@COMMENT
LIGANDBOX_ID = D00865-07
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00865
NAME = Amikacin_sulfate_(JP18/USP)_Amikin_(TN)
MOLECULAR_FORMULA = C22H43N5O13
MOLECULAR_WEIGHT = 585.608
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 17
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 16
TPSA = 331.9400
HOMO = -19.7533
LUMO = -11.5616
mLOGPA = -7.086
mLOGS = 4.186
mLOGD = -3.641
@MOLECULE
D00865-07
87 89 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 3.3868 -2.7356 -1.0750 C.3 1 LGD 0.1230
2 C2 3.7025 -3.3095 -2.4851 C.3 1 LGD 0.0996
3 C3 2.4744 -3.1635 -3.4128 C.3 1 LGD 0.0909
4 C4 2.0088 -1.6876 -3.4575 C.3 1 LGD 0.1034
5 C5 1.7532 -1.1504 -2.0221 C.3 1 LGD 0.3587
6 O1 2.9470 -1.3607 -1.2263 O.3 1 LGD -0.4278
7 O2 0.6353 -1.8613 -1.4412 O.3 1 LGD -0.4508
8 C6 -0.3318 -1.0914 -0.6834 C.3 1 LGD 0.1125
9 C7 0.0780 -1.0371 0.8213 C.3 1 LGD 0.1046
10 C8 -1.0498 -0.4418 1.7065 C.3 1 LGD -0.1239
11 C9 -2.4313 -1.1035 1.4935 C.3 1 LGD 0.0870
12 C10 -2.8281 -1.1513 -0.0121 C.3 1 LGD 0.1415
13 C11 -1.7133 -1.7709 -0.9041 C.3 1 LGD 0.1458
14 O3 -3.0776 0.1955 -0.4814 O.3 1 LGD -0.4423
15 C12 -4.2722 0.8264 0.0425 C.3 1 LGD 0.2960
16 C13 4.6425 -2.7481 -0.1648 C.3 1 LGD 0.1414
17 O4 4.3365 -2.2628 1.1382 O.3 1 LGD -0.6315
18 O5 4.0702 -4.6872 -2.3979 O.3 1 LGD -0.5943
19 N1 2.8173 -3.6407 -4.7672 N.4 1 LGD -0.8167
20 O6 0.8281 -1.5629 -4.2533 O.3 1 LGD -0.5809
21 N2 1.2674 -0.1929 0.9947 N.am 1 LGD -0.6174
22 C14 2.0916 -0.2753 2.1092 C.2 1 LGD 0.6174
23 C15 3.3136 0.6532 2.2030 C.3 1 LGD 0.1073
24 C16 2.9616 2.0311 2.8186 C.3 1 LGD -0.1067
25 C17 1.9767 2.8540 1.9596 C.3 1 LGD 0.0980
26 N3 1.7809 4.1765 2.5799 N.4 1 LGD -0.8261
27 O7 -3.9378 1.6288 1.2003 O.3 1 LGD -0.4745
28 C18 -3.0151 2.7212 0.9699 C.3 1 LGD 0.1226
29 C19 -3.6588 3.7127 -0.0289 C.3 1 LGD 0.1347
30 C20 -4.0431 2.9865 -1.3419 C.3 1 LGD 0.0925
31 C21 -4.9148 1.7412 -1.0363 C.3 1 LGD 0.0933
32 C22 -2.7265 3.3922 2.3304 C.3 1 LGD 0.1025
33 N4 -2.1652 2.4013 3.2694 N.4 1 LGD -0.8268
34 O8 -2.7487 4.7754 -0.3100 O.3 1 LGD -0.6288
35 O9 -4.7611 3.8799 -2.1925 O.3 1 LGD -0.5697
36 O10 -5.1548 0.9961 -2.2304 O.3 1 LGD -0.5410
37 O11 1.8516 -1.0934 2.9807 O.2 1 LGD -0.5449
38 O12 3.8915 0.8245 0.9055 O.3 1 LGD -0.6086
39 N5 -2.4050 -2.4681 2.0527 N.4 1 LGD -0.8185
40 O13 -1.6091 -3.1746 -0.6506 O.3 1 LGD -0.6230
41 H1 2.5960 -3.3339 -0.6036 H 1 LGD 0.0875
42 H2 4.5340 -2.7359 -2.9157 H 1 LGD 0.0690
43 H3 1.6625 -3.7789 -3.0196 H 1 LGD 0.1399
44 H4 2.8093 -1.0815 -3.9012 H 1 LGD 0.0840
45 H5 1.5306 -0.0783 -2.0756 H 1 LGD 0.1029
46 H6 -0.3982 -0.0684 -1.0769 H 1 LGD 0.0703
47 H7 0.2968 -2.0591 1.1581 H 1 LGD 0.0998
48 H8 -0.7760 -0.5112 2.7667 H 1 LGD 0.0548
49 H9 -1.1329 0.6253 1.4821 H 1 LGD 0.0548
50 H10 -3.1830 -0.5347 2.0435 H 1 LGD 0.1031
51 H11 -3.7419 -1.7486 -0.1308 H 1 LGD 0.1084
52 H12 -1.9980 -1.6222 -1.9541 H 1 LGD 0.1143
53 H13 -5.0003 0.0580 0.3296 H 1 LGD 0.1243
54 H14 5.0243 -3.7738 -0.0892 H 1 LGD 0.0615
55 H15 5.4289 -2.1314 -0.6189 H 1 LGD 0.0615
56 H16 5.0499 -2.5540 1.7341 H 1 LGD 0.4539
57 H17 4.9812 -4.7346 -2.0571 H 1 LGD 0.4635
58 H18 3.5456 -3.0660 -5.1658 H 1 LGD 0.4746
59 H19 3.1462 -4.5951 -4.7050 H 1 LGD 0.4746
60 H20 1.0942 -1.2734 -5.1439 H 1 LGD 0.4412
61 H21 1.5212 0.4518 0.2608 H 1 LGD 0.3237
62 H22 4.0382 0.1552 2.8606 H 1 LGD 0.1298
63 H23 2.5357 1.8793 3.8190 H 1 LGD 0.0965
64 H24 3.8898 2.6013 2.9563 H 1 LGD 0.0965
65 H25 2.3821 2.9872 0.9545 H 1 LGD 0.0985
66 H26 1.0170 2.3383 1.8904 H 1 LGD 0.0985
67 H27 1.4154 4.0702 3.5156 H 1 LGD 0.4689
68 H28 2.6676 4.6599 2.6284 H 1 LGD 0.4689
69 H29 -2.0761 2.3465 0.5448 H 1 LGD 0.0492
70 H30 -4.5719 4.1211 0.4246 H 1 LGD 0.0963
71 H31 -3.1240 2.6562 -1.8434 H 1 LGD 0.0471
72 H32 -5.8752 2.0924 -0.6361 H 1 LGD 0.1421
73 H33 -2.0188 4.2126 2.1938 H 1 LGD 0.1398
74 H34 -3.6544 3.7944 2.7427 H 1 LGD 0.1398
75 H35 -2.8273 1.6451 3.3784 H 1 LGD 0.4573
76 H36 -2.0011 2.8317 4.1690 H 1 LGD 0.4573
77 H37 -3.0945 5.2365 -1.0963 H 1 LGD 0.4829
78 H38 -5.2113 3.3361 -2.8642 H 1 LGD 0.4624
79 H39 -4.3292 0.5276 -2.4481 H 1 LGD 0.4141
80 H40 4.0764 -0.0654 0.5510 H 1 LGD 0.4642
81 H41 -3.3298 -2.8735 2.0145 H 1 LGD 0.4778
82 H42 -2.0883 -2.4446 3.0117 H 1 LGD 0.4778
83 H43 -0.8431 -3.4948 -1.1615 H 1 LGD 0.4696
84 H44 1.9967 -3.6083 -5.3559 H 1 LGD 0.4746
85 H45 1.1401 4.7266 2.0251 H 1 LGD 0.4689
86 H46 -1.3001 2.0315 2.9037 H 1 LGD 0.4573
87 H47 -1.7777 -3.0417 1.5039 H 1 LGD 0.4778
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 5 7 1
8 7 8 1
9 8 9 1
10 9 10 1
11 10 11 1
12 11 12 1
13 12 13 1
14 8 13 1
15 12 14 1
16 14 15 1
17 1 16 1
18 16 17 1
19 2 18 1
20 3 19 1
21 4 20 1
22 9 21 1
23 21 22 am
24 22 23 1
25 23 24 1
26 24 25 1
27 25 26 1
28 15 27 1
29 27 28 1
30 28 29 1
31 29 30 1
32 30 31 1
33 15 31 1
34 28 32 1
35 32 33 1
36 29 34 1
37 30 35 1
38 31 36 1
39 22 37 2
40 23 38 1
41 11 39 1
42 13 40 1
43 1 41 1
44 2 42 1
45 3 43 1
46 4 44 1
47 5 45 1
48 8 46 1
49 9 47 1
50 10 48 1
51 10 49 1
52 11 50 1
53 12 51 1
54 13 52 1
55 15 53 1
56 16 54 1
57 16 55 1
58 17 56 1
59 18 57 1
60 19 58 1
61 19 59 1
62 20 60 1
63 21 61 1
64 23 62 1
65 24 63 1
66 24 64 1
67 25 65 1
68 25 66 1
69 26 67 1
70 26 68 1
71 28 69 1
72 29 70 1
73 30 71 1
74 31 72 1
75 32 73 1
76 32 74 1
77 33 75 1
78 33 76 1
79 34 77 1
80 35 78 1
81 36 79 1
82 38 80 1
83 39 81 1
84 39 82 1
85 40 83 1
86 19 84 1
87 26 85 1
88 33 86 1
89 39 87 1