@COMMENT
LIGANDBOX_ID = D00865-04
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00865
NAME = Amikacin_sulfate_(JP18/USP)_Amikin_(TN)
MOLECULAR_FORMULA = C22H43N5O13
MOLECULAR_WEIGHT = 585.608
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 17
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 16
TPSA = 331.9400
HOMO = -19.7533
LUMO = -11.5616
mLOGPA = -7.086
mLOGS = 4.186
mLOGD = -3.641
@MOLECULE
D00865-04
87 89 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.5862 0.0662 -3.3571 C.3 1 LGD 0.1358
2 C2 0.0721 1.4586 -3.5784 C.3 1 LGD 0.0952
3 C3 1.1397 1.7340 -2.4873 C.3 1 LGD 0.0527
4 C4 2.1571 0.5631 -2.4376 C.3 1 LGD 0.0979
5 C5 1.4575 -0.8247 -2.3355 C.3 1 LGD 0.3279
6 O1 0.4600 -0.9340 -3.3765 O.3 1 LGD -0.3688
7 O2 0.8300 -0.9733 -1.0403 O.3 1 LGD -0.5183
8 C6 0.7278 -2.3347 -0.5635 C.3 1 LGD 0.1529
9 C7 1.1504 -2.3543 0.9290 C.3 1 LGD 0.1220
10 C8 0.0991 -1.6797 1.8426 C.3 1 LGD -0.1230
11 C9 -1.3144 -2.2833 1.6641 C.3 1 LGD 0.0900
12 C10 -1.7748 -2.2797 0.1723 C.3 1 LGD 0.1077
13 C11 -0.7119 -2.8799 -0.8022 C.3 1 LGD 0.1222
14 O3 -2.0610 -0.9225 -0.2336 O.3 1 LGD -0.4450
15 C12 -3.2482 -0.3428 0.3601 C.3 1 LGD 0.2851
16 C13 -1.6211 -0.2937 -4.4486 C.3 1 LGD 0.1496
17 O4 -2.2552 -1.5342 -4.1401 O.3 1 LGD -0.6329
18 O5 -0.9077 2.4977 -3.5735 O.3 1 LGD -0.5977
19 N1 0.4898 1.8857 -1.1685 N.4 1 LGD -0.8213
20 O6 3.0889 0.7421 -1.3650 O.3 1 LGD -0.6561
21 N2 2.4307 -1.6489 1.0696 N.am 1 LGD -0.6299
22 C14 3.3570 -1.9496 2.0585 C.2 1 LGD 0.6147
23 C15 4.6349 -1.1009 2.1674 C.3 1 LGD 0.1036
24 C16 4.3850 0.2546 2.8806 C.3 1 LGD -0.1504
25 C17 3.4126 1.1903 2.1273 C.3 1 LGD 0.0867
26 N3 3.2854 2.4550 2.8731 N.4 1 LGD -0.8254
27 O7 -2.8831 0.4254 1.5295 O.3 1 LGD -0.4592
28 C18 -1.9720 1.5240 1.2961 C.3 1 LGD 0.1299
29 C19 -2.6583 2.5475 0.3566 C.3 1 LGD 0.1153
30 C20 -3.1277 1.8670 -0.9521 C.3 1 LGD 0.0986
31 C21 -3.9567 0.5929 -0.6554 C.3 1 LGD 0.0968
32 C22 -1.6247 2.1475 2.6641 C.3 1 LGD 0.1017
33 N4 -1.0310 1.1200 3.5421 N.4 1 LGD -0.8252
34 O8 -1.7517 3.6066 0.0472 O.3 1 LGD -0.6672
35 O9 -3.9062 2.7824 -1.7210 O.3 1 LGD -0.5656
36 O10 -4.2330 -0.1143 -1.8657 O.3 1 LGD -0.5400
37 O11 3.1487 -2.8815 2.8160 O.2 1 LGD -0.5121
38 O12 5.1977 -0.8900 0.8685 O.3 1 LGD -0.5245
39 N5 -1.3132 -3.6642 2.1842 N.4 1 LGD -0.8203
40 O13 -0.6890 -4.3000 -0.6416 O.3 1 LGD -0.6060
41 H1 -1.0912 0.0501 -2.3865 H 1 LGD 0.0324
42 H2 0.5739 1.4431 -4.5549 H 1 LGD 0.1255
43 H3 1.6642 2.6622 -2.7228 H 1 LGD 0.1289
44 H4 2.7098 0.5683 -3.3862 H 1 LGD 0.1397
45 H5 2.2162 -1.6044 -2.4740 H 1 LGD 0.1451
46 H6 1.4340 -2.9738 -1.1106 H 1 LGD 0.1289
47 H7 1.2699 -3.4019 1.2345 H 1 LGD 0.1176
48 H8 0.4064 -1.7670 2.8926 H 1 LGD 0.0439
49 H9 0.0656 -0.6084 1.6164 H 1 LGD 0.0439
50 H10 -2.0236 -1.7058 2.2593 H 1 LGD 0.0938
51 H11 -2.6939 -2.8736 0.0807 H 1 LGD 0.0915
52 H12 -1.0068 -2.6435 -1.8328 H 1 LGD 0.1332
53 H13 -3.9458 -1.1384 0.6493 H 1 LGD 0.1344
54 H14 -2.3772 0.4990 -4.5126 H 1 LGD 0.0744
55 H15 -1.1165 -0.3572 -5.4212 H 1 LGD 0.0744
56 H16 -2.7872 -1.7904 -4.9150 H 1 LGD 0.4648
57 H17 -0.5839 3.2142 -4.1486 H 1 LGD 0.4645
58 H18 0.0723 1.0024 -0.9060 H 1 LGD 0.4564
59 H19 1.1851 2.1397 -0.4833 H 1 LGD 0.4564
60 H20 3.8271 1.2759 -1.7113 H 1 LGD 0.4621
61 H21 2.6351 -0.9049 0.4183 H 1 LGD 0.3158
62 H22 5.3441 -1.6797 2.7738 H 1 LGD 0.1824
63 H23 3.9912 0.0578 3.8864 H 1 LGD 0.1047
64 H24 5.3481 0.7638 3.0175 H 1 LGD 0.1047
65 H25 3.7956 1.4010 1.1270 H 1 LGD 0.0886
66 H26 2.4305 0.7212 2.0419 H 1 LGD 0.0886
67 H27 2.9403 2.2727 3.8051 H 1 LGD 0.4679
68 H28 4.1915 2.8983 2.9432 H 1 LGD 0.4679
69 H29 -1.0515 1.1577 0.8279 H 1 LGD 0.0098
70 H30 -3.5383 2.9542 0.8728 H 1 LGD 0.1173
71 H31 -2.2405 1.5746 -1.5202 H 1 LGD 0.0153
72 H32 -4.9058 0.9072 -0.2014 H 1 LGD 0.1473
73 H33 -0.9184 2.9692 2.5276 H 1 LGD 0.1432
74 H34 -2.5326 2.5382 3.1285 H 1 LGD 0.1432
75 H35 -1.6949 0.3660 3.6558 H 1 LGD 0.4610
76 H36 -0.8238 1.5184 4.4478 H 1 LGD 0.4610
77 H37 -2.2357 4.2249 -0.5319 H 1 LGD 0.4966
78 H38 -4.3650 2.2631 -2.4062 H 1 LGD 0.4700
79 H39 -3.4306 -0.6123 -2.1066 H 1 LGD 0.4258
80 H40 4.5255 -0.4664 0.3069 H 1 LGD 0.3854
81 H41 -2.2491 -4.0441 2.1589 H 1 LGD 0.4806
82 H42 -0.9758 -3.6746 3.1366 H 1 LGD 0.4806
83 H43 -1.4674 -4.6638 -1.1009 H 1 LGD 0.4672
84 H44 -0.2264 2.6001 -1.2153 H 1 LGD 0.4564
85 H45 2.6525 3.0804 2.3949 H 1 LGD 0.4679
86 H46 -0.1860 0.7559 3.1274 H 1 LGD 0.4610
87 H47 -0.7110 -4.2398 1.6103 H 1 LGD 0.4806
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 5 7 1
8 7 8 1
9 8 9 1
10 9 10 1
11 10 11 1
12 11 12 1
13 12 13 1
14 8 13 1
15 12 14 1
16 14 15 1
17 1 16 1
18 16 17 1
19 2 18 1
20 3 19 1
21 4 20 1
22 9 21 1
23 21 22 am
24 22 23 1
25 23 24 1
26 24 25 1
27 25 26 1
28 15 27 1
29 27 28 1
30 28 29 1
31 29 30 1
32 30 31 1
33 15 31 1
34 28 32 1
35 32 33 1
36 29 34 1
37 30 35 1
38 31 36 1
39 22 37 2
40 23 38 1
41 11 39 1
42 13 40 1
43 1 41 1
44 2 42 1
45 3 43 1
46 4 44 1
47 5 45 1
48 8 46 1
49 9 47 1
50 10 48 1
51 10 49 1
52 11 50 1
53 12 51 1
54 13 52 1
55 15 53 1
56 16 54 1
57 16 55 1
58 17 56 1
59 18 57 1
60 19 58 1
61 19 59 1
62 20 60 1
63 21 61 1
64 23 62 1
65 24 63 1
66 24 64 1
67 25 65 1
68 25 66 1
69 26 67 1
70 26 68 1
71 28 69 1
72 29 70 1
73 30 71 1
74 31 72 1
75 32 73 1
76 32 74 1
77 33 75 1
78 33 76 1
79 34 77 1
80 35 78 1
81 36 79 1
82 38 80 1
83 39 81 1
84 39 82 1
85 40 83 1
86 19 84 1
87 26 85 1
88 33 86 1
89 39 87 1