@COMMENT
IDNUMBER = VLB
SOURCE = PDB_LIGAND
SUPPLIER = PDB_LIGAND
LIGANDBOX_ID = PDB_LIGAND-00003420-03
MOLECULAR_FORMULA = C46H58N4O9
MOLECULAR_WEIGHT = 810.989
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 3
NUM_OF_ACCEPTOR = 9
NUM_OF_CHIRAL_ATOMS = 9
TPSA = 154.1000
HOMO = -12.5790
LUMO = -4.7975
LOGP = 9.374
LOGS = -10.752
@MOLECULE
PDB_LIGAND-00003420-03
119 127 0 0 0
SMALL
USER_CHARGES
@ATOM
1 C1 -3.7516 -3.7865 -3.0685 C.3 1 LGD -0.0946
2 C2 -2.4139 -4.1335 -3.7722 C.3 1 LGD -0.0756
3 C3 -1.8696 -3.0438 -4.7622 C.3 1 LGD 0.1581
4 O1 -2.8820 -2.8010 -5.7366 O.3 1 LGD -0.5633
5 C4 -0.6190 -3.6135 -5.5465 C.3 1 LGD 0.0690
6 C5 -1.5492 -1.6750 -4.0498 C.3 1 LGD -0.1147
7 C6 -0.1903 -1.7854 -3.3448 C.3 1 LGD -0.0940
8 C7 0.2444 -0.6350 -2.4051 C.3 1 LGD -0.0666
9 C8 0.8433 -2.0351 -4.4501 C.3 1 LGD 0.1046
10 N1 0.7236 -3.4256 -4.9142 N.4 1 LGD -0.6736
11 C9 1.0745 -4.4436 -3.8787 C.3 1 LGD 0.1023
12 C10 2.2106 -4.0092 -2.8870 C.3 1 LGD -0.0173
13 C11 1.6619 -3.6390 -1.5110 C.ar 1 LGD -0.1590
14 C12 1.1800 -4.5894 -0.5361 C.ar 1 LGD -0.1044
15 C13 1.1787 -5.9909 -0.5636 C.ar 1 LGD -0.1012
16 C14 0.6110 -6.6738 0.5328 C.ar 1 LGD -0.1275
17 C15 0.0559 -5.9533 1.6168 C.ar 1 LGD -0.0940
18 C16 0.0635 -4.5437 1.6103 C.ar 1 LGD -0.1329
19 C17 0.6413 -3.9091 0.5059 C.ar 1 LGD -0.0475
20 N2 0.7259 -2.5626 0.2896 N.ar 1 LGD -0.1623
21 C18 1.3843 -2.3596 -0.9444 C.ar 1 LGD -0.0256
22 C19 1.5556 -0.9421 -1.5437 C.3 1 LGD 0.0544
23 C20 2.8416 -0.7287 -2.3895 C.2 1 LGD 0.6222
24 O2 2.9049 0.0256 -3.3482 O.2 1 LGD -0.5591
25 O3 3.9027 -1.4582 -1.9297 O.3 1 LGD -0.3983
26 C21 5.1738 -1.3520 -2.5937 C.3 1 LGD 0.1174
27 C22 1.7034 0.1065 -0.3819 C.ar 1 LGD -0.1866
28 C23 0.9814 1.3305 -0.4137 C.ar 1 LGD -0.0285
29 C24 1.0872 2.2300 0.6500 C.ar 1 LGD -0.2087
30 C25 0.3591 3.5404 0.8320 C.3 1 LGD 0.0106
31 C26 -1.1567 3.4039 0.5812 C.3 1 LGD 0.1517
32 C27 0.7741 4.6037 -0.2151 C.3 1 LGD -0.0958
33 C28 -0.5374 5.2978 -0.6320 C.3 1 LGD 0.1215
34 N3 -1.5392 4.8066 0.3341 N.4 1 LGD -0.7013
35 C29 -2.9246 4.9236 -0.1514 C.3 1 LGD 0.1604
36 C30 -3.8224 4.3115 0.8992 C.2 1 LGD -0.2162
37 C31 -3.4255 3.3307 1.7185 C.2 1 LGD -0.1219
38 C32 -2.0250 2.6962 1.6927 C.3 1 LGD -0.0288
39 C33 -2.1998 1.1840 1.3196 C.3 1 LGD -0.0837
40 C34 -2.8701 0.9109 -0.0528 C.3 1 LGD -0.1020
41 C35 -1.3322 2.7717 3.1124 C.3 1 LGD 0.1301
42 O4 -2.3359 2.7867 4.1594 O.3 1 LGD -0.4817
43 C36 -2.6688 1.6420 4.8300 C.2 1 LGD 0.6447
44 C37 -3.7578 1.9085 5.8625 C.3 1 LGD -0.1522
45 O5 -2.1615 0.5482 4.6477 O.2 1 LGD -0.5143
46 C38 -0.4056 4.0044 3.3298 C.3 1 LGD 0.1241
47 C39 0.1230 4.0400 4.7963 C.2 1 LGD 0.5940
48 O6 0.1763 5.0561 5.4722 O.2 1 LGD -0.5047
49 O7 0.4819 2.8010 5.2600 O.3 1 LGD -0.4181
50 C40 0.9729 2.6639 6.6045 C.3 1 LGD 0.1204
51 O8 -1.1743 5.2009 3.1354 O.3 1 LGD -0.6246
52 C41 0.7807 3.9687 2.3019 C.3 1 LGD 0.1991
53 N4 1.8178 2.9674 2.6853 N.pl3 1 LGD -0.6024
54 C42 3.0271 3.4723 3.3598 C.3 1 LGD 0.1570
55 C43 1.8972 1.9801 1.7257 C.ar 1 LGD 0.1904
56 C44 2.6727 0.8224 1.7836 C.ar 1 LGD -0.2336
57 C45 2.5868 -0.1173 0.7272 C.ar 1 LGD 0.1930
58 O9 3.3512 -1.2698 0.7704 O.3 1 LGD -0.3092
59 C46 4.2093 -1.6290 1.8661 C.3 1 LGD 0.1068
60 H1 -3.6365 -2.9450 -2.3752 H 1 LGD 0.0534
61 H2 -4.1006 -4.6463 -2.4829 H 1 LGD 0.0534
62 H3 -4.5364 -3.5377 -3.7936 H 1 LGD 0.0534
63 H4 -2.5522 -5.0713 -4.3259 H 1 LGD 0.0575
64 H5 -1.6788 -4.3568 -2.9931 H 1 LGD 0.0575
65 H6 -2.9237 -1.8401 -5.8844 H 1 LGD 0.4136
66 H7 -0.5826 -3.0936 -6.5054 H 1 LGD 0.1058
67 H8 -0.7702 -4.6732 -5.7589 H 1 LGD 0.1058
68 H9 -2.3307 -1.4007 -3.3320 H 1 LGD 0.0736
69 H10 -1.5035 -0.8650 -4.7900 H 1 LGD 0.0736
70 H11 -0.3085 -2.6561 -2.7022 H 1 LGD 0.1043
71 H12 -0.5911 -0.4613 -1.7149 H 1 LGD 0.0739
72 H13 0.3633 0.2817 -2.9965 H 1 LGD 0.0739
73 H14 1.8539 -1.8682 -4.0953 H 1 LGD 0.1059
74 H15 0.6662 -1.3537 -5.2842 H 1 LGD 0.1059
75 H16 1.3827 -5.3523 -4.3987 H 1 LGD 0.1039
76 H17 0.1896 -4.6879 -3.2938 H 1 LGD 0.1039
77 H18 2.8766 -3.2606 -3.3208 H 1 LGD 0.0833
78 H19 2.8606 -4.8821 -2.7508 H 1 LGD 0.0833
79 H20 1.6009 -6.5384 -1.4009 H 1 LGD 0.1314
80 H21 0.5976 -7.7599 0.5433 H 1 LGD 0.1516
81 H22 -0.3820 -6.4881 2.4548 H 1 LGD 0.1531
82 H23 -0.3664 -3.9743 2.4294 H 1 LGD 0.1454
83 H24 0.3825 -1.8384 0.9037 H 1 LGD 0.2974
84 H25 5.5426 -0.3195 -2.5461 H 1 LGD 0.0634
85 H26 5.0804 -1.6501 -3.6457 H 1 LGD 0.0634
86 H27 5.9047 -2.0088 -2.1063 H 1 LGD 0.0634
87 H28 0.3303 1.6009 -1.2361 H 1 LGD 0.1336
88 H29 -1.2983 2.8799 -0.3628 H 1 LGD 0.1005
89 H30 1.2365 4.1379 -1.0946 H 1 LGD 0.0956
90 H31 1.4902 5.3309 0.1866 H 1 LGD 0.0956
91 H32 -0.8196 4.9793 -1.6374 H 1 LGD 0.1031
92 H33 -0.4569 6.3856 -0.5920 H 1 LGD 0.1031
93 H34 -3.0215 4.3908 -1.0991 H 1 LGD 0.1038
94 H35 -3.1665 5.9767 -0.3065 H 1 LGD 0.1038
95 H36 -4.8338 4.7099 0.9530 H 1 LGD 0.1802
96 H37 -4.1309 2.9139 2.4354 H 1 LGD 0.1809
97 H38 -2.8081 0.6922 2.0881 H 1 LGD 0.0810
98 H39 -1.2245 0.6813 1.3373 H 1 LGD 0.0810
99 H40 -2.2569 1.2679 -0.8879 H 1 LGD 0.0421
100 H41 -3.8560 1.3872 -0.1188 H 1 LGD 0.0421
101 H42 -3.0129 -0.1682 -0.1910 H 1 LGD 0.0421
102 H43 -0.6885 1.8893 3.2252 H 1 LGD 0.1356
103 H44 -3.9303 1.0146 6.4749 H 1 LGD 0.0926
104 H45 -4.6914 2.1832 5.3566 H 1 LGD 0.0926
105 H46 -3.4581 2.7365 6.5170 H 1 LGD 0.0926
106 H47 1.8836 3.2610 6.7399 H 1 LGD 0.0682
107 H48 1.2087 1.6125 6.8097 H 1 LGD 0.0682
108 H49 0.2146 3.0001 7.3230 H 1 LGD 0.0682
109 H50 -1.9552 5.1256 3.7143 H 1 LGD 0.4625
110 H51 1.2349 4.9675 2.2832 H 1 LGD 0.0947
111 H52 3.4091 2.7205 4.0615 H 1 LGD 0.0618
112 H53 2.8027 4.3873 3.9225 H 1 LGD 0.0618
113 H54 3.8051 3.7019 2.6209 H 1 LGD 0.0618
114 H55 3.3124 0.6587 2.6442 H 1 LGD 0.1705
115 H56 4.9902 -0.8708 2.0046 H 1 LGD 0.0632
116 H57 4.6914 -2.5921 1.6583 H 1 LGD 0.0632
117 H58 3.6265 -1.7233 2.7910 H 1 LGD 0.0632
118 H59 1.4090 -3.5367 -5.6498 H 1 LGD 0.4454
119 H60 -1.4445 5.3132 1.2063 H 1 LGD 0.4844
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 3 5 1
5 3 6 1
6 5 10 1
7 6 7 1
8 7 8 1
9 7 9 1
10 8 22 1
11 9 10 1
12 10 11 1
13 11 12 1
14 12 13 1
15 13 14 1
16 13 21 2
17 14 15 ar
18 14 19 ar
19 15 16 ar
20 16 17 ar
21 17 18 ar
22 18 19 ar
23 19 20 1
24 20 21 1
25 21 22 1
26 22 23 1
27 22 27 1
28 23 24 2
29 23 25 1
30 25 26 1
31 27 28 ar
32 27 57 ar
33 28 29 ar
34 29 30 1
35 29 55 ar
36 30 31 1
37 30 32 1
38 30 52 1
39 31 34 1
40 31 38 1
41 32 33 1
42 33 34 1
43 34 35 1
44 35 36 1
45 36 37 2
46 37 38 1
47 38 39 1
48 38 41 1
49 39 40 1
50 41 42 1
51 41 46 1
52 42 43 1
53 43 44 1
54 43 45 2
55 46 47 1
56 46 51 1
57 46 52 1
58 47 48 2
59 47 49 1
60 49 50 1
61 52 53 1
62 53 54 1
63 53 55 1
64 55 56 ar
65 56 57 ar
66 57 58 1
67 58 59 1
68 1 60 1
69 1 61 1
70 1 62 1
71 2 63 1
72 2 64 1
73 4 65 1
74 5 66 1
75 5 67 1
76 6 68 1
77 6 69 1
78 7 70 1
79 8 71 1
80 8 72 1
81 9 73 1
82 9 74 1
83 11 75 1
84 11 76 1
85 12 77 1
86 12 78 1
87 15 79 1
88 16 80 1
89 17 81 1
90 18 82 1
91 20 83 1
92 26 84 1
93 26 85 1
94 26 86 1
95 28 87 1
96 31 88 1
97 32 89 1
98 32 90 1
99 33 91 1
100 33 92 1
101 35 93 1
102 35 94 1
103 36 95 1
104 37 96 1
105 39 97 1
106 39 98 1
107 40 99 1
108 40 100 1
109 40 101 1
110 41 102 1
111 44 103 1
112 44 104 1
113 44 105 1
114 50 106 1
115 50 107 1
116 50 108 1
117 51 109 1
118 52 110 1
119 54 111 1
120 54 112 1
121 54 113 1
122 56 114 1
123 59 115 1
124 59 116 1
125 59 117 1
126 10 118 1
127 34 119 1