@COMMENT
LIGANDBOX_ID = PDB_LIGAND-00016309-01
SOURCE = PDB_LIGAND
SUPPLIER = PDB_LIGAND
IDNUMBER = VLB
MOLECULAR_FORMULA = C46H60N4O9
MOLECULAR_WEIGHT = 813.005
MOLECULAR_CHARGE = 2
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 9
HOMO = -13.0890
LUMO = -5.1805
NUM_OF_CHIRAL_ATOMS = 11
LOGS = -7.2060
LOGP = 4.0225
NOTE =
@MOLECULE
PDB_LIGAND-00016309-01
119 127 0 0 0
SMALL
USER_CHARGES
@ATOM
1 C1 6.1020 3.5600 3.1320 C.3 1 UNK -0.2196
2 H1 6.5060 4.5600 2.9800 H 1 UNK 0.0912
3 H2 5.7690 3.4790 4.1660 H 1 UNK 0.0912
4 H3 6.8870 2.8240 2.9710 H 1 UNK 0.0912
5 C2 4.9070 3.3070 2.1960 C.3 1 UNK -0.2048
6 H4 4.5340 2.3060 2.4040 H 1 UNK 0.0982
7 H5 4.1180 4.0080 2.4700 H 1 UNK 0.0982
8 C3 5.2080 3.4550 0.6770 C.3 1 UNK 0.0792
9 O1 5.7190 4.7720 0.4370 O.3 1 UNK -0.2974
10 H6 6.4970 4.9190 0.9790 H 1 UNK 0.2305
11 C4 6.3170 2.4290 0.2350 C.3 1 UNK -0.1445
12 H7 6.7950 2.7800 -0.6950 H 1 UNK 0.1469
13 H8 7.0770 2.3060 1.0230 H 1 UNK 0.1469
14 C5 3.8470 3.3190 -0.1200 C.3 1 UNK -0.1421
15 H9 3.0370 3.8140 0.4170 H 1 UNK 0.1189
16 H10 3.9350 3.8030 -1.0940 H 1 UNK 0.1189
17 C6 3.4990 1.8270 -0.3200 C.3 1 UNK -0.1479
18 H11 3.4840 1.4050 0.6840 H 1 UNK 0.1033
19 C7 2.2290 1.2520 -0.9670 C.3 1 UNK -0.1266
20 H12 1.4210 1.5620 -0.3040 H 1 UNK 0.1035
21 H13 2.0630 1.7390 -1.9280 H 1 UNK 0.1035
22 C8 4.6960 1.3520 -1.1080 C.3 1 UNK -0.1366
23 H14 4.4750 0.4350 -1.6560 H 1 UNK 0.1538
24 H15 5.0700 2.1210 -1.8060 H 1 UNK 0.1538
25 N1 5.6940 1.0900 -0.0580 N.4 1 UNK -0.0119
26 H59 5.1620 0.8430 0.7900 H 1 UNK 0.2491
27 C9 6.4770 -0.1520 -0.3690 C.3 1 UNK -0.1072
28 H16 7.1010 0.0280 -1.2610 H 1 UNK 0.1408
29 H17 7.1120 -0.3710 0.5060 H 1 UNK 0.1408
30 C10 5.4980 -1.3430 -0.6210 C.3 1 UNK -0.1068
31 H18 5.2050 -1.3350 -1.6650 H 1 UNK 0.1221
32 H19 6.0550 -2.2710 -0.5000 H 1 UNK 0.1221
33 C11 4.2580 -1.3610 0.3040 C.ar 1 UNK -0.1907
34 C12 4.3440 -1.7480 1.5750 C.ar 1 UNK -0.0871
35 C13 5.3830 -2.2110 2.2700 C.ar 1 UNK -0.1097
36 H20 6.3550 -2.3350 1.8160 H 1 UNK 0.1280
37 C14 5.2130 -2.5240 3.5570 C.ar 1 UNK -0.1245
38 H21 6.0460 -2.9030 4.1300 H 1 UNK 0.1476
39 C15 4.0210 -2.3740 4.1420 C.ar 1 UNK -0.0878
40 H22 3.8970 -2.6310 5.1840 H 1 UNK 0.1503
41 C16 2.9840 -1.9060 3.4470 C.ar 1 UNK -0.1433
42 H23 2.0170 -1.7740 3.9100 H 1 UNK 0.1399
43 C17 3.1750 -1.6010 2.1700 C.ar 1 UNK 0.0080
44 N2 2.3010 -1.1050 1.2590 N.ar 1 UNK -0.1869
45 H24 1.3290 -0.9180 1.4070 H 1 UNK 0.2623
46 C18 2.9850 -0.9650 0.0820 C.ar 1 UNK 0.0111
47 C19 2.1980 -0.3380 -1.1080 C.3 1 UNK 0.0743
48 C20 2.7440 -0.7930 -2.4720 C.2 1 UNK 0.3005
49 O2 2.9630 -0.0270 -3.4520 O.2 1 UNK -0.3643
50 O3 2.9510 -2.1360 -2.5270 O.3 1 UNK -0.2337
51 C21 3.4380 -2.7600 -3.7370 C.3 1 UNK -0.0590
52 H25 3.5380 -3.8320 -3.5680 H 1 UNK 0.1004
53 H26 2.7300 -2.5860 -4.5480 H 1 UNK 0.1004
54 H27 4.4100 -2.3420 -3.9990 H 1 UNK 0.1004
55 C22 0.7240 -0.8760 -1.0940 C.ar 1 UNK -0.1721
56 C23 -0.2570 -0.0500 -1.5000 C.ar 1 UNK -0.0456
57 H28 -0.0560 0.9420 -1.8650 H 1 UNK 0.1180
58 C24 -1.5220 -0.4380 -1.4640 C.ar 1 UNK -0.2237
59 C25 -2.7500 0.3850 -1.7940 C.3 1 UNK -0.0119
60 C26 -2.7410 1.6810 -0.9300 C.3 1 UNK -0.0477
61 H29 -1.6920 1.7490 -0.5970 H 1 UNK 0.1188
62 C27 -2.7310 0.9010 -3.2550 C.3 1 UNK -0.1682
63 H30 -3.7370 0.9050 -3.6750 H 1 UNK 0.1396
64 H31 -2.0740 0.3140 -3.8960 H 1 UNK 0.1396
65 C28 -2.2540 2.3490 -3.1340 C.3 1 UNK -0.1257
66 H32 -2.5890 2.9680 -3.9830 H 1 UNK 0.1424
67 H33 -1.1560 2.3710 -3.0370 H 1 UNK 0.1424
68 N3 -2.8350 2.8630 -1.8570 N.4 1 UNK -0.0074
69 H60 -2.2670 3.6420 -1.4920 H 1 UNK 0.2483
70 C29 -4.2420 3.3460 -2.0580 C.3 1 UNK -0.0833
71 H34 -4.8180 2.5470 -2.5540 H 1 UNK 0.1558
72 H35 -4.2120 4.2480 -2.6920 H 1 UNK 0.1558
73 C30 -4.8710 3.6720 -0.7270 C.2 1 UNK -0.2029
74 H36 -5.5860 4.4790 -0.6630 H 1 UNK 0.1811
75 C31 -4.5910 2.9680 0.3590 C.2 1 UNK -0.1087
76 H37 -5.1050 3.2400 1.2690 H 1 UNK 0.1763
77 C32 -3.5940 1.7990 0.3790 C.3 1 UNK -0.0056
78 C33 -2.4940 2.0790 1.4520 C.3 1 UNK -0.1578
79 H38 -1.8090 1.2310 1.4890 H 1 UNK 0.0776
80 H39 -1.9110 2.9420 1.1260 H 1 UNK 0.0776
81 C34 -2.9350 2.3820 2.8960 C.3 1 UNK -0.2080
82 H40 -3.4260 1.5260 3.3460 H 1 UNK 0.0921
83 H41 -2.0550 2.6090 3.4960 H 1 UNK 0.0921
84 H42 -3.5960 3.2460 2.9350 H 1 UNK 0.0921
85 C35 -4.3090 0.4430 0.6870 C.3 1 UNK 0.0433
86 H43 -3.5590 -0.2540 1.0650 H 1 UNK 0.1464
87 O4 -5.3320 0.6450 1.7090 O.3 1 UNK -0.2840
88 C36 -5.4070 -0.1180 2.8340 C.2 1 UNK 0.3041
89 C37 -6.6530 0.2160 3.6210 C.3 1 UNK -0.2077
90 H44 -7.5330 -0.0260 3.0260 H 1 UNK 0.1238
91 H45 -6.6720 -0.3590 4.5460 H 1 UNK 0.1238
92 H46 -6.6640 1.2800 3.8560 H 1 UNK 0.1238
93 O5 -4.5540 -0.9800 3.1860 O.2 1 UNK -0.3336
94 C38 -4.9800 -0.2210 -0.5510 C.3 1 UNK 0.0975
95 C39 -5.8830 -1.4020 -0.1780 C.2 1 UNK 0.2700
96 O6 -7.0640 -1.5620 -0.6010 O.2 1 UNK -0.3138
97 O7 -5.2710 -2.2740 0.6650 O.3 1 UNK -0.2504
98 C40 -5.9870 -3.4320 1.1520 C.3 1 UNK -0.0578
99 H47 -5.3370 -3.9980 1.8190 H 1 UNK 0.1006
100 H48 -6.8730 -3.1070 1.6990 H 1 UNK 0.1006
101 H49 -6.2820 -4.0600 0.3110 H 1 UNK 0.1006
102 O8 -5.8290 0.7360 -1.2060 O.3 1 UNK -0.3328
103 H50 -6.5580 0.9620 -0.6230 H 1 UNK 0.2491
104 C41 -3.9080 -0.6480 -1.5820 C.3 1 UNK 0.0440
105 H51 -4.4040 -0.8480 -2.5340 H 1 UNK 0.1361
106 N4 -3.1790 -1.8630 -1.1800 N.pl3 1 UNK -0.2628
107 C42 -3.6900 -3.1110 -1.7480 C.3 1 UNK -0.0844
108 H52 -3.5920 -3.9090 -1.0120 H 1 UNK 0.0973
109 H53 -4.7400 -3.0150 -2.0250 H 1 UNK 0.0973
110 H54 -3.1140 -3.3730 -2.6370 H 1 UNK 0.0973
111 C43 -1.8340 -1.6460 -1.0870 C.ar 1 UNK 0.1647
112 C44 -0.8860 -2.5020 -0.7370 C.ar 1 UNK -0.2548
113 H55 -1.1890 -3.5030 -0.4730 H 1 UNK 0.1640
114 C45 0.4110 -2.1500 -0.7310 C.ar 1 UNK 0.2003
115 O9 1.3660 -3.0750 -0.4180 O.3 1 UNK -0.2231
116 C46 1.1290 -4.3190 0.2840 C.3 1 UNK -0.0457
117 H56 0.5090 -4.9760 -0.3260 H 1 UNK 0.0968
118 H57 2.0870 -4.8040 0.4700 H 1 UNK 0.0968
119 H58 0.6370 -4.1130 1.2340 H 1 UNK 0.0968
@BOND
1 1 5 1
2 1 2 1
3 1 3 1
4 1 4 1
5 5 8 1
6 5 6 1
7 5 7 1
8 8 9 1
9 8 11 1
10 8 14 1
11 9 10 1
12 11 25 1
13 11 12 1
14 11 13 1
15 14 17 1
16 14 15 1
17 14 16 1
18 17 19 1
19 17 22 1
20 17 18 1
21 19 47 1
22 19 20 1
23 19 21 1
24 22 25 1
25 22 23 1
26 22 24 1
27 25 27 1
28 27 30 1
29 27 28 1
30 27 29 1
31 30 33 1
32 30 31 1
33 30 32 1
34 33 34 ar
35 33 46 ar
36 34 35 ar
37 34 43 ar
38 35 37 ar
39 35 36 1
40 37 39 ar
41 37 38 1
42 39 41 ar
43 39 40 1
44 41 43 ar
45 41 42 1
46 43 44 ar
47 44 46 ar
48 44 45 1
49 46 47 1
50 47 48 1
51 47 55 1
52 48 49 2
53 48 50 1
54 50 51 1
55 51 52 1
56 51 53 1
57 51 54 1
58 55 56 ar
59 55 114 ar
60 56 58 ar
61 56 57 1
62 58 59 1
63 58 111 ar
64 59 60 1
65 59 62 1
66 59 104 1
67 60 68 1
68 60 77 1
69 60 61 1
70 62 65 1
71 62 63 1
72 62 64 1
73 65 68 1
74 65 66 1
75 65 67 1
76 68 70 1
77 70 73 1
78 70 71 1
79 70 72 1
80 73 75 2
81 73 74 1
82 75 77 1
83 75 76 1
84 77 78 1
85 77 85 1
86 78 81 1
87 78 79 1
88 78 80 1
89 81 82 1
90 81 83 1
91 81 84 1
92 85 87 1
93 85 94 1
94 85 86 1
95 87 88 1
96 88 89 1
97 88 93 2
98 89 90 1
99 89 91 1
100 89 92 1
101 94 95 1
102 94 102 1
103 94 104 1
104 95 96 2
105 95 97 1
106 97 98 1
107 98 99 1
108 98 100 1
109 98 101 1
110 102 103 1
111 104 106 1
112 104 105 1
113 106 107 1
114 106 111 1
115 107 108 1
116 107 109 1
117 107 110 1
118 111 112 ar
119 112 114 ar
120 112 113 1
121 114 115 1
122 115 116 1
123 116 117 1
124 116 118 1
125 116 119 1
126 25 26 1
127 68 69 1