@COMMENT
LIGANDBOX_ID = PDB_LIGAND-00013205-01
SOURCE = PDB_LIGAND
SUPPLIER = PDB_LIGAND
IDNUMBER = OXT
MOLECULAR_FORMULA = C34H48N11O24P5S2
MOLECULAR_WEIGHT = 1213.811
MOLECULAR_CHARGE = -6
NUM_OF_DONOR = 9
NUM_OF_ACCEPTOR = 29
HOMO = 5.4336
LUMO = 8.4611
NUM_OF_CHIRAL_ATOMS = 6
LOGS =
LOGP = -5.1611
NOTE =
@MOLECULE
PDB_LIGAND-00013205-01
124 128 0 0 0
SMALL
USER_CHARGES
@ATOM
1 O1 -4.2440 -0.1370 1.8310 O.co2 1 UNK -1.2746
2 P1 -3.2770 1.0200 1.9050 P.3 1 UNK 2.5110
3 O2 -4.0130 2.2950 2.2400 O.co2 1 UNK -1.2746
4 O3 -2.1950 0.7610 2.9250 O.co2 1 UNK -1.2746
5 O4 -2.5920 1.2190 0.4910 O.3 1 UNK -0.7091
6 C1 -1.7510 0.1940 -0.0890 C.3 1 UNK 0.0928
7 H1 -1.1030 -0.2280 0.6810 H 1 UNK 0.0958
8 C2 -2.5500 -0.9240 -0.7780 C.3 1 UNK -0.0258
9 H2 -2.8870 -1.6780 -0.0670 H 1 UNK 0.1178
10 O5 -3.6610 -0.3990 -1.5230 O.3 1 UNK -0.2798
11 H4 -4.1750 -1.1250 -1.8830 H 1 UNK 0.1558
12 C3 -1.5190 -1.4890 -1.7690 C.3 1 UNK 0.0971
13 H5 -1.9930 -1.7760 -2.7280 H 1 UNK 0.1042
14 N1 -0.8290 -2.6450 -1.2120 N.ar 1 UNK -0.1302
15 C4 -1.2040 -3.9380 -1.3310 C.ar 1 UNK 0.0553
16 N2 -2.0980 -4.5320 -2.0690 N.ar 1 UNK -0.2309
17 C5 -2.2120 -5.8300 -1.9450 C.ar 1 UNK -0.0014
18 H7 -2.9560 -6.3440 -2.5530 H 1 UNK 0.1488
19 N3 -1.4730 -6.5450 -1.1290 N.ar 1 UNK -0.3623
20 C6 -0.5670 -5.9730 -0.3730 C.ar 1 UNK 0.2404
21 N4 0.2240 -6.7050 0.4720 N.pl3 1 UNK -0.4011
22 H8 0.9250 -6.2690 1.0370 H 1 UNK 0.2211
23 H9 0.1360 -7.6990 0.5400 H 1 UNK 0.2211
24 C7 -0.4680 -4.6550 -0.5070 C.ar 1 UNK -0.1819
25 N5 0.3440 -3.8780 0.1510 N.ar 1 UNK -0.2410
26 C8 0.1400 -2.6530 -0.2440 C.ar 1 UNK 0.0839
27 H6 0.6620 -1.7740 0.1360 H 1 UNK 0.2767
28 O6 -0.5750 -0.4230 -2.0180 O.3 1 UNK -0.2285
29 C9 -0.9020 0.7460 -1.2360 C.3 1 UNK 0.0116
30 H3 -1.4940 1.4280 -1.8480 H 1 UNK 0.1128
31 C10 0.3550 1.4450 -0.7070 C.3 1 UNK 0.0658
32 H11 0.0600 2.3540 -0.1850 H 1 UNK 0.0769
33 H10 0.8870 0.7900 -0.0170 H 1 UNK 0.0769
34 O7 1.2250 1.7960 -1.8030 O.3 1 UNK -0.7530
35 P2 2.5320 2.6620 -1.5680 P.3 1 UNK 2.5314
36 O8 2.1550 4.0040 -0.9840 O.co2 1 UNK -1.1540
37 O9 3.3140 2.8210 -2.8500 O.co2 1 UNK -1.1540
38 O10 3.3230 1.8060 -0.4860 O.3 1 UNK -1.1790
39 P3 3.9090 0.3520 -0.7610 P.3 1 UNK 2.5501
40 O11 4.9600 0.3490 -1.8450 O.co2 1 UNK -1.1749
41 O12 2.8530 -0.7080 -0.9650 O.co2 1 UNK -1.1749
42 O13 4.6160 0.1480 0.6420 O.3 1 UNK -0.7498
43 C11 3.8570 0.1120 1.8750 C.3 1 UNK 0.0602
44 H12 3.2930 1.0400 1.9510 H 1 UNK 0.0765
45 H13 3.1550 -0.7220 1.8330 H 1 UNK 0.0765
46 C12 4.7920 -0.0390 3.1020 C.3 1 UNK -0.0726
47 C13 5.5520 -1.3820 2.9800 C.3 1 UNK -0.1873
48 H14 6.2360 -1.5170 3.8170 H 1 UNK 0.0690
49 H15 6.1390 -1.4130 2.0630 H 1 UNK 0.0690
50 H16 4.8480 -2.2150 2.9670 H 1 UNK 0.0690
51 C14 5.8210 1.1180 3.1170 C.3 1 UNK -0.1873
52 H17 6.4790 1.0590 2.2510 H 1 UNK 0.0690
53 H18 6.4400 1.0730 4.0130 H 1 UNK 0.0690
54 H19 5.3160 2.0830 3.0880 H 1 UNK 0.0690
55 C15 3.9200 -0.0600 4.3960 C.3 1 UNK 0.0184
56 H20 3.2080 -0.8850 4.3270 H 1 UNK 0.1086
57 O14 4.7200 -0.2710 5.5700 O.3 1 UNK -0.3597
58 H21 5.2760 0.4980 5.7140 H 1 UNK 0.2084
59 C16 3.0850 1.1980 4.6000 C.2 1 UNK 0.2634
60 O15 3.5520 2.2740 5.0690 O.2 1 UNK -0.4334
61 N6 1.7850 1.0910 4.2260 N.am 1 UNK -0.3500
62 H22 1.4760 0.1980 3.8710 H 1 UNK 0.2360
63 C17 0.8400 2.2100 4.1570 C.3 1 UNK -0.0091
64 H23 -0.1580 1.8510 4.4090 H 1 UNK 0.1237
65 H24 1.1200 2.9890 4.8670 H 1 UNK 0.1237
66 C18 0.8410 2.7730 2.7280 C.3 1 UNK -0.1914
67 H25 0.5190 1.9930 2.0420 H 1 UNK 0.1221
68 H26 1.8590 3.0600 2.4590 H 1 UNK 0.1221
69 C19 -0.0640 3.9770 2.5550 C.2 1 UNK 0.3199
70 O16 -0.9670 4.3060 3.3740 O.2 1 UNK -0.4110
71 N7 0.1830 4.6970 1.4330 N.am 1 UNK -0.3818
72 H27 0.9280 4.3730 0.8300 H 1 UNK 0.2962
73 C20 -0.5770 5.8710 0.9960 C.3 1 UNK 0.0256
74 H28 -0.5450 5.9290 -0.0920 H 1 UNK 0.1100
75 H29 -1.6190 5.7740 1.3060 H 1 UNK 0.1100
76 C21 0.0220 7.1510 1.5930 C.3 1 UNK -0.3011
77 H30 -0.5900 7.9950 1.2760 H 1 UNK 0.0771
78 H31 -0.0260 7.0900 2.6810 H 1 UNK 0.0771
79 S1 1.7470 7.5040 1.1140 S.3 1 UNK 0.2719
80 C22 1.9960 9.1410 1.8740 C.3 1 UNK -0.0443
81 H32 1.2030 9.8110 1.4980 H 1 UNK 0.0796
82 O17 1.8820 9.0390 3.2980 O.3 1 UNK -0.3256
83 H33 2.0010 9.9040 3.6950 H 1 UNK 0.1579
84 C23 3.3680 9.6880 1.5160 C.2 1 UNK -0.3540
85 N8 3.5590 10.9400 0.9760 N.pl3 1 UNK -0.0892
86 C24 2.4690 11.8950 0.7300 C.3 1 UNK 0.0474
87 H34 2.8400 12.9170 0.7830 H 1 UNK 0.0704
88 H35 1.7100 11.7980 1.5060 H 1 UNK 0.0704
89 C25 1.8080 11.7000 -0.6250 C.ar 1 UNK -0.3142
90 C26 0.9050 12.6030 -1.0170 C.ar 1 UNK 0.2017
91 N9 0.5390 13.6620 -0.2270 N.pl3 1 UNK -0.4341
92 H37 -0.1470 14.3220 -0.5320 H 1 UNK 0.2039
93 H38 0.9350 13.8040 0.6790 H 1 UNK 0.2039
94 N10 0.3550 12.4450 -2.1890 N.ar 1 UNK -0.3418
95 C27 0.6830 11.4330 -2.9420 C.ar 1 UNK 0.1017
96 C28 0.0560 11.2850 -4.3120 C.3 1 UNK -0.1395
97 H39 -0.6350 12.1030 -4.5160 H 1 UNK 0.0847
98 H40 0.8300 11.2900 -5.0790 H 1 UNK 0.0847
99 H41 -0.4910 10.3460 -4.3750 H 1 UNK 0.0847
100 N11 1.5460 10.5400 -2.5470 N.ar 1 UNK -0.1379
101 C29 2.1310 10.6530 -1.3880 C.ar 1 UNK 0.1378
102 H36 2.8650 9.9140 -1.0750 H 1 UNK 0.2611
103 C30 4.9000 11.2470 0.8420 C.2 1 UNK 0.0626
104 C31 5.3240 12.5760 0.2270 C.3 1 UNK -0.1532
105 H42 6.3990 12.6570 0.0960 H 1 UNK 0.0997
106 H43 4.8560 12.6960 -0.7490 H 1 UNK 0.0997
107 H44 5.0030 13.4010 0.8610 H 1 UNK 0.0997
108 S2 4.8670 8.9100 1.9140 S.3 1 UNK 0.7281
109 C32 5.7200 10.2970 1.2850 C.2 1 UNK -0.3528
110 C33 7.2400 10.3620 1.3140 C.3 1 UNK -0.0741
111 H45 7.5830 11.3810 1.4880 H 1 UNK 0.0512
112 H46 7.5960 9.7700 2.1560 H 1 UNK 0.0512
113 C34 7.8950 9.8160 0.0380 C.3 1 UNK 0.0608
114 H47 8.9750 9.7580 0.1720 H 1 UNK 0.0830
115 H48 7.5070 8.8210 -0.1850 H 1 UNK 0.0830
116 O18 7.6070 10.7070 -1.0590 O.3 1 UNK -0.7620
117 P4 8.0540 10.3780 -2.5430 P.3 1 UNK 2.5781
118 O19 7.9600 11.6060 -3.4190 O.co2 1 UNK -1.2090
119 O20 9.4610 9.8260 -2.5450 O.co2 1 UNK -1.2090
120 O21 7.0050 9.2540 -2.9640 O.3 1 UNK -1.1635
121 P5 5.4330 9.3690 -2.7350 P.3 1 UNK 2.5471
122 O22 5.0910 8.7110 -1.4190 O.co2 1 UNK -1.1595
123 O23 4.7540 8.6400 -3.8690 O.co2 1 UNK -1.1595
124 O24 4.9780 10.8100 -2.7380 O.co2 1 UNK -1.1595
@BOND
1 1 2 2
2 2 3 1
3 2 4 1
4 2 5 1
5 5 6 1
6 6 8 1
7 6 29 1
8 6 7 1
9 8 10 1
10 8 12 1
11 8 9 1
12 10 11 1
13 12 14 1
14 12 28 1
15 12 13 1
16 14 15 ar
17 14 26 ar
18 15 16 ar
19 15 24 ar
20 16 17 ar
21 17 19 ar
22 17 18 1
23 19 20 ar
24 20 21 1
25 20 24 ar
26 21 22 1
27 21 23 1
28 24 25 ar
29 25 26 ar
30 26 27 1
31 28 29 1
32 29 31 1
33 29 30 1
34 31 32 1
35 31 34 1
36 31 33 1
37 34 35 1
38 35 36 1
39 35 37 2
40 35 38 1
41 38 39 1
42 39 40 1
43 39 41 2
44 39 42 1
45 42 43 1
46 43 44 1
47 43 45 1
48 43 46 1
49 46 47 1
50 46 51 1
51 46 55 1
52 47 48 1
53 47 49 1
54 47 50 1
55 51 52 1
56 51 53 1
57 51 54 1
58 55 56 1
59 55 57 1
60 55 59 1
61 57 58 1
62 59 60 2
63 59 61 am
64 61 62 1
65 61 63 1
66 63 64 1
67 63 65 1
68 63 66 1
69 66 67 1
70 66 68 1
71 66 69 1
72 69 70 2
73 69 71 am
74 71 72 1
75 71 73 1
76 73 74 1
77 73 75 1
78 73 76 1
79 76 77 1
80 76 78 1
81 76 79 1
82 79 80 1
83 80 81 1
84 80 82 1
85 80 84 1
86 82 83 1
87 84 85 2
88 84 108 1
89 85 86 1
90 85 103 1
91 86 87 1
92 86 88 1
93 86 89 1
94 89 90 ar
95 89 101 ar
96 90 91 1
97 90 94 ar
98 91 92 1
99 91 93 1
100 94 95 ar
101 95 96 1
102 95 100 ar
103 96 97 1
104 96 98 1
105 96 99 1
106 100 101 ar
107 101 102 1
108 103 104 1
109 103 109 2
110 104 105 1
111 104 106 1
112 104 107 1
113 108 109 1
114 109 110 1
115 110 111 1
116 110 112 1
117 110 113 1
118 113 114 1
119 113 115 1
120 113 116 1
121 116 117 1
122 117 118 2
123 117 119 1
124 117 120 1
125 120 121 1
126 121 122 2
127 121 123 1
128 121 124 1