@COMMENT
LIGANDBOX_ID = D00865-05
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00865
NAME = Amikacin_sulfate_(JP18/USP)_Amikin_(TN)
MOLECULAR_FORMULA = C22H43N5O13
MOLECULAR_WEIGHT = 585.608
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 17
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 16
TPSA = 331.9400
HOMO = -19.7533
LUMO = -11.5616
mLOGPA = -7.086
mLOGS = 4.186
mLOGD = -3.641
@MOLECULE
D00865-05
87 89 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.6525 0.0797 -3.2180 C.3 1 LGD 0.1308
2 C2 0.0375 1.4536 -3.4459 C.3 1 LGD 0.0991
3 C3 1.1325 1.6589 -2.3701 C.3 1 LGD 0.1126
4 C4 2.1418 0.4814 -2.3966 C.3 1 LGD 0.1108
5 C5 1.4007 -0.8793 -2.2793 C.3 1 LGD 0.3082
6 O1 0.3600 -0.9530 -3.2823 O.3 1 LGD -0.3738
7 O2 0.8263 -0.9993 -0.9571 O.3 1 LGD -0.4881
8 C6 0.6940 -2.3583 -0.4717 C.3 1 LGD 0.1469
9 C7 1.0975 -2.3859 1.0274 C.3 1 LGD 0.1242
10 C8 0.0396 -1.7080 1.9293 C.3 1 LGD -0.1246
11 C9 -1.3703 -2.3147 1.7410 C.3 1 LGD 0.0903
12 C10 -1.8221 -2.3035 0.2470 C.3 1 LGD 0.1105
13 C11 -0.7500 -2.8921 -0.7266 C.3 1 LGD 0.1240
14 O3 -2.1153 -0.9461 -0.1509 O.3 1 LGD -0.4302
15 C12 -3.2893 -0.3636 0.4660 C.3 1 LGD 0.2900
16 C13 -1.7337 -0.2385 -4.2776 C.3 1 LGD 0.1468
17 O4 -2.3847 -1.4704 -3.9692 O.3 1 LGD -0.6265
18 O5 -0.9069 2.5226 -3.3770 O.3 1 LGD -0.6145
19 N1 1.8362 2.9350 -2.6052 N.4 1 LGD -0.8155
20 O6 2.8981 0.5226 -3.6113 O.3 1 LGD -0.5840
21 N2 2.3837 -1.6972 1.1958 N.am 1 LGD -0.6251
22 C14 3.2802 -2.0044 2.2106 C.2 1 LGD 0.6146
23 C15 4.5576 -1.1602 2.3621 C.3 1 LGD 0.0998
24 C16 4.2877 0.2087 3.0435 C.3 1 LGD -0.1532
25 C17 3.3380 1.1331 2.2473 C.3 1 LGD 0.0881
26 N3 3.1866 2.4092 2.9688 N.4 1 LGD -0.8248
27 O7 -2.8963 0.4115 1.6216 O.3 1 LGD -0.4708
28 C18 -1.9958 1.5133 1.3580 C.3 1 LGD 0.1233
29 C19 -2.7157 2.5310 0.4394 C.3 1 LGD 0.1335
30 C20 -3.2117 1.8448 -0.8562 C.3 1 LGD 0.0913
31 C21 -4.0253 0.5657 -0.5365 C.3 1 LGD 0.0963
32 C22 -1.6140 2.1436 2.7137 C.3 1 LGD 0.1015
33 N4 -1.0123 1.1176 3.5875 N.4 1 LGD -0.8254
34 O8 -1.8260 3.5966 0.1078 O.3 1 LGD -0.6418
35 O9 -4.0133 2.7528 -1.6105 O.3 1 LGD -0.5725
36 O10 -4.3263 -0.1468 -1.7374 O.3 1 LGD -0.5491
37 O11 3.0470 -2.9389 2.9575 O.2 1 LGD -0.5067
38 O12 5.1780 -0.9743 1.0863 O.3 1 LGD -0.5174
39 N5 -1.3698 -3.6982 2.2539 N.4 1 LGD -0.8210
40 O13 -0.7337 -4.3142 -0.5826 O.3 1 LGD -0.6126
41 H1 -1.1191 0.0707 -2.2285 H 1 LGD 0.0596
42 H2 0.5089 1.4482 -4.4376 H 1 LGD 0.1051
43 H3 0.6532 1.6959 -1.3895 H 1 LGD 0.0994
44 H4 2.8228 0.5819 -1.5422 H 1 LGD 0.0250
45 H5 2.1235 -1.6872 -2.4447 H 1 LGD 0.1252
46 H6 1.3995 -3.0091 -1.0055 H 1 LGD 0.1182
47 H7 1.2020 -3.4361 1.3296 H 1 LGD 0.1147
48 H8 0.3374 -1.7904 2.9825 H 1 LGD 0.0485
49 H9 0.0068 -0.6381 1.6965 H 1 LGD 0.0485
50 H10 -2.0837 -1.7417 2.3356 H 1 LGD 0.0986
51 H11 -2.7379 -2.9013 0.1472 H 1 LGD 0.0886
52 H12 -1.0376 -2.6430 -1.7561 H 1 LGD 0.1327
53 H13 -3.9781 -1.1585 0.7769 H 1 LGD 0.1249
54 H14 -2.4735 0.5715 -4.3019 H 1 LGD 0.0651
55 H15 -1.2642 -0.2962 -5.2680 H 1 LGD 0.0651
56 H16 -2.9173 -1.7215 -4.7453 H 1 LGD 0.4623
57 H17 -1.0939 2.8135 -4.2876 H 1 LGD 0.4675
58 H18 2.3278 2.8806 -3.4872 H 1 LGD 0.4714
59 H19 1.1626 3.6878 -2.6405 H 1 LGD 0.4714
60 H20 3.4703 -0.2650 -3.6410 H 1 LGD 0.4743
61 H21 2.6063 -0.9485 0.5583 H 1 LGD 0.2987
62 H22 5.2362 -1.7341 3.0071 H 1 LGD 0.1846
63 H23 3.8640 0.0291 4.0402 H 1 LGD 0.1062
64 H24 5.2467 0.7198 3.2007 H 1 LGD 0.1062
65 H25 3.7490 1.3292 1.2551 H 1 LGD 0.0867
66 H26 2.3585 0.6626 2.1412 H 1 LGD 0.0867
67 H27 2.8219 2.2404 3.8958 H 1 LGD 0.4693
68 H28 4.0874 2.8609 3.0512 H 1 LGD 0.4693
69 H29 -1.0870 1.1530 0.8595 H 1 LGD 0.0454
70 H30 -3.5861 2.9308 0.9766 H 1 LGD 0.1031
71 H31 -2.3354 1.5571 -1.4426 H 1 LGD 0.0395
72 H32 -4.9652 0.8761 -0.0614 H 1 LGD 0.1419
73 H33 -0.9037 2.9579 2.5552 H 1 LGD 0.1396
74 H34 -2.5087 2.5461 3.1935 H 1 LGD 0.1396
75 H35 -1.6805 0.3700 3.7174 H 1 LGD 0.4573
76 H36 -0.7843 1.5198 4.4864 H 1 LGD 0.4573
77 H37 -2.2243 4.0617 -0.6510 H 1 LGD 0.4778
78 H38 -4.5042 2.2239 -2.2653 H 1 LGD 0.4613
79 H39 -3.5157 -0.6125 -2.0141 H 1 LGD 0.4256
80 H40 4.5681 -0.4740 0.5185 H 1 LGD 0.3706
81 H41 -2.3062 -4.0768 2.2272 H 1 LGD 0.4789
82 H42 -1.0320 -3.7133 3.2062 H 1 LGD 0.4789
83 H43 -1.4876 -4.6722 -1.0852 H 1 LGD 0.4675
84 H44 2.5022 3.1075 -1.8667 H 1 LGD 0.4714
85 H45 2.5587 3.0205 2.4659 H 1 LGD 0.4693
86 H46 -0.1800 0.7436 3.1563 H 1 LGD 0.4573
87 H47 -0.7686 -4.2713 1.6765 H 1 LGD 0.4789
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 5 7 1
8 7 8 1
9 8 9 1
10 9 10 1
11 10 11 1
12 11 12 1
13 12 13 1
14 8 13 1
15 12 14 1
16 14 15 1
17 1 16 1
18 16 17 1
19 2 18 1
20 3 19 1
21 4 20 1
22 9 21 1
23 21 22 am
24 22 23 1
25 23 24 1
26 24 25 1
27 25 26 1
28 15 27 1
29 27 28 1
30 28 29 1
31 29 30 1
32 30 31 1
33 15 31 1
34 28 32 1
35 32 33 1
36 29 34 1
37 30 35 1
38 31 36 1
39 22 37 2
40 23 38 1
41 11 39 1
42 13 40 1
43 1 41 1
44 2 42 1
45 3 43 1
46 4 44 1
47 5 45 1
48 8 46 1
49 9 47 1
50 10 48 1
51 10 49 1
52 11 50 1
53 12 51 1
54 13 52 1
55 15 53 1
56 16 54 1
57 16 55 1
58 17 56 1
59 18 57 1
60 19 58 1
61 19 59 1
62 20 60 1
63 21 61 1
64 23 62 1
65 24 63 1
66 24 64 1
67 25 65 1
68 25 66 1
69 26 67 1
70 26 68 1
71 28 69 1
72 29 70 1
73 30 71 1
74 31 72 1
75 32 73 1
76 32 74 1
77 33 75 1
78 33 76 1
79 34 77 1
80 35 78 1
81 36 79 1
82 38 80 1
83 39 81 1
84 39 82 1
85 40 83 1
86 19 84 1
87 26 85 1
88 33 86 1
89 39 87 1