@COMMENT
LIGANDBOX_ID = PDB_LIGAND-00016248-01
SOURCE = PDB_LIGAND
SUPPLIER = PDB_LIGAND
IDNUMBER = VDN
MOLECULAR_FORMULA = C23H33N6O4S
MOLECULAR_WEIGHT = 489.620
MOLECULAR_CHARGE = 1
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 6
HOMO = -10.8652
LUMO = -4.4413
NUM_OF_CHIRAL_ATOMS = 0
LOGS =
LOGP = 2.7028
NOTE =
@MOLECULE
PDB_LIGAND-00016248-01
67 70 0 0 0
SMALL
USER_CHARGES
@ATOM
1 C1 -5.6170 -0.2530 2.8790 C.3 1 UNK -0.2111
2 H1 -6.7040 -0.2430 2.8240 H 1 UNK 0.1012
3 H2 -5.2850 -1.2600 3.1310 H 1 UNK 0.1012
4 H3 -5.2950 0.4370 3.6570 H 1 UNK 0.1012
5 C2 -5.0290 0.1680 1.5280 C.3 1 UNK 0.0010
6 H4 -5.3680 1.1730 1.2760 H 1 UNK 0.0796
7 H5 -5.3470 -0.5320 0.7550 H 1 UNK 0.0796
8 O1 -3.5840 0.1570 1.6230 O.3 1 UNK -0.1963
9 C3 -2.7280 0.4400 0.5940 C.ar 1 UNK 0.2576
10 C4 -3.1770 0.8180 -0.6110 C.ar 1 UNK -0.2412
11 H6 -4.2370 0.8870 -0.8030 H 1 UNK 0.1534
12 C5 -2.3610 1.1510 -1.6010 C.ar 1 UNK 0.0182
13 H7 -2.7790 1.4480 -2.5520 H 1 UNK 0.1443
14 C6 -1.0480 1.1340 -1.4170 C.ar 1 UNK -0.7478
15 C7 -0.5740 0.7430 -0.2380 C.ar 1 UNK 0.0045
16 H8 0.4970 0.6940 -0.0940 H 1 UNK 0.1455
17 C8 -1.3880 0.3800 0.7600 C.ar 1 UNK -0.1007
18 S1 0.0440 1.6030 -2.7350 S.o2 1 UNK 2.5441
19 O2 -0.6840 2.5750 -3.6000 O.2 1 UNK -0.8298
20 O3 1.3800 1.9160 -2.1510 O.2 1 UNK -0.8298
21 C9 2.6970 -3.0330 -7.0230 C.3 1 UNK -0.2367
22 H9 3.0860 -3.2530 -8.0160 H 1 UNK 0.1143
23 H10 3.5340 -2.8030 -6.3660 H 1 UNK 0.1143
24 H11 2.1750 -3.9120 -6.6470 H 1 UNK 0.1143
25 N1 0.1930 0.1530 -3.6340 N.pl3 1 UNK -0.8087
26 C10 1.2900 -0.8000 -3.4050 C.3 1 UNK -0.0182
27 H12 2.0030 -0.4090 -2.6810 H 1 UNK 0.1304
28 H13 0.8780 -1.7310 -3.0130 H 1 UNK 0.1304
29 C11 2.0110 -1.0760 -4.7330 C.3 1 UNK -0.1340
30 H14 2.7770 -1.8560 -4.5820 H 1 UNK 0.1485
31 H15 2.4830 -0.1470 -5.0960 H 1 UNK 0.1485
32 N2 1.0450 -1.5500 -5.7940 N.4 1 UNK -0.0163
33 H33 0.6070 -2.4220 -5.4620 H 1 UNK 0.2400
34 C12 -0.0470 -0.5270 -5.9870 C.3 1 UNK -0.1340
35 H16 -0.7600 -0.9170 -6.7320 H 1 UNK 0.1485
36 H17 0.4220 0.3990 -6.3620 H 1 UNK 0.1485
37 C13 -0.7820 -0.2300 -4.6690 C.3 1 UNK -0.0182
38 H18 -1.3180 -1.1210 -4.3420 H 1 UNK 0.1304
39 H19 -1.5070 0.5670 -4.8320 H 1 UNK 0.1304
40 C14 1.7310 -1.8420 -7.1050 C.3 1 UNK -0.1214
41 H20 0.9450 -2.0750 -7.8430 H 1 UNK 0.1417
42 H21 2.2780 -0.9360 -7.4180 H 1 UNK 0.1417
43 C15 -0.8090 -0.0050 1.9000 C.2 1 UNK 0.2253
44 N3 -1.2610 -1.0720 2.5010 N.2 1 UNK -0.2802
45 C16 -0.7040 -1.6090 3.7060 C.2 1 UNK 0.3432
46 C17 0.5040 -0.9340 4.2140 C.ar 1 UNK -0.2142
47 N4 0.9900 0.0990 3.5070 N.ar 1 UNK -0.0153
48 N5 0.3550 0.5820 2.3470 N.pl3 1 UNK -0.2805
49 H22 0.7930 1.3080 1.8170 H 1 UNK 0.2682
50 O4 -1.2490 -2.5920 4.2760 O.2 1 UNK -0.2686
51 C18 1.2590 -1.0940 5.2960 C.ar 1 UNK -0.0059
52 N6 2.1990 -0.1880 5.2690 N.ar 1 UNK -0.1374
53 C19 2.0500 0.5560 4.2180 C.ar 1 UNK -0.0166
54 C20 1.0900 -2.1370 6.3850 C.3 1 UNK -0.1427
55 H23 0.7820 -1.6550 7.3120 H 1 UNK 0.1000
56 H24 0.3610 -2.8980 6.1240 H 1 UNK 0.1000
57 H25 2.0440 -2.6310 6.5680 H 1 UNK 0.1000
58 C21 2.9410 1.6690 3.7090 C.3 1 UNK -0.0858
59 H26 2.3510 2.3520 3.0990 H 1 UNK 0.1027
60 H27 3.3290 2.2290 4.5600 H 1 UNK 0.1027
61 C22 4.1160 1.1300 2.8780 C.3 1 UNK -0.1599
62 H28 4.6780 0.4060 3.4690 H 1 UNK 0.0857
63 H29 3.7330 0.6260 1.9910 H 1 UNK 0.0857
64 C23 5.0590 2.2640 2.4510 C.3 1 UNK -0.2110
65 H30 5.8750 1.8570 1.8550 H 1 UNK 0.0785
66 H31 4.5190 2.9990 1.8550 H 1 UNK 0.0785
67 H32 5.4780 2.7540 3.3290 H 1 UNK 0.0785
@BOND
1 1 5 1
2 1 2 1
3 1 3 1
4 1 4 1
5 5 8 1
6 5 6 1
7 5 7 1
8 8 9 1
9 9 10 ar
10 9 17 ar
11 10 12 ar
12 10 11 1
13 12 14 ar
14 12 13 1
15 14 15 ar
16 14 18 1
17 15 17 ar
18 15 16 1
19 17 43 1
20 18 19 2
21 18 20 2
22 18 25 1
23 21 40 1
24 21 22 1
25 21 23 1
26 21 24 1
27 25 26 1
28 25 37 1
29 26 29 1
30 26 27 1
31 26 28 1
32 29 32 1
33 29 30 1
34 29 31 1
35 32 34 1
36 32 40 1
37 34 37 1
38 34 35 1
39 34 36 1
40 37 38 1
41 37 39 1
42 40 41 1
43 40 42 1
44 43 44 2
45 43 48 1
46 44 45 1
47 45 46 1
48 45 50 2
49 46 47 ar
50 46 51 ar
51 47 48 1
52 47 53 ar
53 48 49 1
54 51 52 ar
55 51 54 1
56 52 53 ar
57 53 58 1
58 54 55 1
59 54 56 1
60 54 57 1
61 58 61 1
62 58 59 1
63 58 60 1
64 61 64 1
65 61 62 1
66 61 63 1
67 64 65 1
68 64 66 1
69 64 67 1
70 32 33 1