@COMMENT
LIGANDBOX_ID = D00865-03
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00865
NAME = Amikacin_sulfate_(JP18/USP)_Amikin_(TN)
MOLECULAR_FORMULA = C22H43N5O13
MOLECULAR_WEIGHT = 585.608
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 17
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 16
TPSA = 331.9400
HOMO = -19.7533
LUMO = -11.5616
mLOGPA = -7.086
mLOGS = 4.186
mLOGD = -3.641
@MOLECULE
D00865-03
87 89 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.6616 0.0012 -3.2391 C.3 1 LGD 0.1095
2 C2 -0.0739 1.4297 -3.4172 C.3 1 LGD 0.1034
3 C3 0.9713 1.6908 -2.3009 C.3 1 LGD 0.1064
4 C4 2.0524 0.5787 -2.3075 C.3 1 LGD 0.1019
5 C5 1.4037 -0.8319 -2.2289 C.3 1 LGD 0.3379
6 O1 0.4188 -0.9615 -3.2815 O.3 1 LGD -0.3690
7 O2 0.7687 -1.0013 -0.9407 O.3 1 LGD -0.4813
8 C6 0.6693 -2.3678 -0.4753 C.3 1 LGD 0.1475
9 C7 1.0821 -2.3946 1.0200 C.3 1 LGD 0.1256
10 C8 0.0254 -1.7200 1.9273 C.3 1 LGD -0.1246
11 C9 -1.3902 -2.3151 1.7373 C.3 1 LGD 0.0909
12 C10 -1.8391 -2.3126 0.2417 C.3 1 LGD 0.1104
13 C11 -0.7682 -2.9171 -0.7220 C.3 1 LGD 0.1234
14 O3 -2.1123 -0.9558 -0.1728 O.3 1 LGD -0.4330
15 C12 -3.2795 -0.3421 0.4222 C.3 1 LGD 0.2913
16 C13 -1.7079 -0.3687 -4.3161 C.3 1 LGD 0.1439
17 O4 -2.3394 -1.6054 -3.9891 O.3 1 LGD -0.6230
18 O5 0.5349 1.5801 -4.7051 O.3 1 LGD -0.6036
19 N1 1.6008 3.0106 -2.5012 N.4 1 LGD -0.8173
20 O6 2.9771 0.7691 -1.2318 O.3 1 LGD -0.6596
21 N2 2.3590 -1.6856 1.1703 N.am 1 LGD -0.6280
22 C14 3.2867 -1.9907 2.1563 C.2 1 LGD 0.6141
23 C15 4.5527 -1.1263 2.2805 C.3 1 LGD 0.1028
24 C16 4.2780 0.2279 2.9876 C.3 1 LGD -0.1511
25 C17 3.3052 1.1506 2.2185 C.3 1 LGD 0.0870
26 N3 3.1527 2.4175 2.9551 N.4 1 LGD -0.8249
27 O7 -2.8833 0.4389 1.5723 O.3 1 LGD -0.4668
28 C18 -1.9568 1.5189 1.3066 C.3 1 LGD 0.1242
29 C19 -2.6449 2.5410 0.3680 C.3 1 LGD 0.1283
30 C20 -3.1349 1.8510 -0.9279 C.3 1 LGD 0.0937
31 C21 -3.9796 0.5917 -0.6030 C.3 1 LGD 0.0967
32 C22 -1.5781 2.1551 2.6606 C.3 1 LGD 0.1031
33 N4 -1.0006 1.1273 3.5486 N.4 1 LGD -0.8257
34 O8 -1.7325 3.5888 0.0394 O.3 1 LGD -0.6492
35 O9 -3.9098 2.7655 -1.7020 O.3 1 LGD -0.5787
36 O10 -4.2799 -0.1284 -1.7995 O.3 1 LGD -0.5492
37 O11 3.0894 -2.9376 2.8979 O.2 1 LGD -0.5118
38 O12 5.1263 -0.9100 0.9876 O.3 1 LGD -0.5282
39 N5 -1.4009 -3.6944 2.2609 N.4 1 LGD -0.8209
40 O13 -0.7453 -4.3368 -0.5561 O.3 1 LGD -0.6082
41 H1 -1.1540 -0.0515 -2.2644 H 1 LGD 0.0581
42 H2 -0.8854 2.1610 -3.3113 H 1 LGD 0.0726
43 H3 0.4670 1.6830 -1.3322 H 1 LGD 0.1020
44 H4 2.5978 0.6345 -3.2587 H 1 LGD 0.1220
45 H5 2.1870 -1.5873 -2.3635 H 1 LGD 0.1359
46 H6 1.3808 -2.9992 -1.0242 H 1 LGD 0.1218
47 H7 1.2003 -3.4428 1.3238 H 1 LGD 0.1145
48 H8 0.3248 -1.8091 2.9794 H 1 LGD 0.0479
49 H9 -0.0023 -0.6488 1.7010 H 1 LGD 0.0479
50 H10 -2.1008 -1.7317 2.3252 H 1 LGD 0.0949
51 H11 -2.7609 -2.9010 0.1434 H 1 LGD 0.0865
52 H12 -1.0551 -2.6848 -1.7556 H 1 LGD 0.1298
53 H13 -3.9891 -1.1185 0.7336 H 1 LGD 0.1282
54 H14 -2.4614 0.4271 -4.3754 H 1 LGD 0.0623
55 H15 -1.2174 -0.4444 -5.2949 H 1 LGD 0.0623
56 H16 -2.8767 -1.8719 -4.7568 H 1 LGD 0.4640
57 H17 -0.1583 1.4760 -5.3808 H 1 LGD 0.4771
58 H18 2.0098 3.0439 -3.4254 H 1 LGD 0.4709
59 H19 0.9060 3.7396 -2.4230 H 1 LGD 0.4709
60 H20 3.8601 0.8821 -1.6280 H 1 LGD 0.4569
61 H21 2.5493 -0.9205 0.5394 H 1 LGD 0.3166
62 H22 5.2622 -1.6955 2.8956 H 1 LGD 0.1807
63 H23 3.8734 0.0292 3.9887 H 1 LGD 0.1023
64 H24 5.2334 0.7484 3.1354 H 1 LGD 0.1023
65 H25 3.6983 1.3616 1.2222 H 1 LGD 0.0935
66 H26 2.3293 0.6709 2.1217 H 1 LGD 0.0935
67 H27 2.8011 2.2362 3.8847 H 1 LGD 0.4664
68 H28 4.0512 2.8751 3.0301 H 1 LGD 0.4664
69 H29 -1.0500 1.1348 0.8224 H 1 LGD 0.0505
70 H30 -3.5152 2.9600 0.8906 H 1 LGD 0.1050
71 H31 -2.2556 1.5444 -1.5016 H 1 LGD 0.0218
72 H32 -4.9192 0.9277 -0.1450 H 1 LGD 0.1425
73 H33 -0.8538 2.9569 2.5026 H 1 LGD 0.1384
74 H34 -2.4711 2.5748 3.1285 H 1 LGD 0.1384
75 H35 -1.6804 0.3898 3.6764 H 1 LGD 0.4595
76 H36 -0.7768 1.5324 4.4471 H 1 LGD 0.4595
77 H37 -2.1909 4.1632 -0.6011 H 1 LGD 0.4763
78 H38 -4.4774 2.2338 -2.2894 H 1 LGD 0.4656
79 H39 -3.4994 -0.6690 -2.0208 H 1 LGD 0.4268
80 H40 4.4465 -0.5137 0.4158 H 1 LGD 0.3819
81 H41 -2.3384 -4.0695 2.2279 H 1 LGD 0.4790
82 H42 -1.0722 -3.7034 3.2164 H 1 LGD 0.4790
83 H43 -1.5213 -4.7022 -1.0178 H 1 LGD 0.4639
84 H44 2.3212 3.1518 -1.8075 H 1 LGD 0.4709
85 H45 2.5143 3.0281 2.4648 H 1 LGD 0.4664
86 H46 -0.1689 0.7384 3.1293 H 1 LGD 0.4595
87 H47 -0.7959 -4.2740 1.6939 H 1 LGD 0.4790
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 5 7 1
8 7 8 1
9 8 9 1
10 9 10 1
11 10 11 1
12 11 12 1
13 12 13 1
14 8 13 1
15 12 14 1
16 14 15 1
17 1 16 1
18 16 17 1
19 2 18 1
20 3 19 1
21 4 20 1
22 9 21 1
23 21 22 am
24 22 23 1
25 23 24 1
26 24 25 1
27 25 26 1
28 15 27 1
29 27 28 1
30 28 29 1
31 29 30 1
32 30 31 1
33 15 31 1
34 28 32 1
35 32 33 1
36 29 34 1
37 30 35 1
38 31 36 1
39 22 37 2
40 23 38 1
41 11 39 1
42 13 40 1
43 1 41 1
44 2 42 1
45 3 43 1
46 4 44 1
47 5 45 1
48 8 46 1
49 9 47 1
50 10 48 1
51 10 49 1
52 11 50 1
53 12 51 1
54 13 52 1
55 15 53 1
56 16 54 1
57 16 55 1
58 17 56 1
59 18 57 1
60 19 58 1
61 19 59 1
62 20 60 1
63 21 61 1
64 23 62 1
65 24 63 1
66 24 64 1
67 25 65 1
68 25 66 1
69 26 67 1
70 26 68 1
71 28 69 1
72 29 70 1
73 30 71 1
74 31 72 1
75 32 73 1
76 32 74 1
77 33 75 1
78 33 76 1
79 34 77 1
80 35 78 1
81 36 79 1
82 38 80 1
83 39 81 1
84 39 82 1
85 40 83 1
86 19 84 1
87 26 85 1
88 33 86 1
89 39 87 1