@COMMENT
LIGANDBOX_ID = PDB_LIGAND-00016309-02
SOURCE = PDB_LIGAND
SUPPLIER = PDB_LIGAND
IDNUMBER = VLB
MOLECULAR_FORMULA = C46H60N4O9
MOLECULAR_WEIGHT = 813.005
MOLECULAR_CHARGE = 2
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 9
HOMO = -13.0890
LUMO = -5.1805
NUM_OF_CHIRAL_ATOMS = 11
LOGS = -7.2060
LOGP = 4.0225
NOTE =
@MOLECULE
PDB_LIGAND-00016309-02
119 127 0 0 0
SMALL
USER_CHARGES
@ATOM
1 C1 4.8650 6.0020 1.0360 C.3 1 UNK -0.2196
2 H1 4.5560 5.8260 2.0660 H 1 UNK 0.0912
3 H2 5.3730 6.9650 0.9900 H 1 UNK 0.0912
4 H3 3.9820 6.0550 0.4000 H 1 UNK 0.0912
5 C2 5.8220 4.8940 0.5570 C.3 1 UNK -0.2048
6 H4 6.0970 5.1060 -0.4760 H 1 UNK 0.0982
7 H5 6.7330 4.9480 1.1540 H 1 UNK 0.0982
8 C3 5.2460 3.4610 0.6440 C.3 1 UNK 0.0792
9 O1 5.0140 3.1320 2.0170 O.3 1 UNK -0.2974
10 H6 4.5700 3.8610 2.4630 H 1 UNK 0.2305
11 C4 6.3540 2.4530 0.1750 C.3 1 UNK -0.1445
12 H7 6.8040 2.7930 -0.7740 H 1 UNK 0.1469
13 H8 7.1300 2.3640 0.9560 H 1 UNK 0.1469
14 C5 3.8650 3.3330 -0.1140 C.3 1 UNK -0.1421
15 H9 3.0760 3.8250 0.4560 H 1 UNK 0.1189
16 H10 3.9240 3.8170 -1.0910 H 1 UNK 0.1189
17 C6 3.5090 1.8390 -0.2880 C.3 1 UNK -0.1479
18 H11 3.5070 1.4330 0.7260 H 1 UNK 0.1033
19 C7 2.2220 1.2700 -0.9150 C.3 1 UNK -0.1266
20 H12 1.4220 1.5690 -0.2380 H 1 UNK 0.1035
21 H13 2.0410 1.7650 -1.8690 H 1 UNK 0.1035
22 C8 4.6960 1.3480 -1.0840 C.3 1 UNK -0.1366
23 H14 4.4700 0.4230 -1.6140 H 1 UNK 0.1538
24 H15 5.0520 2.1010 -1.8100 H 1 UNK 0.1538
25 N1 5.7220 1.1040 -0.0510 N.4 1 UNK -0.0119
26 H59 5.2180 0.8920 0.8280 H 1 UNK 0.2491
27 C9 6.4870 -0.1580 -0.3610 C.3 1 UNK -0.1072
28 H16 7.1090 0.0020 -1.2590 H 1 UNK 0.1408
29 H17 7.1300 -0.3810 0.5090 H 1 UNK 0.1408
30 C10 5.4940 -1.3450 -0.5960 C.3 1 UNK -0.1068
31 H18 5.1970 -1.3530 -1.6400 H 1 UNK 0.1221
32 H19 6.0420 -2.2780 -0.4670 H 1 UNK 0.1221
33 C11 4.2580 -1.3420 0.3350 C.ar 1 UNK -0.1907
34 C12 4.3500 -1.7230 1.6070 C.ar 1 UNK -0.0871
35 C13 5.3820 -2.2170 2.2920 C.ar 1 UNK -0.1097
36 H20 6.3450 -2.3760 1.8310 H 1 UNK 0.1280
37 C14 5.2110 -2.5360 3.5770 C.ar 1 UNK -0.1245
38 H21 6.0370 -2.9420 4.1440 H 1 UNK 0.1476
39 C15 4.0250 -2.3660 4.1690 C.ar 1 UNK -0.0878
40 H22 3.9000 -2.6350 5.2090 H 1 UNK 0.1503
41 C16 2.9960 -1.8710 3.4830 C.ar 1 UNK -0.1433
42 H23 2.0320 -1.7310 3.9500 H 1 UNK 0.1399
43 C17 3.1880 -1.5530 2.2100 C.ar 1 UNK 0.0080
44 N2 2.3140 -1.0400 1.3070 N.ar 1 UNK -0.1869
45 H24 1.3190 -1.0420 1.4120 H 1 UNK 0.2623
46 C18 2.9840 -0.9400 0.1180 C.ar 1 UNK 0.0111
47 C19 2.1890 -0.3180 -1.0720 C.3 1 UNK 0.0743
48 C20 2.7400 -0.7530 -2.4400 C.2 1 UNK 0.3005
49 O2 2.9800 0.0380 -3.3950 O.2 1 UNK -0.3643
50 O3 2.9490 -2.0900 -2.5250 O.3 1 UNK -0.2337
51 C21 3.4060 -2.6980 -3.7570 C.3 1 UNK -0.0590
52 H25 3.5070 -3.7740 -3.6070 H 1 UNK 0.1004
53 H26 2.6800 -2.5130 -4.5500 H 1 UNK 0.1004
54 H27 4.3730 -2.2820 -4.0400 H 1 UNK 0.1004
55 C22 0.7130 -0.8500 -1.0710 C.ar 1 UNK -0.1721
56 C23 -0.2660 -0.0290 -1.4970 C.ar 1 UNK -0.0456
57 H28 -0.0600 0.9600 -1.8680 H 1 UNK 0.1180
58 C24 -1.5320 -0.4250 -1.4810 C.ar 1 UNK -0.2237
59 C25 -2.7730 0.3830 -1.8210 C.3 1 UNK -0.0119
60 C26 -2.7810 1.6930 -0.9790 C.3 1 UNK -0.0477
61 H29 -1.7280 1.7930 -0.6710 H 1 UNK 0.1188
62 C27 -2.7760 0.8760 -3.2920 C.3 1 UNK -0.1682
63 H30 -3.7800 0.8260 -3.7150 H 1 UNK 0.1396
64 H31 -2.0950 0.3040 -3.9230 H 1 UNK 0.1396
65 C28 -2.3670 2.3490 -3.2060 C.3 1 UNK -0.1257
66 H32 -2.7490 2.9320 -4.0620 H 1 UNK 0.1424
67 H33 -1.2670 2.4190 -3.1450 H 1 UNK 0.1424
68 N3 -2.9380 2.8630 -1.9210 N.4 1 UNK -0.0074
69 H60 -2.3900 3.6670 -1.5750 H 1 UNK 0.2483
70 C29 -4.3640 3.3100 -2.0800 C.3 1 UNK -0.0833
71 H34 -4.9510 2.4890 -2.5270 H 1 UNK 0.1558
72 H35 -4.3890 4.1970 -2.7360 H 1 UNK 0.1558
73 C30 -4.9300 3.6590 -0.7250 C.2 1 UNK -0.2029
74 H36 -5.6460 4.4650 -0.6380 H 1 UNK 0.1811
75 C31 -4.5930 2.9750 0.3590 C.2 1 UNK -0.1087
76 H37 -5.0680 3.2600 1.2880 H 1 UNK 0.1763
77 C32 -3.6020 1.7990 0.3520 C.3 1 UNK -0.0056
78 C33 -2.4770 2.0670 1.4020 C.3 1 UNK -0.1578
79 H38 -1.7840 1.2240 1.4060 H 1 UNK 0.0776
80 H39 -1.9100 2.9430 1.0830 H 1 UNK 0.0776
81 C34 -2.8810 2.3310 2.8640 C.3 1 UNK -0.2080
82 H40 -3.3310 1.4520 3.3130 H 1 UNK 0.0921
83 H41 -1.9910 2.5730 3.4430 H 1 UNK 0.0921
84 H42 -3.5670 3.1720 2.9430 H 1 UNK 0.0921
85 C35 -4.3200 0.4450 0.6750 C.3 1 UNK 0.0433
86 H43 -3.5760 -0.2560 1.0580 H 1 UNK 0.1464
87 O4 -5.3400 0.6710 1.6960 O.3 1 UNK -0.2840
88 C36 -5.4110 -0.0850 2.8250 C.2 1 UNK 0.3041
89 C37 -6.6610 0.2330 3.6130 C.3 1 UNK -0.2077
90 H44 -7.5370 -0.0010 3.0110 H 1 UNK 0.1238
91 H45 -6.6810 -0.3580 4.5270 H 1 UNK 0.1238
92 H46 -6.6740 1.2920 3.8650 H 1 UNK 0.1238
93 O5 -4.5410 -0.9270 3.1780 O.2 1 UNK -0.3336
94 C38 -4.9930 -0.2240 -0.5580 C.3 1 UNK 0.0975
95 C39 -5.8860 -1.4060 -0.1640 C.2 1 UNK 0.2700
96 O6 -7.0770 -1.5590 -0.5560 O.2 1 UNK -0.3138
97 O7 -5.2590 -2.2810 0.6640 O.3 1 UNK -0.2504
98 C40 -5.9700 -3.4360 1.1690 C.3 1 UNK -0.0578
99 H47 -5.3090 -4.0070 1.8210 H 1 UNK 0.1006
100 H48 -6.8420 -3.1100 1.7380 H 1 UNK 0.1006
101 H49 -6.2900 -4.0640 0.3370 H 1 UNK 0.1006
102 O8 -5.8320 0.7380 -1.2270 O.3 1 UNK -0.3328
103 H50 -6.7040 0.7130 -0.8190 H 1 UNK 0.2491
104 C41 -3.9250 -0.6550 -1.5930 C.3 1 UNK 0.0440
105 H51 -4.4340 -0.8680 -2.5350 H 1 UNK 0.1361
106 N4 -3.1790 -1.8600 -1.1980 N.pl3 1 UNK -0.2628
107 C42 -3.6910 -3.1210 -1.7430 C.3 1 UNK -0.0844
108 H52 -3.5970 -3.9060 -0.9910 H 1 UNK 0.0973
109 H53 -4.7420 -3.0330 -2.0220 H 1 UNK 0.0973
110 H54 -3.1160 -3.4050 -2.6250 H 1 UNK 0.0973
111 C43 -1.8380 -1.6340 -1.1030 C.ar 1 UNK 0.1647
112 C44 -0.8920 -2.4840 -0.7340 C.ar 1 UNK -0.2548
113 H55 -1.1920 -3.4850 -0.4670 H 1 UNK 0.1640
114 C45 0.4010 -2.1230 -0.7080 C.ar 1 UNK 0.2003
115 O9 1.3590 -3.0340 -0.3690 O.3 1 UNK -0.2231
116 C46 1.1210 -4.3080 0.2820 C.3 1 UNK -0.0457
117 H56 0.5380 -4.9580 -0.3700 H 1 UNK 0.0968
118 H57 2.0810 -4.7820 0.4900 H 1 UNK 0.0968
119 H58 0.5910 -4.1470 1.2220 H 1 UNK 0.0968
@BOND
1 1 5 1
2 1 2 1
3 1 3 1
4 1 4 1
5 5 8 1
6 5 6 1
7 5 7 1
8 8 9 1
9 8 11 1
10 8 14 1
11 9 10 1
12 11 25 1
13 11 12 1
14 11 13 1
15 14 17 1
16 14 15 1
17 14 16 1
18 17 19 1
19 17 22 1
20 17 18 1
21 19 47 1
22 19 20 1
23 19 21 1
24 22 25 1
25 22 23 1
26 22 24 1
27 25 27 1
28 27 30 1
29 27 28 1
30 27 29 1
31 30 33 1
32 30 31 1
33 30 32 1
34 33 34 ar
35 33 46 ar
36 34 35 ar
37 34 43 ar
38 35 37 ar
39 35 36 1
40 37 39 ar
41 37 38 1
42 39 41 ar
43 39 40 1
44 41 43 ar
45 41 42 1
46 43 44 ar
47 44 46 ar
48 44 45 1
49 46 47 1
50 47 48 1
51 47 55 1
52 48 49 2
53 48 50 1
54 50 51 1
55 51 52 1
56 51 53 1
57 51 54 1
58 55 56 ar
59 55 114 ar
60 56 58 ar
61 56 57 1
62 58 59 1
63 58 111 ar
64 59 60 1
65 59 62 1
66 59 104 1
67 60 68 1
68 60 77 1
69 60 61 1
70 62 65 1
71 62 63 1
72 62 64 1
73 65 68 1
74 65 66 1
75 65 67 1
76 68 70 1
77 70 73 1
78 70 71 1
79 70 72 1
80 73 75 2
81 73 74 1
82 75 77 1
83 75 76 1
84 77 78 1
85 77 85 1
86 78 81 1
87 78 79 1
88 78 80 1
89 81 82 1
90 81 83 1
91 81 84 1
92 85 87 1
93 85 94 1
94 85 86 1
95 87 88 1
96 88 89 1
97 88 93 2
98 89 90 1
99 89 91 1
100 89 92 1
101 94 95 1
102 94 102 1
103 94 104 1
104 95 96 2
105 95 97 1
106 97 98 1
107 98 99 1
108 98 100 1
109 98 101 1
110 102 103 1
111 104 106 1
112 104 105 1
113 106 107 1
114 106 111 1
115 107 108 1
116 107 109 1
117 107 110 1
118 111 112 ar
119 112 114 ar
120 112 113 1
121 114 115 1
122 115 116 1
123 116 117 1
124 116 118 1
125 116 119 1
126 25 26 1
127 68 69 1