@COMMENT
LIGANDBOX_ID = D00168-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00168
NAME = Cytarabine_(JP18/USP/INN)_ARA-C_Depocyt_(TN)
MOLECULAR_FORMULA = C9H13N3O5
MOLECULAR_WEIGHT = 243.219
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 6
NUM_OF_CHIRAL_ATOMS = 4
TPSA = 128.6100
HOMO = -9.5392
LUMO = -0.2493
mLOGD = 0.364
mLOGS = -1.069
mLOGPA = -6.277
@MOLECULE
D00168-01
30 31 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 24.6930 -19.2940 0.3010 C.3 1 LGD 0.2667
2 N1 25.5340 -18.9180 1.4670 N.am 1 LGD -0.4048
3 O1 23.3260 -18.8890 0.5130 O.3 1 LGD -0.4160
4 C2 24.6130 -20.8250 0.0150 C.3 1 LGD 0.0652
5 C3 26.8300 -18.4560 1.2560 C.2 1 LGD 0.8653
6 C4 25.0170 -19.0160 2.7570 C.2 1 LGD 0.0660
7 C5 22.5120 -19.6960 -0.3530 C.3 1 LGD 0.1515
8 C6 23.1050 -21.0990 -0.1390 C.3 1 LGD 0.0974
9 O2 25.1710 -21.6390 1.0510 O.3 1 LGD -0.5909
10 N2 27.5610 -18.0950 2.3870 N.2 1 LGD -0.7719
11 O3 27.3190 -18.3720 0.1420 O.2 1 LGD -0.6037
12 C7 25.7730 -18.6490 3.8510 C.2 1 LGD -0.4096
13 C8 21.0170 -19.5550 0.0330 C.3 1 LGD 0.1490
14 O4 22.8160 -21.9830 -1.2230 O.3 1 LGD -0.5940
15 C9 27.1140 -18.1620 3.6330 C.2 1 LGD 0.7649
16 O5 20.7820 -19.9270 1.3940 O.3 1 LGD -0.6029
17 N3 27.9130 -17.7790 4.6800 N.pl3 1 LGD -0.9168
18 H1 25.0780 -18.7750 -0.5860 H 1 LGD 0.1059
19 H2 25.1260 -21.0260 -0.9340 H 1 LGD 0.0852
20 H3 24.0050 -19.3990 2.8090 H 1 LGD 0.1825
21 H4 22.6560 -19.3870 -1.3970 H 1 LGD 0.0700
22 H5 22.7190 -21.5130 0.8010 H 1 LGD 0.0798
23 H6 25.6300 -21.0370 1.6650 H 1 LGD 0.4163
24 H7 25.3710 -18.7250 4.8550 H 1 LGD 0.1528
25 H8 20.7090 -18.5140 -0.1280 H 1 LGD 0.0396
26 H9 20.4180 -20.1870 -0.6350 H 1 LGD 0.0396
27 H10 23.2110 -22.8460 -1.0050 H 1 LGD 0.4223
28 H11 19.8490 -19.7380 1.5960 H 1 LGD 0.4100
29 H12 27.4810 -17.6340 5.5810 H 1 LGD 0.4403
30 H13 28.7560 -17.2670 4.4620 H 1 LGD 0.4403
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 am
5 2 6 1
6 3 7 1
7 4 8 1
8 4 9 1
9 5 10 1
10 5 11 2
11 6 12 2
12 7 13 1
13 8 14 1
14 10 15 2
15 13 16 1
16 15 17 1
17 7 8 1
18 12 15 1
19 1 18 1
20 4 19 1
21 6 20 1
22 7 21 1
23 8 22 1
24 9 23 1
25 12 24 1
26 13 25 1
27 13 26 1
28 14 27 1
29 16 28 1
30 17 29 1
31 17 30 1