@COMMENT
LIGANDBOX_ID = D00276-17
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00276
NAME = Clarithromycin_(JP18/USP/INN)_Biaxin_(TN)
MOLECULAR_FORMULA = C38H69NO13
MOLECULAR_WEIGHT = 747.964
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 4
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 18
TPSA = 182.9100
HOMO = -11.6701
LUMO = -4.4134
mLOGPA = -4.661
mLOGD = 1.225
mLOGS = -1.367
@MOLECULE
D00276-17
122 124 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 0.1611 0.6372 1.1488 C.3 1 LGD 0.1685
2 C2 -0.9389 0.6152 2.3067 C.3 1 LGD 0.1502
3 C3 0.5823 -0.7595 0.5075 C.3 1 LGD -0.0671
4 O1 0.0054 1.7098 0.1641 O.3 1 LGD -0.4127
5 C4 -2.2447 -0.1673 1.8920 C.3 1 LGD -0.0534
6 C5 2.1265 -0.8997 0.3007 C.3 1 LGD 0.1779
7 C6 -0.1425 -1.2116 -0.7778 C.3 1 LGD -0.0895
8 C7 -1.2452 2.1048 -0.4570 C.3 1 LGD 0.3390
9 C8 -3.2718 -0.4739 3.0367 C.3 1 LGD -0.1543
10 O2 2.5989 0.3671 -0.2184 O.3 1 LGD -0.4509
11 C9 2.8431 -1.3516 1.6367 C.3 1 LGD -0.1628
12 C10 -0.9433 3.3514 -1.3261 C.3 1 LGD 0.0957
13 O3 -1.7384 1.0810 -1.3302 O.3 1 LGD -0.4313
14 C11 -2.7996 -1.5240 4.0861 C.2 1 LGD 0.5766
15 C12 -4.6442 -0.8721 2.4351 C.3 1 LGD -0.0885
16 C13 3.7772 0.3807 -1.0535 C.3 1 LGD 0.3500
17 C14 2.7933 -2.8962 1.7217 C.2 1 LGD 0.6516
18 C15 4.2951 -0.8411 1.8413 C.3 1 LGD -0.0864
19 C16 -2.2061 3.7845 -2.1186 C.3 1 LGD 0.1228
20 O4 -0.4862 4.4302 -0.5099 O.3 1 LGD -0.6261
21 C17 -3.0084 1.3714 -1.9386 C.3 1 LGD 0.1605
22 C18 -2.5422 -2.9939 3.6381 C.3 1 LGD -0.1806
23 O5 -2.6783 -1.1995 5.2561 O.2 1 LGD -0.5076
24 C19 3.4556 0.0899 -2.5541 C.3 1 LGD -0.1339
25 O6 4.4083 1.6658 -0.9135 O.3 1 LGD -0.3994
26 O7 1.6479 -3.3557 2.3296 O.3 1 LGD -0.4630
27 O8 3.6855 -3.6125 1.3012 O.2 1 LGD -0.4861
28 C20 -2.8106 2.5753 -2.8921 C.3 1 LGD -0.1256
29 C21 -3.4749 0.1011 -2.6786 C.3 1 LGD -0.0890
30 C22 -1.0291 -3.1909 3.2807 C.3 1 LGD 0.1346
31 C23 -3.0462 -3.9946 4.7164 C.3 1 LGD -0.0837
32 C24 2.9337 1.3052 -3.4049 C.3 1 LGD 0.1403
33 C25 3.6284 2.7783 -1.3941 C.3 1 LGD 0.1301
34 C26 0.7316 -4.2785 1.6653 C.3 1 LGD 0.1633
35 C27 -0.5706 -4.5170 2.5468 C.3 1 LGD 0.1881
36 O9 -0.2237 -2.9533 4.4419 O.3 1 LGD -0.5990
37 C28 3.5661 2.6559 -2.9356 C.3 1 LGD 0.1278
38 O10 1.4911 1.4410 -3.2412 O.3 1 LGD -0.4699
39 C29 4.3300 4.0723 -0.9238 C.3 1 LGD -0.0841
40 C30 1.4576 -5.6020 1.2401 C.3 1 LGD -0.1033
41 C31 -1.6815 -5.0559 1.5928 C.3 1 LGD -0.0906
42 O11 -0.3210 -5.5054 3.5488 O.3 1 LGD -0.5923
43 O12 2.8397 3.7520 -3.4963 O.3 1 LGD -0.5995
44 C32 1.7805 -5.6335 -0.2739 C.3 1 LGD -0.0920
45 C33 -1.3099 2.0410 2.8378 C.3 1 LGD -0.1185
46 C34 0.6181 0.5135 -3.9285 C.3 1 LGD 0.1304
47 C35 3.2594 1.1071 -4.9188 C.3 1 LGD -0.1212
48 O13 -0.3766 -0.1208 3.4322 O.3 1 LGD -0.4532
49 C36 0.6728 0.4530 4.2526 C.3 1 LGD 0.1240
50 N1 -1.8995 4.9563 -2.9833 N.4 1 LGD -0.6581
51 C37 -3.1355 5.5322 -3.5514 C.3 1 LGD 0.0891
52 C38 -0.9479 4.6736 -4.0812 C.3 1 LGD 0.0891
53 H1 1.0649 0.9369 1.6859 H 1 LGD 0.0885
54 H2 0.3223 -1.5125 1.2407 H 1 LGD 0.0760
55 H3 -2.7648 0.4193 1.1264 H 1 LGD 0.0456
56 H4 -1.9978 -1.1110 1.4011 H 1 LGD 0.0456
57 H5 2.3146 -1.6788 -0.4498 H 1 LGD 0.0456
58 H6 -1.2293 -1.2457 -0.6538 H 1 LGD 0.0410
59 H7 0.1100 -0.5494 -1.6059 H 1 LGD 0.0410
60 H8 0.1742 -2.2230 -1.0621 H 1 LGD 0.0410
61 H9 -2.0004 2.3494 0.2918 H 1 LGD 0.0523
62 H10 -3.4452 0.4575 3.5900 H 1 LGD 0.0700
63 H11 2.2662 -0.9722 2.4861 H 1 LGD 0.0790
64 H12 -0.1549 3.0768 -2.0366 H 1 LGD 0.0878
65 H13 -5.3513 -1.1455 3.2285 H 1 LGD 0.0407
66 H14 -5.0767 -0.0324 1.8762 H 1 LGD 0.0407
67 H15 -4.5547 -1.7195 1.7446 H 1 LGD 0.0407
68 H16 4.4751 -0.3852 -0.7049 H 1 LGD 0.0862
69 H17 4.9845 -1.2639 1.1009 H 1 LGD 0.0528
70 H18 4.3434 0.2537 1.7880 H 1 LGD 0.0528
71 H19 4.6606 -1.1364 2.8331 H 1 LGD 0.0528
72 H20 -2.9481 4.1090 -1.3867 H 1 LGD 0.1049
73 H21 0.3324 4.1321 -0.0739 H 1 LGD 0.4660
74 H22 -3.7444 1.6273 -1.1650 H 1 LGD 0.0514
75 H23 -3.1360 -3.1583 2.7338 H 1 LGD 0.0568
76 H24 4.3865 -0.2703 -3.0103 H 1 LGD 0.0627
77 H25 2.7622 -0.7562 -2.6175 H 1 LGD 0.0627
78 H26 -3.7768 2.8502 -3.3323 H 1 LGD 0.0708
79 H27 -2.1516 2.2765 -3.7162 H 1 LGD 0.0708
80 H28 -2.7529 -0.1932 -3.4509 H 1 LGD 0.0599
81 H29 -3.5843 -0.7340 -1.9751 H 1 LGD 0.0599
82 H30 -4.4459 0.2683 -3.1609 H 1 LGD 0.0599
83 H31 -0.8239 -2.3996 2.5716 H 1 LGD 0.0273
84 H32 -2.9368 -5.0336 4.3852 H 1 LGD 0.0504
85 H33 -2.4957 -3.8819 5.6588 H 1 LGD 0.0504
86 H34 -4.1102 -3.8249 4.9248 H 1 LGD 0.0504
87 H35 2.6151 2.7506 -0.9723 H 1 LGD 0.0560
88 H36 0.3888 -3.7885 0.7457 H 1 LGD 0.0244
89 H37 -0.4683 -2.0736 4.7826 H 1 LGD 0.4320
90 H38 4.6005 2.6935 -3.3009 H 1 LGD 0.0912
91 H39 3.7445 4.9575 -1.2019 H 1 LGD 0.0489
92 H40 4.4418 4.0736 0.1677 H 1 LGD 0.0489
93 H41 5.3271 4.1643 -1.3728 H 1 LGD 0.0489
94 H42 2.3738 -5.7436 1.8264 H 1 LGD 0.0736
95 H43 0.8370 -6.4788 1.4593 H 1 LGD 0.0736
96 H44 -2.5770 -5.3708 2.1405 H 1 LGD 0.0471
97 H45 -1.9791 -4.2845 0.8706 H 1 LGD 0.0471
98 H46 -1.3373 -5.9246 1.0191 H 1 LGD 0.0471
99 H47 -0.0516 -5.0093 4.3437 H 1 LGD 0.4405
100 H48 1.9472 3.4078 -3.6788 H 1 LGD 0.3967
101 H49 2.3710 -4.7631 -0.5831 H 1 LGD 0.0329
102 H50 2.3475 -6.5377 -0.5275 H 1 LGD 0.0329
103 H51 0.8551 -5.6369 -0.8637 H 1 LGD 0.0329
104 H52 -0.4510 2.7218 2.7800 H 1 LGD 0.0487
105 H53 -2.1366 2.4919 2.2797 H 1 LGD 0.0487
106 H54 -1.6383 2.0020 3.8841 H 1 LGD 0.0487
107 H55 -0.4112 0.6450 -3.5778 H 1 LGD 0.0343
108 H56 0.6284 0.7009 -5.0091 H 1 LGD 0.0343
109 H57 0.9163 -0.5257 -3.7477 H 1 LGD 0.0343
110 H58 2.7371 1.8456 -5.5404 H 1 LGD 0.0505
111 H59 4.3357 1.2161 -5.1031 H 1 LGD 0.0505
112 H60 2.9739 0.1043 -5.2617 H 1 LGD 0.0505
113 H61 0.2852 1.2822 4.8565 H 1 LGD 0.0436
114 H62 1.0563 -0.3104 4.9405 H 1 LGD 0.0436
115 H63 1.5113 0.8195 3.6513 H 1 LGD 0.0436
116 H64 -3.8371 5.7600 -2.7469 H 1 LGD 0.1010
117 H65 -2.8971 6.4493 -4.0930 H 1 LGD 0.1010
118 H66 -3.5926 4.8182 -4.2387 H 1 LGD 0.1010
119 H67 -0.7511 5.5921 -4.6372 H 1 LGD 0.1010
120 H68 -0.0097 4.2998 -3.6686 H 1 LGD 0.1010
121 H69 -1.3702 3.9289 -4.7576 H 1 LGD 0.1010
122 H70 -1.4783 5.6554 -2.3837 H 1 LGD 0.4676
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 1
5 3 6 1
6 3 7 1
7 4 8 1
8 5 9 1
9 6 10 1
10 6 11 1
11 8 12 1
12 8 13 1
13 9 14 1
14 9 15 1
15 10 16 1
16 11 17 1
17 11 18 1
18 12 19 1
19 12 20 1
20 13 21 1
21 14 22 1
22 14 23 2
23 16 24 1
24 16 25 1
25 17 26 1
26 17 27 2
27 19 28 1
28 21 29 1
29 22 30 1
30 22 31 1
31 24 32 1
32 25 33 1
33 26 34 1
34 30 35 1
35 30 36 1
36 32 37 1
37 32 38 1
38 33 39 1
39 34 40 1
40 35 41 1
41 35 42 1
42 37 43 1
43 40 44 1
44 21 28 1
45 33 37 1
46 34 35 1
47 2 45 1
48 38 46 1
49 32 47 1
50 2 48 1
51 48 49 1
52 19 50 1
53 50 51 1
54 50 52 1
55 1 53 1
56 3 54 1
57 5 55 1
58 5 56 1
59 6 57 1
60 7 58 1
61 7 59 1
62 7 60 1
63 8 61 1
64 9 62 1
65 11 63 1
66 12 64 1
67 15 65 1
68 15 66 1
69 15 67 1
70 16 68 1
71 18 69 1
72 18 70 1
73 18 71 1
74 19 72 1
75 20 73 1
76 21 74 1
77 22 75 1
78 24 76 1
79 24 77 1
80 28 78 1
81 28 79 1
82 29 80 1
83 29 81 1
84 29 82 1
85 30 83 1
86 31 84 1
87 31 85 1
88 31 86 1
89 33 87 1
90 34 88 1
91 36 89 1
92 37 90 1
93 39 91 1
94 39 92 1
95 39 93 1
96 40 94 1
97 40 95 1
98 41 96 1
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100 41 98 1
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102 43 100 1
103 44 101 1
104 44 102 1
105 44 103 1
106 45 104 1
107 45 105 1
108 45 106 1
109 46 107 1
110 46 108 1
111 46 109 1
112 47 110 1
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115 49 113 1
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118 51 116 1
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120 51 118 1
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122 52 120 1
123 52 121 1
124 50 122 1