNK 0.0547
198 C54 0.0010 7.3260 5.5980 C.3 1 UNK 0.0739
199 H90 -0.5930 7.4550 4.6940 H 1 UNK 0.1167
200 O51 1.1420 8.2340 5.5290 O.3 1 UNK -0.7297
201 S6 0.9540 9.5380 4.6820 S.o2 1 UNK 2.6392
202 O52 0.6380 9.0620 3.3040 O.co2 1 UNK -1.0424
203 O53 2.2650 10.2340 4.7920 O.co2 1 UNK -1.0424
204 O54 -0.1760 10.2660 5.3260 O.co2 1 UNK -1.0424
205 C55 -0.8870 7.6990 6.8000 C.3 1 UNK -0.0395
206 H91 -1.7280 8.2990 6.4560 H 1 UNK 0.1204
207 H92 -0.3190 8.2960 7.5140 H 1 UNK 0.1204
@BOND
1 1 4 1
2 1 15 1
3 1 2 1
4 1 3 1
5 4 6 1
6 4 7 1
7 4 5 1
8 6 29 1
9 7 10 1
10 7 8 1
11 7 9 1
12 10 11 1
13 11 12 1
14 11 13 1
15 11 14 1
16 15 17 1
17 15 22 1
18 15 16 1
19 17 18 1
20 18 19 1
21 18 20 1
22 18 21 1
23 22 24 1
24 22 29 1
25 22 23 1
26 24 25 1
27 25 26 1
28 25 27 1
29 25 28 1
30 29 31 1
31 29 30 1
32 31 32 1
33 32 34 1
34 32 40 1
35 32 33 1
36 34 36 1
37 34 37 1
38 34 35 1
39 36 54 1
40 37 56 1
41 37 38 1
42 37 39 1
43 40 42 1
44 40 47 1
45 40 41 1
46 42 43 1
47 43 44 1
48 43 45 1
49 43 46 1
50 47 49 1
51 47 54 1
52 47 48 1
53 49 50 1
54 50 51 1
55 50 52 1
56 50 53 1
57 54 61 1
58 54 55 1
59 56 57 1
60 57 58 1
61 57 59 1
62 57 60 1
63 61 62 1
64 62 64 1
65 62 75 1
66 62 63 1
67 64 66 1
68 64 67 1
69 64 65 1
70 66 89 1
71 67 70 1
72 67 68 1
73 67 69 1
74 70 71 1
75 71 72 1
76 71 73 2
77 71 74 2
78 75 77 1
79 75 82 1
80 75 76 1
81 77 78 1
82 78 79 1
83 78 80 1
84 78 81 1
85 82 84 1
86 82 89 1
87 82 83 1
88 84 85 1
89 85 86 1
90 85 87 1
91 85 88 1
92 89 91 1
93 89 90 1
94 91 92 1
95 92 94 1
96 92 103 1
97 92 93 1
98 94 96 1
99 94 97 1
100 94 95 1
101 96 117 1
102 97 99 1
103 97 101 1
104 97 98 1
105 99 100 1
106 101 102 1
107 103 105 1
108 103 110 1
109 103 104 1
110 105 106 1
111 106 107 1
112 106 108 1
113 106 109 1
114 110 112 1
115 110 117 1
116 110 111 1
117 112 113 1
118 113 114 1
119 113 115 1
120 113 116 1
121 117 119 1
122 117 118 1
123 119 120 1
124 120 122 1
125 120 133 1
126 120 121 1
127 122 124 1
128 122 125 1
129 122 123 1
130 124 147 1
131 125 128 1
132 125 126 1
133 125 127 1
134 128 129 1
135 129 130 1
136 129 131 2
137 129 132 2
138 133 135 1
139 133 140 1
140 133 134 1
141 135 136 1
142 136 137 1
143 136 138 2
144 136 139 2
145 140 142 1
146 140 147 1
147 140 141 1
148 142 143 1
149 143 144 1
150 143 145 2
151 143 146 2
152 147 149 1
153 147 148 1
154 149 150 1
155 150 152 1
156 150 161 1
157 150 151 1
158 152 154 1
159 152 155 1
160 152 153 1
161 154 175 1
162 155 157 1
163 155 159 1
164 155 156 1
165 157 158 1
166 159 160 1
167 161 163 1
168 161 168 1
169 161 162 1
170 163 164 1
171 164 165 1
172 164 166 1
173 164 167 1
174 168 170 1
175 168 175 1
176 168 169 1
177 170 171 1
178 171 172 1
179 171 173 1
180 171 174 1
181 175 177 1
182 175 176 1
183 177 178 1
184 178 180 1
185 178 191 1
186 178 179 1
187 180 182 1
188 180 183 1
189 180 181 1
190 182 205 1
191 183 186 1
192 183 184 1
193 183 185 1
194 186 187 1
195 187 188 1
196 187 189 2
197 187 190 2
198 191 193 1
199 191 198 1
200 191 192 1
201 193 194 1
202 194 195 1
203 194 196 1
204 194 197 1
205 198 200 1
206 198 205 1
207 198 199 1
208 200 201 1
209 201 202 1
210 201 203 2
211 201 204 2
212 205 206 1
213 205 207 1