@COMMENT
LIGANDBOX_ID = D00865-06
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00865
NAME = Amikacin_sulfate_(JP18/USP)_Amikin_(TN)
MOLECULAR_FORMULA = C22H43N5O13
MOLECULAR_WEIGHT = 585.608
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 17
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 16
TPSA = 331.9400
HOMO = -19.7533
LUMO = -11.5616
mLOGPA = -7.086
mLOGS = 4.186
mLOGD = -3.641
@MOLECULE
D00865-06
87 89 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -3.2009 2.2098 0.1378 C.3 1 LGD 0.1307
2 C2 -2.7835 3.7002 -0.0183 C.3 1 LGD 0.1026
3 C3 -1.7855 4.0909 1.1005 C.3 1 LGD 0.0834
4 C4 -0.5905 3.1056 1.1520 C.3 1 LGD 0.0798
5 C5 -1.1037 1.6386 1.2073 C.3 1 LGD 0.3557
6 O1 -1.9970 1.4126 0.1006 O.3 1 LGD -0.4322
7 O2 0.0059 0.7278 1.0680 O.3 1 LGD -0.4240
8 C6 0.5309 0.1570 2.2900 C.3 1 LGD 0.1156
9 C7 0.3655 -1.3877 2.2349 C.3 1 LGD 0.1230
10 C8 1.2687 -2.0345 1.1529 C.3 1 LGD -0.1291
11 C9 2.7584 -1.6202 1.2695 C.3 1 LGD 0.0944
12 C10 2.9485 -0.0748 1.3747 C.3 1 LGD 0.1463
13 C11 2.0206 0.5805 2.4431 C.3 1 LGD 0.1376
14 O3 2.6547 0.5385 0.0984 O.3 1 LGD -0.4333
15 C12 3.6377 0.3537 -0.9453 C.3 1 LGD 0.2969
16 C13 -4.1336 1.7258 -0.9995 C.3 1 LGD 0.1515
17 O4 -4.4752 0.3508 -0.8206 O.3 1 LGD -0.6351
18 O5 -3.9250 4.5557 0.0478 O.3 1 LGD -0.5811
19 N1 -1.3035 5.4698 0.8837 N.4 1 LGD -0.8160
20 O6 0.2186 3.4006 2.2907 O.3 1 LGD -0.5849
21 N2 -1.0332 -1.7364 1.9514 N.am 1 LGD -0.6221
22 C14 -1.6018 -2.9362 2.3605 C.2 1 LGD 0.6187
23 C15 -3.0130 -3.3085 1.8751 C.3 1 LGD 0.1032
24 C16 -2.9967 -3.9302 0.4534 C.3 1 LGD -0.1537
25 C17 -2.5001 -2.9622 -0.6444 C.3 1 LGD 0.0838
26 N3 -2.5500 -3.6440 -1.9498 N.4 1 LGD -0.8221
27 O7 3.3324 -0.8392 -1.7043 O.3 1 LGD -0.4714
28 C18 2.0490 -0.8498 -2.3745 C.3 1 LGD 0.1175
29 C19 2.0225 0.2940 -3.4156 C.3 1 LGD 0.1375
30 C20 2.3041 1.6516 -2.7255 C.3 1 LGD 0.0912
31 C21 3.6171 1.5776 -1.9027 C.3 1 LGD 0.0937
32 C22 1.8741 -2.2341 -3.0325 C.3 1 LGD 0.1044
33 N4 1.9564 -3.2846 -1.9990 N.4 1 LGD -0.8262
34 O8 0.7505 0.3315 -4.0617 O.3 1 LGD -0.6237
35 O9 2.4088 2.6804 -3.7091 O.3 1 LGD -0.5739
36 O10 3.8012 2.7810 -1.1570 O.3 1 LGD -0.5493
37 O11 -0.9767 -3.6756 3.1014 O.2 1 LGD -0.5282
38 O12 -3.8690 -2.1623 1.9151 O.3 1 LGD -0.5332
39 N5 3.3372 -2.2664 2.4625 N.4 1 LGD -0.8206
40 O13 2.4739 0.2301 3.7529 O.3 1 LGD -0.6270
41 H1 -3.7116 2.0720 1.1003 H 1 LGD 0.0974
42 H2 -2.2865 3.8243 -0.9896 H 1 LGD 0.0609
43 H3 -2.3090 4.0539 2.0583 H 1 LGD 0.1521
44 H4 0.0045 3.2191 0.2363 H 1 LGD 0.0672
45 H5 -1.6407 1.4494 2.1450 H 1 LGD 0.0816
46 H6 -0.0292 0.5353 3.1555 H 1 LGD 0.1055
47 H7 0.6507 -1.7892 3.2160 H 1 LGD 0.1077
48 H8 1.1882 -3.1278 1.2062 H 1 LGD 0.0542
49 H9 0.8913 -1.7498 0.1661 H 1 LGD 0.0542
50 H10 3.2988 -1.9896 0.3966 H 1 LGD 0.0902
51 H11 3.9903 0.1447 1.6428 H 1 LGD 0.0970
52 H12 2.0930 1.6678 2.3247 H 1 LGD 0.0953
53 H13 4.6370 0.2636 -0.5026 H 1 LGD 0.1277
54 H14 -5.0468 2.3345 -0.9995 H 1 LGD 0.0624
55 H15 -3.6355 1.8676 -1.9672 H 1 LGD 0.0624
56 H16 -5.2350 0.1649 -1.4011 H 1 LGD 0.4448
57 H17 -4.2878 4.6444 -0.8516 H 1 LGD 0.4601
58 H18 -0.7956 5.5301 0.0129 H 1 LGD 0.4736
59 H19 -2.0976 6.0949 0.8482 H 1 LGD 0.4736
60 H20 0.9561 3.9636 1.9960 H 1 LGD 0.4307
61 H21 -1.5793 -1.1051 1.3840 H 1 LGD 0.3225
62 H22 -3.3930 -4.0639 2.5758 H 1 LGD 0.1749
63 H23 -2.3569 -4.8226 0.4649 H 1 LGD 0.1003
64 H24 -4.0087 -4.2765 0.2059 H 1 LGD 0.1003
65 H25 -3.1369 -2.0761 -0.6794 H 1 LGD 0.1026
66 H26 -1.4731 -2.6547 -0.4377 H 1 LGD 0.1026
67 H27 -1.9623 -4.4657 -1.9332 H 1 LGD 0.4672
68 H28 -3.5002 -3.9261 -2.1487 H 1 LGD 0.4672
69 H29 1.2388 -0.6882 -1.6544 H 1 LGD 0.0619
70 H30 2.8086 0.1084 -4.1598 H 1 LGD 0.0975
71 H31 1.4747 1.8768 -2.0418 H 1 LGD 0.0399
72 H32 4.4520 1.4600 -2.6061 H 1 LGD 0.1443
73 H33 0.9059 -2.2849 -3.5350 H 1 LGD 0.1410
74 H34 2.6632 -2.3904 -3.7713 H 1 LGD 0.1410
75 H35 2.8559 -3.2208 -1.5422 H 1 LGD 0.4575
76 H36 1.8636 -4.1965 -2.4252 H 1 LGD 0.4575
77 H37 0.7088 1.1775 -4.5441 H 1 LGD 0.4751
78 H38 2.8826 3.4242 -3.2948 H 1 LGD 0.4550
79 H39 3.2671 2.6963 -0.3471 H 1 LGD 0.4047
80 H40 -3.6385 -1.5800 1.1703 H 1 LGD 0.3935
81 H41 4.3320 -2.0937 2.4994 H 1 LGD 0.4789
82 H42 3.1703 -3.2623 2.4344 H 1 LGD 0.4789
83 H43 2.0960 0.8738 4.3792 H 1 LGD 0.4795
84 H44 -0.7018 5.7429 1.6482 H 1 LGD 0.4736
85 H45 -2.2354 -3.0177 -2.6778 H 1 LGD 0.4672
86 H46 1.2272 -3.1501 -1.3141 H 1 LGD 0.4575
87 H47 2.9101 -1.8772 3.2931 H 1 LGD 0.4789
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 5 7 1
8 7 8 1
9 8 9 1
10 9 10 1
11 10 11 1
12 11 12 1
13 12 13 1
14 8 13 1
15 12 14 1
16 14 15 1
17 1 16 1
18 16 17 1
19 2 18 1
20 3 19 1
21 4 20 1
22 9 21 1
23 21 22 am
24 22 23 1
25 23 24 1
26 24 25 1
27 25 26 1
28 15 27 1
29 27 28 1
30 28 29 1
31 29 30 1
32 30 31 1
33 15 31 1
34 28 32 1
35 32 33 1
36 29 34 1
37 30 35 1
38 31 36 1
39 22 37 2
40 23 38 1
41 11 39 1
42 13 40 1
43 1 41 1
44 2 42 1
45 3 43 1
46 4 44 1
47 5 45 1
48 8 46 1
49 9 47 1
50 10 48 1
51 10 49 1
52 11 50 1
53 12 51 1
54 13 52 1
55 15 53 1
56 16 54 1
57 16 55 1
58 17 56 1
59 18 57 1
60 19 58 1
61 19 59 1
62 20 60 1
63 21 61 1
64 23 62 1
65 24 63 1
66 24 64 1
67 25 65 1
68 25 66 1
69 26 67 1
70 26 68 1
71 28 69 1
72 29 70 1
73 30 71 1
74 31 72 1
75 32 73 1
76 32 74 1
77 33 75 1
78 33 76 1
79 34 77 1
80 35 78 1
81 36 79 1
82 38 80 1
83 39 81 1
84 39 82 1
85 40 83 1
86 19 84 1
87 26 85 1
88 33 86 1
89 39 87 1