@COMMENT
LIGANDBOX_ID = D00212-05
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00212
NAME = Vancomycin_(USP)_Vancocin_(TN)
MOLECULAR_FORMULA = C66H75N9O24Cl2
MOLECULAR_WEIGHT = 1449.271
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 21
NUM_OF_ACCEPTOR = 24
NUM_OF_CHIRAL_ATOMS = 18
TPSA = 530.4900
HOMO = -6.4401
LUMO = -4.6823
mLOGD = -1.807
mLOGPA = -9.078
mLOGS = -0.465
@MOLECULE
D00212-05
177 186 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.5590 1.4688 5.9575 C.3 1 LGD 0.3562
2 C2 0.5363 2.2631 5.1812 C.3 1 LGD -0.1214
3 O1 -1.6962 2.3285 6.2142 O.3 1 LGD -0.4331
4 C3 0.0160 3.1732 4.0279 C.3 1 LGD 0.1002
5 C4 -2.3035 2.9402 5.0571 C.3 1 LGD 0.1230
6 C5 -1.2717 3.9346 4.4594 C.3 1 LGD 0.0987
7 C6 -0.2164 2.3660 2.7294 C.3 1 LGD -0.1241
8 N1 1.0739 4.1521 3.7167 N.4 1 LGD -0.8164
9 C7 -3.6137 3.6274 5.5033 C.3 1 LGD -0.0858
10 O2 -0.9454 4.9377 5.4283 O.3 1 LGD -0.6119
11 C8 -1.6104 -1.4948 2.8695 C.ar 1 LGD 0.1691
12 C9 -2.5949 -1.0592 1.9589 C.ar 1 LGD 0.1599
13 C10 -0.2411 -1.2801 2.5657 C.ar 1 LGD 0.0873
14 O3 -2.0474 -2.1608 4.0009 O.3 1 LGD -0.3495
15 C11 -2.2362 -0.3423 0.8024 C.ar 1 LGD -0.1709
16 O4 -3.9206 -1.3880 2.1758 O.3 1 LGD -0.2362
17 C12 0.0929 -0.5544 1.4021 C.ar 1 LGD -0.2372
18 O5 0.7687 -1.8068 3.3617 O.3 1 LGD -0.2619
19 C13 -1.4081 -2.1765 5.2969 C.3 1 LGD 0.3916
20 C14 -0.8837 -0.1126 0.4897 C.ar 1 LGD -0.0941
21 C15 -4.7732 -1.6876 1.1313 C.ar 1 LGD 0.0844
22 C16 2.1045 -1.7991 3.0067 C.ar 1 LGD 0.1596
23 C17 -1.4813 -0.7999 6.0466 C.3 1 LGD 0.1045
24 O6 -2.0414 -3.1949 6.1187 O.3 1 LGD -0.3999
25 C18 -0.4417 0.5725 -0.8258 C.3 1 LGD 0.1062
26 C19 -4.5328 -2.7871 0.2793 C.ar 1 LGD -0.0046
27 C20 -5.8619 -0.8414 0.8768 C.ar 1 LGD -0.1226
28 C21 3.0496 -1.1747 3.8387 C.ar 1 LGD 0.0000
29 C22 2.5170 -2.3395 1.7739 C.ar 1 LGD -0.1509
30 C23 -2.9084 -0.4659 6.5812 C.3 1 LGD 0.0983
31 C24 -3.4108 -3.0061 6.5767 C.3 1 LGD 0.1153
32 C25 -1.4231 0.4048 -1.9988 C.2 1 LGD 0.6594
33 N2 0.8349 -0.0234 -1.2413 N.am 1 LGD -0.5900
34 C26 -5.3493 -2.9970 -0.8463 C.ar 1 LGD -0.1153
35 Cl1 -3.1932 -3.8854 0.5675 Cl 1 LGD -0.1068
36 C27 -6.6688 -1.0472 -0.2543 C.ar 1 LGD -0.0728
37 C28 4.3509 -0.9364 3.3657 C.ar 1 LGD -0.0984
38 Cl2 2.6151 -0.6700 5.4602 Cl 1 LGD -0.0949
39 C29 3.8246 -2.1223 1.3133 C.ar 1 LGD -0.0877
40 C30 -3.4985 -1.6686 7.3687 C.3 1 LGD 0.0928
41 O7 -3.7831 -0.0775 5.5210 O.3 1 LGD -0.5806
42 N3 -2.0802 -0.8098 -2.1269 N.am 1 LGD -0.5750
43 O8 -1.6059 1.2934 -2.8136 O.2 1 LGD -0.5224
44 C31 1.8379 0.6757 -1.8898 C.2 1 LGD 0.6430
45 C32 -6.4042 -2.1130 -1.1445 C.ar 1 LGD -0.0574
46 C33 4.7319 -1.3623 2.0782 C.ar 1 LGD -0.1735
47 O9 -2.7832 -1.8150 8.5969 O.3 1 LGD -0.5942
48 C34 -3.2617 -1.0346 -2.9717 C.3 1 LGD 0.1394
49 C35 3.1976 -0.0164 -2.0664 C.3 1 LGD 0.0621
50 O10 1.6348 1.8095 -2.2877 O.2 1 LGD -0.5516
51 C36 -7.1204 -2.2223 -2.5057 C.3 1 LGD 0.1952
52 C37 6.0996 -0.9592 1.5217 C.3 1 LGD 0.1992
53 C38 -2.8728 -1.1433 -4.4491 C.ar 1 LGD -0.1813
54 C39 -4.4570 -0.0708 -2.6936 C.2 1 LGD 0.6557
55 N4 3.9499 0.1119 -0.8072 N.am 1 LGD -0.5882
56 C40 -6.2002 -1.6433 -3.6317 C.3 1 LGD -0.0081
57 O11 -8.3829 -1.5537 -2.4791 O.3 1 LGD -0.6207
58 C41 6.0157 0.3099 0.6185 C.3 1 LGD 0.0648
59 O12 6.7068 -2.0426 0.8197 O.3 1 LGD -0.5894
60 C42 -3.3968 -0.2631 -5.4141 C.ar 1 LGD -0.0615
61 C43 -2.0851 -2.2277 -4.8747 C.ar 1 LGD -0.0722
62 N5 -5.7256 -0.3134 -3.2059 N.am 1 LGD -0.5788
63 C44 5.3349 0.0660 -0.7441 C.2 1 LGD 0.6591
64 C45 -6.8179 -1.5336 -5.0441 C.2 1 LGD 0.6552
65 N6 7.3617 0.8654 0.4005 N.am 1 LGD -0.5719
66 C46 -3.2836 -0.5428 -6.7931 C.ar 1 LGD -0.1325
67 C47 -1.8669 -2.4551 -6.2420 C.ar 1 LGD -0.1828
68 O13 5.9766 -0.1106 -1.7677 O.2 1 LGD -0.5828
69 N7 -5.9238 -1.4589 -6.1028 N.am 1 LGD -0.5407
70 O14 -8.0200 -1.5012 -5.2490 O.2 1 LGD -0.5995
71 C48 7.8618 1.9433 1.1157 C.2 1 LGD 0.6471
72 C49 -4.0523 0.2923 -7.7664 C.ar 1 LGD -0.1869
73 C50 -2.4886 -1.6409 -7.2008 C.ar 1 LGD 0.1990
74 C51 -6.2766 -1.1136 -7.4913 C.3 1 LGD -0.0032
75 C52 9.2159 2.5391 0.6981 C.3 1 LGD 0.0373
76 O15 7.2272 2.4099 2.0454 O.2 1 LGD -0.5534
77 C53 -5.4408 0.0648 -8.0585 C.ar 1 LGD 0.0609
78 C54 -3.3906 1.3747 -8.4009 C.ar 1 LGD 0.1821
79 C55 -6.1713 -2.3628 -8.3857 C.2 1 LGD 0.9399
80 C56 10.3391 1.4696 0.6564 C.3 1 LGD -0.1027
81 N8 9.1219 3.1777 -0.6346 N.4 1 LGD -0.7415
82 C57 -6.0956 0.9171 -8.9698 C.ar 1 LGD -0.1928
83 C58 -4.0674 2.2065 -9.3021 C.ar 1 LGD -0.2839
84 O16 -2.0753 1.6276 -8.1389 O.3 1 LGD -0.5098
85 C59 -5.4181 1.9779 -9.5853 C.ar 1 LGD 0.1740
86 O17 -6.0739 2.7847 -10.4675 O.3 1 LGD -0.4931
87 O18 -4.3501 0.9434 -2.0277 O.2 1 LGD -0.6114
88 O19 -2.3475 -1.9481 -8.5219 O.3 1 LGD -0.5002
89 O20 -7.1025 -3.1477 -8.3476 O.co2 1 LGD -0.8029
90 O21 -5.1707 -2.4908 -9.0716 O.co2 1 LGD -0.8029
91 C60 8.2225 4.3499 -0.6066 C.3 1 LGD 0.0856
92 C61 10.5645 0.7451 2.0148 C.3 1 LGD -0.0559
93 C62 10.9440 1.7360 3.1448 C.3 1 LGD -0.0978
94 C63 11.6450 -0.3529 1.8687 C.3 1 LGD -0.0978
95 C64 3.0613 -1.5189 -2.4470 C.3 1 LGD -0.1794
96 C65 2.1414 -1.7427 -3.6493 C.2 1 LGD 0.6557
97 N9 2.5324 -1.3058 -4.8951 N.am 1 LGD -0.6798
98 O22 1.0667 -2.3048 -3.5476 O.2 1 LGD -0.5747
99 C66 -4.4370 -3.1636 5.4164 C.3 1 LGD 0.1157
100 O23 -5.7685 -3.1441 5.9269 O.3 1 LGD -0.6153
101 O24 -0.9690 0.2868 5.2230 O.3 1 LGD -0.4321
102 H1 -0.1298 1.1524 6.9158 H 1 LGD 0.1001
103 H2 1.0685 2.8833 5.9140 H 1 LGD 0.0712
104 H3 1.2825 1.5711 4.7800 H 1 LGD 0.0712
105 H4 -2.5589 2.1743 4.3142 H 1 LGD 0.0954
106 H5 -1.7100 4.4172 3.5763 H 1 LGD 0.1027
107 H6 -0.5695 3.0148 1.9179 H 1 LGD 0.0819
108 H7 0.7176 1.8954 2.3982 H 1 LGD 0.0819
109 H8 -0.9622 1.5772 2.8762 H 1 LGD 0.0819
110 H9 0.7910 4.7202 2.9316 H 1 LGD 0.4541
111 H10 1.2112 4.7489 4.5207 H 1 LGD 0.4541
112 H11 -3.4353 4.3471 6.3121 H 1 LGD 0.0641
113 H12 -4.0731 4.1624 4.6626 H 1 LGD 0.0641
114 H13 -4.3338 2.8823 5.8630 H 1 LGD 0.0641
115 H14 -1.0875 4.5356 6.3046 H 1 LGD 0.4470
116 H15 -3.0182 0.0159 0.1410 H 1 LGD 0.1915
117 H16 1.1308 -0.3182 1.2000 H 1 LGD 0.1192
118 H17 -0.3608 -2.4654 5.1847 H 1 LGD 0.1000
119 H18 -0.8237 -0.9072 6.9187 H 1 LGD 0.0592
120 H19 -0.3181 1.6469 -0.6390 H 1 LGD 0.0933
121 H20 -6.0506 0.0078 1.5273 H 1 LGD 0.1504
122 H21 1.8042 -2.8650 1.1444 H 1 LGD 0.1770
123 H22 -2.8240 0.3695 7.2868 H 1 LGD 0.0552
124 H23 -3.6375 -3.8145 7.2838 H 1 LGD 0.1089
125 H24 1.0143 -0.9843 -0.9894 H 1 LGD 0.3257
126 H25 -5.1253 -3.8174 -1.5227 H 1 LGD 0.1598
127 H26 -7.4628 -0.3364 -0.4638 H 1 LGD 0.1715
128 H27 5.0552 -0.3931 3.9901 H 1 LGD 0.1526
129 H28 4.1128 -2.4971 0.3353 H 1 LGD 0.1650
130 H29 -4.5500 -1.4555 7.5994 H 1 LGD 0.1074
131 H30 -4.5371 0.3862 5.9249 H 1 LGD 0.4118
132 H31 -1.8084 -1.5508 -1.4976 H 1 LGD 0.3106
133 H32 -2.0686 -2.4573 8.4380 H 1 LGD 0.4121
134 H33 -3.6207 -2.0274 -2.6810 H 1 LGD 0.0600
135 H34 3.7261 0.5120 -2.8707 H 1 LGD 0.1068
136 H35 -7.2907 -3.2845 -2.7235 H 1 LGD 0.0657
137 H36 6.7362 -0.7033 2.3788 H 1 LGD 0.0536
138 H37 3.4376 0.2587 0.0504 H 1 LGD 0.3126
139 H38 -5.3564 -2.3317 -3.7423 H 1 LGD 0.0747
140 H39 -8.7022 -1.5228 -3.4013 H 1 LGD 0.4638
141 H40 5.3978 1.0526 1.1391 H 1 LGD 0.0871
142 H41 6.7617 -2.7909 1.4397 H 1 LGD 0.4352
143 H42 -3.9984 0.5906 -5.1168 H 1 LGD 0.1510
144 H43 -1.6659 -2.9154 -4.1454 H 1 LGD 0.1310
145 H44 -6.4155 0.4127 -3.0783 H 1 LGD 0.3407
146 H45 7.9239 0.4682 -0.3384 H 1 LGD 0.3419
147 H46 -1.2659 -3.3029 -6.5583 H 1 LGD 0.1493
148 H47 -4.9441 -1.5750 -5.8907 H 1 LGD 0.3123
149 H48 -7.3307 -0.8108 -7.5188 H 1 LGD 0.0880
150 H49 9.4759 3.3023 1.4340 H 1 LGD 0.1403
151 H50 10.1060 0.7263 -0.1173 H 1 LGD 0.0667
152 H51 11.2762 1.9518 0.3483 H 1 LGD 0.0667
153 H52 10.0441 3.4798 -0.9196 H 1 LGD 0.4599
154 H53 -7.1406 0.7469 -9.2139 H 1 LGD 0.1584
155 H54 -3.5404 3.0285 -9.7788 H 1 LGD 0.1335
156 H55 -1.7681 0.9642 -7.4966 H 1 LGD 0.4291
157 H56 -5.4444 3.4467 -10.8013 H 1 LGD 0.4186
158 H57 -3.1375 -1.6179 -8.9900 H 1 LGD 0.4920
159 H58 8.5884 5.0767 0.1214 H 1 LGD 0.1092
160 H59 8.1936 4.8135 -1.5948 H 1 LGD 0.1092
161 H60 7.2145 4.0364 -0.3276 H 1 LGD 0.1092
162 H61 9.6316 0.2446 2.3051 H 1 LGD 0.0569
163 H62 11.1469 1.1984 4.0798 H 1 LGD 0.0509
164 H63 11.8419 2.3090 2.8802 H 1 LGD 0.0509
165 H64 10.1299 2.4443 3.3425 H 1 LGD 0.0509
166 H65 12.6125 0.0816 1.5865 H 1 LGD 0.0509
167 H66 11.7767 -0.8976 2.8122 H 1 LGD 0.0509
168 H67 11.3588 -1.0805 1.0985 H 1 LGD 0.0509
169 H68 4.0500 -1.9315 -2.6843 H 1 LGD 0.0761
170 H69 2.6706 -2.0942 -1.5979 H 1 LGD 0.0761
171 H70 3.4224 -0.8463 -5.0159 H 1 LGD 0.3274
172 H71 1.9234 -1.4571 -5.6857 H 1 LGD 0.3274
173 H72 -4.3281 -2.3608 4.6818 H 1 LGD 0.0569
174 H73 -4.2520 -4.1139 4.9003 H 1 LGD 0.0569
175 H74 -6.3728 -3.1289 5.1638 H 1 LGD 0.4229
176 H75 1.9337 3.6700 3.4980 H 1 LGD 0.4541
177 H76 8.7819 2.5063 -1.3103 H 1 LGD 0.4599
@BOND
1 1 2 1
2 1 3 1
3 2 4 1
4 3 5 1
5 4 6 1
6 4 7 1
7 4 8 1
8 5 9 1
9 6 10 1
10 5 6 1
11 11 12 ar
12 11 13 ar
13 11 14 1
14 12 15 ar
15 12 16 1
16 13 17 ar
17 13 18 1
18 14 19 1
19 15 20 ar
20 16 21 1
21 18 22 1
22 19 23 1
23 19 24 1
24 20 25 1
25 21 26 ar
26 21 27 ar
27 22 28 ar
28 22 29 ar
29 23 30 1
30 24 31 1
31 25 32 1
32 25 33 1
33 26 34 ar
34 26 35 1
35 27 36 ar
36 28 37 ar
37 28 38 1
38 29 39 ar
39 30 40 1
40 30 41 1
41 32 42 am
42 32 43 2
43 33 44 am
44 34 45 ar
45 37 46 ar
46 40 47 1
47 42 48 1
48 44 49 1
49 44 50 2
50 45 51 1
51 46 52 1
52 48 53 1
53 48 54 1
54 49 55 1
55 51 56 1
56 51 57 1
57 52 58 1
58 52 59 1
59 53 60 ar
60 53 61 ar
61 54 62 am
62 55 63 am
63 56 64 1
64 58 65 1
65 60 66 ar
66 61 67 ar
67 63 68 2
68 64 69 am
69 64 70 2
70 65 71 am
71 66 72 1
72 66 73 ar
73 69 74 1
74 71 75 1
75 71 76 2
76 72 77 ar
77 72 78 ar
78 74 79 1
79 75 80 1
80 75 81 1
81 77 82 ar
82 78 83 ar
83 78 84 1
84 82 85 ar
85 85 86 1
86 17 20 ar
87 31 40 1
88 36 45 ar
89 39 46 ar
90 56 62 1
91 58 63 1
92 67 73 ar
93 74 77 1
94 83 85 ar
95 54 87 2
96 73 88 1
97 79 89 1
98 79 90 2
99 81 91 1
100 80 92 1
101 92 93 1
102 92 94 1
103 49 95 1
104 95 96 1
105 96 97 am
106 96 98 2
107 31 99 1
108 99 100 1
109 23 101 1
110 1 101 1
111 1 102 1
112 2 103 1
113 2 104 1
114 5 105 1
115 6 106 1
116 7 107 1
117 7 108 1
118 7 109 1
119 8 110 1
120 8 111 1
121 9 112 1
122 9 113 1
123 9 114 1
124 10 115 1
125 15 116 1
126 17 117 1
127 19 118 1
128 23 119 1
129 25 120 1
130 27 121 1
131 29 122 1
132 30 123 1
133 31 124 1
134 33 125 1
135 34 126 1
136 36 127 1
137 37 128 1
138 39 129 1
139 40 130 1
140 41 131 1
141 42 132 1
142 47 133 1
143 48 134 1
144 49 135 1
145 51 136 1
146 52 137 1
147 55 138 1
148 56 139 1
149 57 140 1
150 58 141 1
151 59 142 1
152 60 143 1
153 61 144 1
154 62 145 1
155 65 146 1
156 67 147 1
157 69 148 1
158 74 149 1
159 75 150 1
160 80 151 1
161 80 152 1
162 81 153 1
163 82 154 1
164 83 155 1
165 84 156 1
166 86 157 1
167 88 158 1
168 91 159 1
169 91 160 1
170 91 161 1
171 92 162 1
172 93 163 1
173 93 164 1
174 93 165 1
175 94 166 1
176 94 167 1
177 94 168 1
178 95 169 1
179 95 170 1
180 97 171 1
181 97 172 1
182 99 173 1
183 99 174 1
184 100 175 1
185 8 176 1
186 81 177 1