@COMMENT
LIGANDBOX_ID = PDB_LIGAND-00016309-04
SOURCE = PDB_LIGAND
SUPPLIER = PDB_LIGAND
IDNUMBER = VLB
MOLECULAR_FORMULA = C46H60N4O9
MOLECULAR_WEIGHT = 813.005
MOLECULAR_CHARGE = 2
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 9
HOMO = -13.0890
LUMO = -5.1805
NUM_OF_CHIRAL_ATOMS = 11
LOGS = -7.2060
LOGP = 4.0225
NOTE =
@MOLECULE
PDB_LIGAND-00016309-04
119 127 0 0 0
SMALL
USER_CHARGES
@ATOM
1 C1 6.3320 3.5560 3.1530 C.3 1 UNK -0.2196
2 H1 6.7750 4.5280 2.9440 H 1 UNK 0.0912
3 H2 6.0360 3.5360 4.2010 H 1 UNK 0.0912
4 H3 7.0770 2.7780 2.9980 H 1 UNK 0.0912
5 C2 5.0900 3.3210 2.2720 C.3 1 UNK -0.2048
6 H4 4.6760 2.3480 2.5300 H 1 UNK 0.0982
7 H5 4.3470 4.0700 2.5480 H 1 UNK 0.0982
8 C3 5.3390 3.4010 0.7400 C.3 1 UNK 0.0792
9 O1 5.8700 4.6880 0.4230 O.3 1 UNK -0.2974
10 H6 6.5160 4.9670 1.0790 H 1 UNK 0.2305
11 C4 6.4150 2.3430 0.2910 C.3 1 UNK -0.1445
12 H7 6.8900 2.6880 -0.6440 H 1 UNK 0.1469
13 H8 7.1860 2.2110 1.0670 H 1 UNK 0.1469
14 C5 3.9470 3.2900 -0.0050 C.3 1 UNK -0.1421
15 H9 3.1670 3.7950 0.5650 H 1 UNK 0.1189
16 H10 4.0040 3.7840 -0.9770 H 1 UNK 0.1189
17 C6 3.5600 1.8080 -0.2090 C.3 1 UNK -0.1479
18 H11 3.5510 1.3800 0.7940 H 1 UNK 0.1033
19 C7 2.2640 1.2780 -0.8550 C.3 1 UNK -0.1266
20 H12 1.4650 1.5730 -0.1740 H 1 UNK 0.1035
21 H13 2.0950 1.8010 -1.7960 H 1 UNK 0.1035
22 C8 4.7400 1.3210 -1.0200 C.3 1 UNK -0.1366
23 H14 4.4980 0.4190 -1.5840 H 1 UNK 0.1538
24 H15 5.1150 2.0920 -1.7160 H 1 UNK 0.1538
25 N1 5.7560 1.0170 0.0070 N.4 1 UNK -0.0119
26 H59 5.2420 0.7660 0.8680 H 1 UNK 0.2491
27 C9 6.5000 -0.2420 -0.3560 C.3 1 UNK -0.1072
28 H16 7.1080 -0.0620 -1.2600 H 1 UNK 0.1408
29 H17 7.1540 -0.5030 0.4940 H 1 UNK 0.1408
30 C10 5.4840 -1.4060 -0.6100 C.3 1 UNK -0.1068
31 H18 5.1820 -1.3840 -1.6520 H 1 UNK 0.1221
32 H19 6.0130 -2.3530 -0.5020 H 1 UNK 0.1221
33 C11 4.2540 -1.3930 0.3280 C.ar 1 UNK -0.1907
34 C12 4.3510 -1.7690 1.6010 C.ar 1 UNK -0.0871
35 C13 5.3810 -2.2770 2.2800 C.ar 1 UNK -0.1097
36 H20 6.3350 -2.4600 1.8080 H 1 UNK 0.1280
37 C14 5.2190 -2.5780 3.5700 C.ar 1 UNK -0.1245
38 H21 6.0440 -2.9960 4.1320 H 1 UNK 0.1476
39 C15 4.0450 -2.3770 4.1740 C.ar 1 UNK -0.0878
40 H22 3.9260 -2.6320 5.2180 H 1 UNK 0.1503
41 C16 3.0170 -1.8680 3.4950 C.ar 1 UNK -0.1433
42 H23 2.0620 -1.7020 3.9720 H 1 UNK 0.1399
43 C17 3.2000 -1.5690 2.2160 C.ar 1 UNK 0.0080
44 N2 2.3270 -1.0440 1.3200 N.ar 1 UNK -0.1869
45 H24 1.3330 -1.0310 1.4320 H 1 UNK 0.2623
46 C18 2.9880 -0.9630 0.1230 C.ar 1 UNK 0.0111
47 C19 2.2030 -0.3040 -1.0530 C.3 1 UNK 0.0743
48 C20 2.7490 -0.7140 -2.4310 C.2 1 UNK 0.3005
49 O2 3.0080 0.0960 -3.3640 O.2 1 UNK -0.3643
50 O3 2.9250 -2.0530 -2.5510 O.3 1 UNK -0.2337
51 C21 3.3640 -2.6380 -3.8010 C.3 1 UNK -0.0590
52 H25 3.4430 -3.7200 -3.6800 H 1 UNK 0.1004
53 H26 2.6390 -2.4170 -4.5850 H 1 UNK 0.1004
54 H27 4.3390 -2.2350 -4.0780 H 1 UNK 0.1004
55 C22 0.7210 -0.8170 -1.0740 C.ar 1 UNK -0.1721
56 C23 -0.2420 0.0250 -1.4980 C.ar 1 UNK -0.0456
57 H28 -0.0140 1.0180 -1.8420 H 1 UNK 0.1180
58 C24 -1.5130 -0.3570 -1.5140 C.ar 1 UNK -0.2237
59 C25 -2.7450 0.4780 -1.8360 C.3 1 UNK -0.0119
60 C26 -2.7180 1.7670 -0.9710 C.3 1 UNK -0.0477
61 H29 -1.6770 1.7840 -0.6110 H 1 UNK 0.1188
62 C27 -2.7200 1.0030 -3.2930 C.3 1 UNK -0.1682
63 H30 -3.7270 1.0370 -3.7090 H 1 UNK 0.1396
64 H31 -2.0900 0.3940 -3.9430 H 1 UNK 0.1396
65 C28 -2.1920 2.4370 -3.1710 C.3 1 UNK -0.1257
66 H32 -2.5150 3.0650 -4.0200 H 1 UNK 0.1424
67 H33 -1.0910 2.4160 -3.0990 H 1 UNK 0.1424
68 N3 -2.7380 2.9730 -1.8810 N.4 1 UNK -0.0074
69 H60 -2.1190 3.7060 -1.4990 H 1 UNK 0.2483
70 C29 -4.0980 3.5770 -2.0900 C.3 1 UNK -0.0833
71 H34 -4.6850 2.9020 -2.7310 H 1 UNK 0.1558
72 H35 -3.9720 4.5480 -2.6010 H 1 UNK 0.1558
73 C30 -4.8220 3.7870 -0.7810 C.2 1 UNK -0.2029
74 H36 -5.5700 4.5650 -0.7150 H 1 UNK 0.1811
75 C31 -4.6060 3.0220 0.2780 C.2 1 UNK -0.1087
76 H37 -5.1970 3.2300 1.1600 H 1 UNK 0.1763
77 C32 -3.5750 1.8880 0.3270 C.3 1 UNK -0.0056
78 C33 -2.4900 2.2320 1.3980 C.3 1 UNK -0.1578
79 H38 -1.7330 1.4460 1.4080 H 1 UNK 0.0776
80 H39 -1.9900 3.1540 1.0970 H 1 UNK 0.0776
81 C34 -2.9400 2.4330 2.8570 C.3 1 UNK -0.2080
82 H40 -3.2710 1.4930 3.2940 H 1 UNK 0.0921
83 H41 -2.0960 2.7870 3.4470 H 1 UNK 0.0921
84 H42 -3.7370 3.1700 2.9290 H 1 UNK 0.0921
85 C35 -4.2340 0.5180 0.6880 C.3 1 UNK 0.0433
86 H43 -3.4510 -0.1510 1.0470 H 1 UNK 0.1464
87 O4 -5.1960 0.7410 1.7610 O.3 1 UNK -0.2840
88 C36 -5.3920 -0.1770 2.7440 C.2 1 UNK 0.3041
89 C37 -6.6020 0.1770 3.5780 C.3 1 UNK -0.2077
90 H44 -7.4960 0.1180 2.9590 H 1 UNK 0.1238
91 H45 -6.6920 -0.5160 4.4130 H 1 UNK 0.1238
92 H46 -6.5000 1.1930 3.9580 H 1 UNK 0.1238
93 O5 -4.6510 -1.1780 2.9420 O.2 1 UNK -0.3336
94 C38 -4.9500 -0.1910 -0.4980 C.3 1 UNK 0.0975
95 C39 -6.1620 0.6070 -1.0010 C.2 1 UNK 0.2700
96 O6 -7.2410 0.7340 -0.3600 O.2 1 UNK -0.3138
97 O7 -5.9740 1.1660 -2.2270 O.3 1 UNK -0.2504
98 C40 -7.0780 1.8610 -2.8640 C.3 1 UNK -0.0578
99 H47 -6.7470 2.2710 -3.8190 H 1 UNK 0.1006
100 H48 -7.8980 1.1630 -3.0380 H 1 UNK 0.1006
101 H49 -7.4240 2.6730 -2.2220 H 1 UNK 0.1006
102 O8 -5.4760 -1.4390 -0.0120 O.3 1 UNK -0.3328
103 H50 -6.2620 -1.6850 -0.5060 H 1 UNK 0.2491
104 C41 -3.9190 -0.5430 -1.6150 C.3 1 UNK 0.0440
105 H51 -4.4490 -0.7210 -2.5520 H 1 UNK 0.1361
106 N4 -3.1780 -1.7710 -1.2810 N.pl3 1 UNK -0.2628
107 C42 -3.7340 -3.0280 -1.7910 C.3 1 UNK -0.0844
108 H52 -3.7290 -3.7740 -0.9950 H 1 UNK 0.0973
109 H53 -4.7600 -2.8940 -2.1350 H 1 UNK 0.0973
110 H54 -3.1290 -3.3920 -2.6220 H 1 UNK 0.0973
111 C43 -1.8350 -1.5730 -1.1770 C.ar 1 UNK 0.1647
112 C44 -0.9060 -2.4410 -0.8090 C.ar 1 UNK -0.2548
113 H55 -1.2230 -3.4440 -0.5690 H 1 UNK 0.1640
114 C45 0.3890 -2.0930 -0.7420 C.ar 1 UNK 0.2003
115 O9 1.3290 -3.0170 -0.3910 O.3 1 UNK -0.2231
116 C46 1.0610 -4.3010 0.2280 C.3 1 UNK -0.0457
117 H56 0.4990 -4.9360 -0.4570 H 1 UNK 0.0968
118 H57 2.0090 -4.7850 0.4620 H 1 UNK 0.0968
119 H58 0.4970 -4.1550 1.1500 H 1 UNK 0.0968
@BOND
1 1 5 1
2 1 2 1
3 1 3 1
4 1 4 1
5 5 8 1
6 5 6 1
7 5 7 1
8 8 9 1
9 8 11 1
10 8 14 1
11 9 10 1
12 11 25 1
13 11 12 1
14 11 13 1
15 14 17 1
16 14 15 1
17 14 16 1
18 17 19 1
19 17 22 1
20 17 18 1
21 19 47 1
22 19 20 1
23 19 21 1
24 22 25 1
25 22 23 1
26 22 24 1
27 25 27 1
28 27 30 1
29 27 28 1
30 27 29 1
31 30 33 1
32 30 31 1
33 30 32 1
34 33 34 ar
35 33 46 ar
36 34 35 ar
37 34 43 ar
38 35 37 ar
39 35 36 1
40 37 39 ar
41 37 38 1
42 39 41 ar
43 39 40 1
44 41 43 ar
45 41 42 1
46 43 44 ar
47 44 46 ar
48 44 45 1
49 46 47 1
50 47 48 1
51 47 55 1
52 48 49 2
53 48 50 1
54 50 51 1
55 51 52 1
56 51 53 1
57 51 54 1
58 55 56 ar
59 55 114 ar
60 56 58 ar
61 56 57 1
62 58 59 1
63 58 111 ar
64 59 60 1
65 59 62 1
66 59 104 1
67 60 68 1
68 60 77 1
69 60 61 1
70 62 65 1
71 62 63 1
72 62 64 1
73 65 68 1
74 65 66 1
75 65 67 1
76 68 70 1
77 70 73 1
78 70 71 1
79 70 72 1
80 73 75 2
81 73 74 1
82 75 77 1
83 75 76 1
84 77 78 1
85 77 85 1
86 78 81 1
87 78 79 1
88 78 80 1
89 81 82 1
90 81 83 1
91 81 84 1
92 85 87 1
93 85 94 1
94 85 86 1
95 87 88 1
96 88 89 1
97 88 93 2
98 89 90 1
99 89 91 1
100 89 92 1
101 94 95 1
102 94 102 1
103 94 104 1
104 95 96 2
105 95 97 1
106 97 98 1
107 98 99 1
108 98 100 1
109 98 101 1
110 102 103 1
111 104 106 1
112 104 105 1
113 106 107 1
114 106 111 1
115 107 108 1
116 107 109 1
117 107 110 1
118 111 112 ar
119 112 114 ar
120 112 113 1
121 114 115 1
122 115 116 1
123 116 117 1
124 116 118 1
125 116 119 1
126 25 26 1
127 68 69 1