@COMMENT
LIGANDBOX_ID = D00865-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00865
NAME = Amikacin_sulfate_(JP18/USP)_Amikin_(TN)
MOLECULAR_FORMULA = C22H43N5O13
MOLECULAR_WEIGHT = 585.608
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 17
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 16
TPSA = 331.9400
HOMO = -19.7533
LUMO = -11.5616
mLOGPA = -7.086
mLOGS = 4.186
mLOGD = -3.641
@MOLECULE
D00865-02
87 89 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.0949 -0.1192 -4.0917 C.3 1 LGD 0.1213
2 C2 0.5213 1.3136 -4.0346 C.3 1 LGD 0.1078
3 C3 1.0708 1.6285 -2.6241 C.3 1 LGD 0.0523
4 C4 2.1232 0.5624 -2.2479 C.3 1 LGD 0.0979
5 C5 1.5132 -0.8637 -2.2943 C.3 1 LGD 0.3447
6 O1 0.8901 -1.0749 -3.5935 O.3 1 LGD -0.3856
7 O2 0.5508 -1.0554 -1.2273 O.3 1 LGD -0.4631
8 C6 0.5007 -2.4027 -0.6915 C.3 1 LGD 0.1368
9 C7 1.0511 -2.4025 0.7657 C.3 1 LGD 0.1176
10 C8 0.0854 -1.7071 1.7558 C.3 1 LGD -0.1287
11 C9 -1.3427 -2.2994 1.7146 C.3 1 LGD 0.0928
12 C10 -1.9280 -2.3193 0.2694 C.3 1 LGD 0.1197
13 C11 -0.9544 -2.9527 -0.7751 C.3 1 LGD 0.1376
14 O3 -2.2332 -0.9664 -0.1403 O.3 1 LGD -0.4162
15 C12 -3.3713 -0.3613 0.5194 C.3 1 LGD 0.2902
16 C13 -1.4404 -0.2926 -3.3354 C.3 1 LGD 0.1098
17 O4 -2.4882 0.4495 -3.9573 O.3 1 LGD -0.6077
18 O5 -0.4226 2.3095 -4.4283 O.3 1 LGD -0.5904
19 N1 1.6785 2.9741 -2.6246 N.4 1 LGD -0.8139
20 O6 2.6962 0.8328 -0.9687 O.3 1 LGD -0.6495
21 N2 2.3515 -1.7236 0.8377 N.am 1 LGD -0.6272
22 C14 3.3135 -2.0543 1.7854 C.2 1 LGD 0.6136
23 C15 4.5755 -1.1855 1.9218 C.3 1 LGD 0.1024
24 C16 4.3333 0.0803 2.7878 C.3 1 LGD -0.1495
25 C17 3.3380 1.0830 2.1645 C.3 1 LGD 0.0923
26 N3 3.2116 2.2600 3.0417 N.4 1 LGD -0.8255
27 O7 -2.9275 0.3736 1.6829 O.3 1 LGD -0.4694
28 C18 -2.0184 1.4692 1.4247 C.3 1 LGD 0.1223
29 C19 -2.7552 2.5275 0.5698 C.3 1 LGD 0.1325
30 C20 -3.2827 1.8941 -0.7403 C.3 1 LGD 0.1281
31 C21 -4.1093 0.6143 -0.4426 C.3 1 LGD 0.0950
32 C22 -1.5739 2.0421 2.7867 C.3 1 LGD 0.1028
33 N4 -0.9356 0.9788 3.5867 N.4 1 LGD -0.8264
34 O8 -1.8710 3.6050 0.2627 O.3 1 LGD -0.6381
35 O9 -4.0923 2.8397 -1.4386 O.3 1 LGD -0.5727
36 O10 -4.4548 -0.0520 -1.6606 O.3 1 LGD -0.5900
37 O11 3.1476 -3.0330 2.4932 O.2 1 LGD -0.5149
38 O12 5.0699 -0.8266 0.6284 O.3 1 LGD -0.5320
39 N5 -1.3089 -3.6705 2.2586 N.4 1 LGD -0.8202
40 O13 -0.9165 -4.3679 -0.5748 O.3 1 LGD -0.6247
41 H1 -0.2872 -0.3555 -5.1461 H 1 LGD 0.1639
42 H2 1.3644 1.3360 -4.7375 H 1 LGD 0.1085
43 H3 0.2539 1.6069 -1.8996 H 1 LGD 0.1162
44 H4 2.9208 0.5932 -3.0019 H 1 LGD 0.1059
45 H5 2.3331 -1.5821 -2.1743 H 1 LGD 0.1274
46 H6 1.1375 -3.0650 -1.2936 H 1 LGD 0.1211
47 H7 1.1699 -3.4500 1.0716 H 1 LGD 0.1114
48 H8 0.4813 -1.7792 2.7770 H 1 LGD 0.0476
49 H9 0.0418 -0.6397 1.5145 H 1 LGD 0.0476
50 H10 -1.9924 -1.7037 2.3577 H 1 LGD 0.0907
51 H11 -2.8565 -2.9055 0.2675 H 1 LGD 0.0856
52 H12 -1.3428 -2.7526 -1.7796 H 1 LGD 0.1108
53 H13 -4.0736 -1.1434 0.8320 H 1 LGD 0.1126
54 H14 -1.7076 -1.3550 -3.3304 H 1 LGD 0.0343
55 H15 -1.3255 0.0394 -2.2995 H 1 LGD 0.0343
56 H16 -3.3014 0.2835 -3.4443 H 1 LGD 0.4549
57 H17 -1.2986 1.8784 -4.4545 H 1 LGD 0.4789
58 H18 2.4488 3.0054 -3.2773 H 1 LGD 0.4674
59 H19 0.9815 3.6476 -2.9135 H 1 LGD 0.4674
60 H20 3.5132 1.3402 -1.1246 H 1 LGD 0.4300
61 H21 2.5068 -0.9283 0.2352 H 1 LGD 0.3192
62 H22 5.3257 -1.8050 2.4310 H 1 LGD 0.1808
63 H23 3.9663 -0.2288 3.7753 H 1 LGD 0.1032
64 H24 5.2955 0.5816 2.9558 H 1 LGD 0.1032
65 H25 3.7047 1.4082 1.1897 H 1 LGD 0.0899
66 H26 2.3593 0.6154 2.0399 H 1 LGD 0.0899
67 H27 2.8828 1.9782 3.9543 H 1 LGD 0.4676
68 H28 4.1141 2.7046 3.1429 H 1 LGD 0.4676
69 H29 -1.1365 1.1145 0.8771 H 1 LGD 0.0539
70 H30 -3.6109 2.9052 1.1452 H 1 LGD 0.1033
71 H31 -2.4206 1.6219 -1.3595 H 1 LGD 0.0424
72 H32 -5.0315 0.9254 0.0663 H 1 LGD 0.1114
73 H33 -0.8685 2.8610 2.6302 H 1 LGD 0.1411
74 H34 -2.4443 2.4253 3.3238 H 1 LGD 0.1411
75 H35 -1.6007 0.2292 3.7197 H 1 LGD 0.4576
76 H36 -0.6605 1.3431 4.4885 H 1 LGD 0.4576
77 H37 -2.3290 4.1591 -0.3959 H 1 LGD 0.4798
78 H38 -4.6259 2.3420 -2.0840 H 1 LGD 0.4648
79 H39 -4.8769 -0.8983 -1.4271 H 1 LGD 0.4455
80 H40 4.3324 -0.4520 0.1167 H 1 LGD 0.3804
81 H41 -2.2483 -4.0340 2.3382 H 1 LGD 0.4796
82 H42 -0.8718 -3.6719 3.1696 H 1 LGD 0.4796
83 H43 -1.3858 -4.7868 -1.3189 H 1 LGD 0.4800
84 H44 2.0052 3.2038 -1.6972 H 1 LGD 0.4674
85 H45 2.5647 2.9234 2.6386 H 1 LGD 0.4676
86 H46 -0.1280 0.6204 3.0986 H 1 LGD 0.4576
87 H47 -0.7820 -4.2662 1.6331 H 1 LGD 0.4796
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 5 7 1
8 7 8 1
9 8 9 1
10 9 10 1
11 10 11 1
12 11 12 1
13 12 13 1
14 8 13 1
15 12 14 1
16 14 15 1
17 1 16 1
18 16 17 1
19 2 18 1
20 3 19 1
21 4 20 1
22 9 21 1
23 21 22 am
24 22 23 1
25 23 24 1
26 24 25 1
27 25 26 1
28 15 27 1
29 27 28 1
30 28 29 1
31 29 30 1
32 30 31 1
33 15 31 1
34 28 32 1
35 32 33 1
36 29 34 1
37 30 35 1
38 31 36 1
39 22 37 2
40 23 38 1
41 11 39 1
42 13 40 1
43 1 41 1
44 2 42 1
45 3 43 1
46 4 44 1
47 5 45 1
48 8 46 1
49 9 47 1
50 10 48 1
51 10 49 1
52 11 50 1
53 12 51 1
54 13 52 1
55 15 53 1
56 16 54 1
57 16 55 1
58 17 56 1
59 18 57 1
60 19 58 1
61 19 59 1
62 20 60 1
63 21 61 1
64 23 62 1
65 24 63 1
66 24 64 1
67 25 65 1
68 25 66 1
69 26 67 1
70 26 68 1
71 28 69 1
72 29 70 1
73 30 71 1
74 31 72 1
75 32 73 1
76 32 74 1
77 33 75 1
78 33 76 1
79 34 77 1
80 35 78 1
81 36 79 1
82 38 80 1
83 39 81 1
84 39 82 1
85 40 83 1
86 19 84 1
87 26 85 1
88 33 86 1
89 39 87 1