@COMMENT
LIGANDBOX_ID = D00488-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00488
NAME = Pyrimethamine_(JAN/USP/INN)_Daraprim_(TN)
MOLECULAR_FORMULA = C12H13N4Cl
MOLECULAR_WEIGHT = 248.717
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 4
NUM_OF_ACCEPTOR = 2
NUM_OF_CHIRAL_ATOMS = 0
TPSA = 77.8200
HOMO = -8.7160
LUMO = -0.1489
mLOGD = 2.151
mLOGS = -3.809
mLOGPA = -5.112
@MOLECULE
D00488-01
30 31 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 26.2120 -18.2060 -0.2800 C.ar 1 LGD -0.4072
2 C2 24.8820 -18.8920 -0.3050 C.ar 1 LGD -0.0061
3 C3 27.3110 -18.6940 0.4820 C.ar 1 LGD 0.5368
4 C4 26.4480 -17.0100 -1.0100 C.ar 1 LGD 0.7463
5 C5 24.7310 -20.1700 -0.8950 C.ar 1 LGD -0.1197
6 C6 23.7380 -18.2700 0.2500 C.ar 1 LGD -0.1197
7 N1 28.5010 -18.0580 0.4970 N.ar 1 LGD -0.8087
8 C7 27.2130 -19.9400 1.3640 C.3 1 LGD -0.1323
9 N2 27.6410 -16.3860 -0.9900 N.ar 1 LGD -0.8479
10 N3 25.4550 -16.4570 -1.7830 N.pl3 1 LGD -0.9689
11 C8 23.4820 -20.8100 -0.9180 C.ar 1 LGD -0.1230
12 C9 22.4880 -18.9080 0.2260 C.ar 1 LGD -0.1230
13 C10 28.6150 -16.9370 -0.2410 C.ar 1 LGD 0.9349
14 C11 22.3610 -20.1780 -0.3560 C.ar 1 LGD 0.0251
15 N4 29.8250 -16.2980 -0.2210 N.pl3 1 LGD -0.9543
16 Cl1 20.8020 -20.9750 -0.3860 Cl 1 LGD -0.1159
17 C12 26.4300 -19.6780 2.6680 C.3 1 LGD -0.0867
18 H1 25.5910 -20.6630 -1.3400 H 1 LGD 0.1439
19 H2 23.8280 -17.2870 0.7050 H 1 LGD 0.1439
20 H3 26.7420 -20.7650 0.8180 H 1 LGD 0.0585
21 H4 28.2180 -20.2970 1.6270 H 1 LGD 0.0585
22 H5 25.7190 -15.7390 -2.4410 H 1 LGD 0.4370
23 H6 24.6420 -17.0210 -1.9830 H 1 LGD 0.4370
24 H7 23.3830 -21.7920 -1.3730 H 1 LGD 0.1469
25 H8 21.6210 -18.4180 0.6590 H 1 LGD 0.1469
26 H9 30.4830 -16.5690 0.4940 H 1 LGD 0.4399
27 H10 29.8610 -15.3560 -0.5800 H 1 LGD 0.4399
28 H11 26.4030 -20.5820 3.2880 H 1 LGD 0.0393
29 H12 26.9040 -18.8780 3.2500 H 1 LGD 0.0393
30 H13 25.3960 -19.3810 2.4550 H 1 LGD 0.0393
@BOND
1 1 2 1
2 1 3 ar
3 1 4 ar
4 2 5 ar
5 2 6 ar
6 3 7 ar
7 3 8 1
8 4 9 ar
9 4 10 1
10 5 11 ar
11 6 12 ar
12 7 13 ar
13 11 14 ar
14 13 15 1
15 14 16 1
16 9 13 ar
17 12 14 ar
18 8 17 1
19 5 18 1
20 6 19 1
21 8 20 1
22 8 21 1
23 10 22 1
24 10 23 1
25 11 24 1
26 12 25 1
27 15 26 1
28 15 27 1
29 17 28 1
30 17 29 1
31 17 30 1