@COMMENT
LIGANDBOX_ID = D00276-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00276
NAME = Clarithromycin_(JP18/USP/INN)_Biaxin_(TN)
MOLECULAR_FORMULA = C38H69NO13
MOLECULAR_WEIGHT = 747.964
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 4
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 18
TPSA = 182.9100
HOMO = -11.6701
LUMO = -4.4134
mLOGPA = -4.661
mLOGD = 1.225
mLOGS = -1.367
@MOLECULE
D00276-02
122 124 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 0.6742 1.2484 -0.8649 C.3 1 LGD 0.1558
2 C2 -0.1936 2.5912 -0.9098 C.3 1 LGD 0.1676
3 C3 -0.1152 -0.1217 -1.1362 C.3 1 LGD -0.0903
4 O1 1.8237 1.2663 0.0619 O.3 1 LGD -0.4199
5 C4 -0.6384 2.8236 -2.4115 C.3 1 LGD -0.0586
6 C5 -0.1336 -1.2915 -0.0736 C.3 1 LGD 0.1773
7 C6 0.2071 -0.6663 -2.5625 C.3 1 LGD -0.0833
8 C7 1.8707 0.9102 1.4726 C.3 1 LGD 0.3387
9 C8 -1.5264 4.0708 -2.7393 C.3 1 LGD -0.1489
10 O2 0.8782 -2.2901 -0.4039 O.3 1 LGD -0.4263
11 C9 -1.4953 -2.0735 -0.0500 C.3 1 LGD -0.1274
12 C10 3.3101 1.1405 2.0166 C.3 1 LGD 0.1112
13 O3 1.0263 1.7339 2.2885 O.3 1 LGD -0.4279
14 C11 -2.9419 4.0308 -2.1095 C.2 1 LGD 0.5846
15 C12 -1.6158 4.2841 -4.2738 C.3 1 LGD -0.0908
16 C13 2.0516 -2.3562 0.4263 C.3 1 LGD 0.3557
17 C14 -2.6996 -1.1908 0.3367 C.2 1 LGD 0.6496
18 C15 -1.4479 -3.2973 0.9040 C.3 1 LGD -0.0814
19 C16 3.3548 0.6061 3.4708 C.3 1 LGD 0.0876
20 O4 4.3012 0.4788 1.2346 O.3 1 LGD -0.6323
21 C17 0.8867 1.2378 3.6426 C.3 1 LGD 0.1612
22 C18 -3.9537 2.9427 -2.5770 C.3 1 LGD -0.1801
23 O5 -3.2654 4.8722 -1.2867 O.2 1 LGD -0.5248
24 C19 2.5645 -3.8149 0.5816 C.3 1 LGD -0.1165
25 O6 3.0890 -1.5352 -0.1415 O.3 1 LGD -0.4897
26 O7 -3.5483 -1.0066 -0.7246 O.3 1 LGD -0.4410
27 O8 -2.8913 -0.7628 1.4631 O.2 1 LGD -0.5335
28 C20 2.2725 1.3173 4.3338 C.3 1 LGD -0.1273
29 C21 -0.1693 2.0893 4.3798 C.3 1 LGD -0.0919
30 C22 -4.1605 1.8719 -1.4477 C.3 1 LGD 0.1195
31 C23 -5.2682 3.6250 -3.0456 C.3 1 LGD -0.0873
32 C24 3.3362 -4.3840 -0.6534 C.3 1 LGD 0.1344
33 C25 3.6443 -1.9634 -1.4015 C.3 1 LGD 0.1327
34 C26 -4.8647 -0.4127 -0.5584 C.3 1 LGD 0.1353
35 C27 -5.0955 0.6378 -1.7165 C.3 1 LGD 0.1790
36 O9 -4.5677 2.5219 -0.2381 O.3 1 LGD -0.6233
37 C28 4.3546 -3.3208 -1.1684 C.3 1 LGD 0.1381
38 O10 2.4188 -4.6348 -1.7573 O.3 1 LGD -0.4451
39 C29 4.5978 -0.8482 -1.8872 C.3 1 LGD -0.0906
40 C30 -5.9103 -1.5683 -0.4963 C.3 1 LGD -0.0884
41 C31 -4.8253 0.0027 -3.1125 C.3 1 LGD -0.0818
42 O11 -6.4526 1.0843 -1.6849 O.3 1 LGD -0.5930
43 O12 4.9727 -3.7708 -2.3758 O.3 1 LGD -0.5856
44 C32 -5.7613 -2.4478 0.7660 C.3 1 LGD -0.0939
45 C33 0.5760 3.8408 -0.3859 C.3 1 LGD -0.1091
46 C34 1.3805 -5.6272 -1.6086 C.3 1 LGD 0.1353
47 C35 4.0801 -5.7034 -0.2916 C.3 1 LGD -0.1139
48 O13 -1.4500 2.4725 -0.2033 O.3 1 LGD -0.4582
49 C36 -1.5277 2.2586 1.2055 C.3 1 LGD 0.1363
50 N1 4.7295 0.6877 4.0289 N.4 1 LGD -0.6537
51 C37 4.8513 -0.1732 5.2229 C.3 1 LGD 0.0913
52 C38 5.1730 2.0592 4.3597 C.3 1 LGD 0.0913
53 H1 1.2169 1.3572 -1.8111 H 1 LGD 0.0761
54 H2 -1.1612 0.1858 -1.2188 H 1 LGD 0.0740
55 H3 0.2662 2.8906 -3.0304 H 1 LGD 0.0516
56 H4 -1.1768 1.9398 -2.7707 H 1 LGD 0.0516
57 H5 -0.0008 -0.8945 0.9355 H 1 LGD 0.0388
58 H6 -0.1369 0.0262 -3.3392 H 1 LGD 0.0451
59 H7 1.2845 -0.7947 -2.7023 H 1 LGD 0.0451
60 H8 -0.2820 -1.6298 -2.7509 H 1 LGD 0.0451
61 H9 1.6033 -0.1332 1.6089 H 1 LGD 0.0371
62 H10 -1.0275 4.9629 -2.3420 H 1 LGD 0.0736
63 H11 -1.6842 -2.4616 -1.0593 H 1 LGD 0.0924
64 H12 3.5140 2.2189 2.0225 H 1 LGD 0.0949
65 H13 -2.2787 5.1261 -4.5106 H 1 LGD 0.0449
66 H14 -0.6260 4.5101 -4.6902 H 1 LGD 0.0449
67 H15 -1.9963 3.3931 -4.7882 H 1 LGD 0.0449
68 H16 1.8005 -2.0000 1.4299 H 1 LGD 0.0425
69 H17 -1.1668 -2.9937 1.9204 H 1 LGD 0.0465
70 H18 -2.4291 -3.7859 0.9530 H 1 LGD 0.0465
71 H19 -0.7277 -4.0476 0.5577 H 1 LGD 0.0465
72 H20 3.0954 -0.4535 3.4245 H 1 LGD 0.0917
73 H21 3.8363 -0.0885 0.5895 H 1 LGD 0.4805
74 H22 0.5491 0.1930 3.6240 H 1 LGD 0.0519
75 H23 -3.5216 2.4315 -3.4438 H 1 LGD 0.0637
76 H24 3.2465 -3.8256 1.4417 H 1 LGD 0.0582
77 H25 1.7356 -4.4710 0.8697 H 1 LGD 0.0582
78 H26 2.2137 0.8516 5.3253 H 1 LGD 0.0705
79 H27 2.5309 2.3729 4.4841 H 1 LGD 0.0705
80 H28 0.0609 3.1592 4.2995 H 1 LGD 0.0638
81 H29 -1.1689 1.9158 3.9640 H 1 LGD 0.0638
82 H30 -0.2043 1.8245 5.4440 H 1 LGD 0.0638
83 H31 -3.1748 1.4293 -1.2948 H 1 LGD 0.0476
84 H32 -5.9385 2.9111 -3.5381 H 1 LGD 0.0500
85 H33 -5.8057 4.0781 -2.2029 H 1 LGD 0.0500
86 H34 -5.0484 4.4189 -3.7706 H 1 LGD 0.0500
87 H35 2.8498 -2.0980 -2.1429 H 1 LGD 0.0785
88 H36 -4.9180 0.1256 0.3961 H 1 LGD 0.0816
89 H37 -4.0575 3.3512 -0.1757 H 1 LGD 0.4401
90 H38 5.1267 -3.1714 -0.4023 H 1 LGD 0.0738
91 H39 4.9915 -1.0766 -2.8854 H 1 LGD 0.0523
92 H40 4.0668 0.1104 -1.9484 H 1 LGD 0.0523
93 H41 5.4469 -0.7296 -1.2024 H 1 LGD 0.0523
94 H42 -6.9248 -1.1512 -0.4962 H 1 LGD 0.0618
95 H43 -5.8291 -2.2034 -1.3867 H 1 LGD 0.0618
96 H44 -3.7672 -0.2639 -3.2291 H 1 LGD 0.0473
97 H45 -5.4208 -0.9063 -3.2589 H 1 LGD 0.0473
98 H46 -5.0857 0.6935 -3.9233 H 1 LGD 0.0473
99 H47 -6.4665 1.8580 -1.0926 H 1 LGD 0.4299
100 H48 4.2870 -4.2548 -2.8704 H 1 LGD 0.4292
101 H49 -4.8214 -3.0122 0.7469 H 1 LGD 0.0356
102 H50 -5.7785 -1.8332 1.6752 H 1 LGD 0.0356
103 H51 -6.5851 -3.1695 0.8287 H 1 LGD 0.0356
104 H52 1.0204 3.6687 0.5998 H 1 LGD 0.0508
105 H53 1.3883 4.1113 -1.0723 H 1 LGD 0.0508
106 H54 -0.0910 4.7062 -0.2892 H 1 LGD 0.0508
107 H55 0.8168 -5.7088 -2.5459 H 1 LGD 0.0376
108 H56 1.8077 -6.6118 -1.3833 H 1 LGD 0.0376
109 H57 0.6786 -5.3478 -0.8154 H 1 LGD 0.0376
110 H58 4.4409 -6.2176 -1.1915 H 1 LGD 0.0512
111 H59 4.9475 -5.4963 0.3484 H 1 LGD 0.0512
112 H60 3.4262 -6.3920 0.2580 H 1 LGD 0.0512
113 H61 -0.9822 3.0410 1.7454 H 1 LGD 0.0370
114 H62 -2.5749 2.2976 1.5269 H 1 LGD 0.0370
115 H63 -1.1431 1.2648 1.4568 H 1 LGD 0.0370
116 H64 4.5607 -1.1940 4.9675 H 1 LGD 0.0993
117 H65 5.8849 -0.1707 5.5735 H 1 LGD 0.0993
118 H66 4.2003 0.1996 6.0155 H 1 LGD 0.0993
119 H67 6.2132 2.0357 4.6895 H 1 LGD 0.0993
120 H68 5.0890 2.6953 3.4770 H 1 LGD 0.0993
121 H69 4.5528 2.4647 5.1608 H 1 LGD 0.0993
122 H70 5.3523 0.3248 3.3173 H 1 LGD 0.4691
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 1
5 3 6 1
6 3 7 1
7 4 8 1
8 5 9 1
9 6 10 1
10 6 11 1
11 8 12 1
12 8 13 1
13 9 14 1
14 9 15 1
15 10 16 1
16 11 17 1
17 11 18 1
18 12 19 1
19 12 20 1
20 13 21 1
21 14 22 1
22 14 23 2
23 16 24 1
24 16 25 1
25 17 26 1
26 17 27 2
27 19 28 1
28 21 29 1
29 22 30 1
30 22 31 1
31 24 32 1
32 25 33 1
33 26 34 1
34 30 35 1
35 30 36 1
36 32 37 1
37 32 38 1
38 33 39 1
39 34 40 1
40 35 41 1
41 35 42 1
42 37 43 1
43 40 44 1
44 21 28 1
45 33 37 1
46 34 35 1
47 2 45 1
48 38 46 1
49 32 47 1
50 2 48 1
51 48 49 1
52 19 50 1
53 50 51 1
54 50 52 1
55 1 53 1
56 3 54 1
57 5 55 1
58 5 56 1
59 6 57 1
60 7 58 1
61 7 59 1
62 7 60 1
63 8 61 1
64 9 62 1
65 11 63 1
66 12 64 1
67 15 65 1
68 15 66 1
69 15 67 1
70 16 68 1
71 18 69 1
72 18 70 1
73 18 71 1
74 19 72 1
75 20 73 1
76 21 74 1
77 22 75 1
78 24 76 1
79 24 77 1
80 28 78 1
81 28 79 1
82 29 80 1
83 29 81 1
84 29 82 1
85 30 83 1
86 31 84 1
87 31 85 1
88 31 86 1
89 33 87 1
90 34 88 1
91 36 89 1
92 37 90 1
93 39 91 1
94 39 92 1
95 39 93 1
96 40 94 1
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100 41 98 1
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102 43 100 1
103 44 101 1
104 44 102 1
105 44 103 1
106 45 104 1
107 45 105 1
108 45 106 1
109 46 107 1
110 46 108 1
111 46 109 1
112 47 110 1
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115 49 113 1
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118 51 116 1
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120 51 118 1
121 52 119 1
122 52 120 1
123 52 121 1
124 50 122 1