@COMMENT
LIGANDBOX_ID = D00865-09
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00865
NAME = Amikacin_sulfate_(JP18/USP)_Amikin_(TN)
MOLECULAR_FORMULA = C22H43N5O13
MOLECULAR_WEIGHT = 585.608
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 17
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 16
TPSA = 331.9400
HOMO = -19.7533
LUMO = -11.5616
mLOGPA = -7.086
mLOGS = 4.186
mLOGD = -3.641
@MOLECULE
D00865-09
87 89 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.1775 1.7163 -2.5903 C.3 1 LGD 0.1394
2 C2 0.4681 3.1229 -2.7437 C.3 1 LGD 0.1027
3 C3 1.5789 3.3206 -1.6827 C.3 1 LGD 0.0771
4 C4 2.6078 2.1671 -1.7574 C.3 1 LGD 0.1045
5 C5 1.9028 0.7854 -1.6787 C.3 1 LGD 0.3405
6 O1 0.8724 0.7223 -2.6898 O.3 1 LGD -0.4004
7 O2 1.3131 0.6158 -0.3718 O.3 1 LGD -0.4689
8 C6 1.2379 -0.7474 0.1059 C.3 1 LGD 0.1424
9 C7 1.6163 -0.7332 1.6112 C.3 1 LGD 0.1242
10 C8 0.5409 -0.0291 2.4793 C.3 1 LGD -0.1310
11 C9 -0.8734 -0.6106 2.2563 C.3 1 LGD 0.1323
12 C10 -1.2548 -0.6201 0.7465 C.3 1 LGD 0.0976
13 C11 -0.1857 -1.3127 -0.1591 C.3 1 LGD 0.0876
14 O3 -2.5343 -1.2851 0.6245 O.3 1 LGD -0.4968
15 C12 -3.2286 -1.1150 -0.6316 C.3 1 LGD 0.3123
16 C13 -1.2163 1.4201 -3.6998 C.3 1 LGD 0.1469
17 O4 -1.7833 0.1226 -3.5260 O.3 1 LGD -0.6301
18 O5 -0.5165 4.1468 -2.5975 O.3 1 LGD -0.5921
19 N1 2.2537 4.6158 -1.9014 N.4 1 LGD -0.8197
20 O6 3.5802 2.2954 -0.7145 O.3 1 LGD -0.6318
21 N2 2.8887 -0.0169 1.7607 N.am 1 LGD -0.6247
22 C14 3.8346 -0.3297 2.7260 C.2 1 LGD 0.6212
23 C15 5.0833 0.5591 2.8546 C.3 1 LGD 0.1022
24 C16 4.7835 1.8997 3.5778 C.3 1 LGD -0.1492
25 C17 3.7965 2.8154 2.8178 C.3 1 LGD 0.0896
26 N3 3.5835 4.0502 3.5926 N.4 1 LGD -0.8194
27 O7 -2.9237 -2.2222 -1.5132 O.3 1 LGD -0.4599
28 C18 -3.2907 -3.5382 -1.0324 C.3 1 LGD 0.1182
29 C19 -4.8267 -3.5841 -0.8294 C.3 1 LGD 0.1369
30 C20 -5.2918 -2.4499 0.1174 C.3 1 LGD 0.0913
31 C21 -4.7599 -1.0805 -0.3784 C.3 1 LGD 0.0846
32 C22 -2.8341 -4.5711 -2.0860 C.3 1 LGD 0.1095
33 N4 -1.3743 -4.4806 -2.2851 N.4 1 LGD -0.8226
34 O8 -5.2057 -4.8502 -0.2921 O.3 1 LGD -0.5991
35 O9 -6.7179 -2.4228 0.1714 O.3 1 LGD -0.5634
36 O10 -5.0756 -0.0548 0.5639 O.3 1 LGD -0.5510
37 O11 3.6687 -1.3015 3.4427 O.2 1 LGD -0.5147
38 O12 5.6465 0.8006 1.5614 O.3 1 LGD -0.5405
39 N5 -0.9301 -1.9732 2.8213 N.4 1 LGD -0.8219
40 O13 -0.1860 -2.7222 0.0707 O.3 1 LGD -0.6219
41 H1 -0.6730 1.6472 -1.6133 H 1 LGD 0.0640
42 H2 0.9216 3.1894 -3.7417 H 1 LGD 0.0806
43 H3 1.1221 3.3233 -0.6908 H 1 LGD 0.1243
44 H4 3.1150 2.2199 -2.7296 H 1 LGD 0.0987
45 H5 2.6466 0.0006 -1.8610 H 1 LGD 0.1318
46 H6 1.9729 -1.3722 -0.4188 H 1 LGD 0.1059
47 H7 1.7270 -1.7721 1.9478 H 1 LGD 0.1042
48 H8 0.8105 -0.1066 3.5406 H 1 LGD 0.0872
49 H9 0.5216 1.0424 2.2404 H 1 LGD 0.0872
50 H10 -1.5961 0.0049 2.7959 H 1 LGD 0.1309
51 H11 -1.3547 0.4252 0.4255 H 1 LGD 0.1028
52 H12 -0.4407 -1.1203 -1.2091 H 1 LGD 0.1046
53 H13 -2.9229 -0.1726 -1.1017 H 1 LGD 0.1213
54 H14 -2.0103 2.1768 -3.6679 H 1 LGD 0.0664
55 H15 -0.7277 1.4872 -4.6804 H 1 LGD 0.0664
56 H16 -2.3855 -0.0346 -4.2751 H 1 LGD 0.4510
57 H17 -0.6705 4.5416 -3.4745 H 1 LGD 0.4618
58 H18 2.6907 4.6306 -2.8120 H 1 LGD 0.4700
59 H19 1.5706 5.3593 -1.8495 H 1 LGD 0.4700
60 H20 4.4177 2.5717 -1.1285 H 1 LGD 0.4506
61 H21 3.0588 0.7684 1.1491 H 1 LGD 0.3153
62 H22 5.8067 -0.0018 3.4610 H 1 LGD 0.1743
63 H23 4.3788 1.6803 4.5745 H 1 LGD 0.1034
64 H24 5.7285 2.4357 3.7359 H 1 LGD 0.1034
65 H25 4.2011 3.0711 1.8366 H 1 LGD 0.0936
66 H26 2.8385 2.3086 2.6870 H 1 LGD 0.0936
67 H27 3.2073 3.8222 4.5025 H 1 LGD 0.4700
68 H28 4.4620 4.5358 3.7105 H 1 LGD 0.4700
69 H29 -2.7890 -3.7493 -0.0795 H 1 LGD 0.0435
70 H30 -5.3101 -3.4409 -1.8050 H 1 LGD 0.0893
71 H31 -4.8878 -2.6416 1.1202 H 1 LGD 0.0407
72 H32 -5.2480 -0.8514 -1.3348 H 1 LGD 0.1399
73 H33 -3.0963 -5.5779 -1.7530 H 1 LGD 0.1485
74 H34 -3.3403 -4.3727 -3.0331 H 1 LGD 0.1485
75 H35 -1.1354 -3.5391 -2.5654 H 1 LGD 0.4643
76 H36 -1.0859 -5.1281 -3.0057 H 1 LGD 0.4643
77 H37 -6.1245 -4.7584 0.0204 H 1 LGD 0.4763
78 H38 -6.9735 -1.5800 0.5882 H 1 LGD 0.4539
79 H39 -4.4890 -0.1780 1.3315 H 1 LGD 0.4037
80 H40 4.9519 1.1756 0.9923 H 1 LGD 0.3825
81 H41 -1.8639 -2.3425 2.7087 H 1 LGD 0.4724
82 H42 -0.6930 -1.9483 3.8033 H 1 LGD 0.4724
83 H43 -1.1221 -2.9909 0.0967 H 1 LGD 0.4179
84 H44 2.9562 4.7563 -1.1893 H 1 LGD 0.4700
85 H45 2.9334 4.6528 3.1077 H 1 LGD 0.4700
86 H46 -0.8932 -4.7051 -1.4256 H 1 LGD 0.4643
87 H47 -0.2768 -2.5690 2.3321 H 1 LGD 0.4724
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 5 7 1
8 7 8 1
9 8 9 1
10 9 10 1
11 10 11 1
12 11 12 1
13 12 13 1
14 8 13 1
15 12 14 1
16 14 15 1
17 1 16 1
18 16 17 1
19 2 18 1
20 3 19 1
21 4 20 1
22 9 21 1
23 21 22 am
24 22 23 1
25 23 24 1
26 24 25 1
27 25 26 1
28 15 27 1
29 27 28 1
30 28 29 1
31 29 30 1
32 30 31 1
33 15 31 1
34 28 32 1
35 32 33 1
36 29 34 1
37 30 35 1
38 31 36 1
39 22 37 2
40 23 38 1
41 11 39 1
42 13 40 1
43 1 41 1
44 2 42 1
45 3 43 1
46 4 44 1
47 5 45 1
48 8 46 1
49 9 47 1
50 10 48 1
51 10 49 1
52 11 50 1
53 12 51 1
54 13 52 1
55 15 53 1
56 16 54 1
57 16 55 1
58 17 56 1
59 18 57 1
60 19 58 1
61 19 59 1
62 20 60 1
63 21 61 1
64 23 62 1
65 24 63 1
66 24 64 1
67 25 65 1
68 25 66 1
69 26 67 1
70 26 68 1
71 28 69 1
72 29 70 1
73 30 71 1
74 31 72 1
75 32 73 1
76 32 74 1
77 33 75 1
78 33 76 1
79 34 77 1
80 35 78 1
81 36 79 1
82 38 80 1
83 39 81 1
84 39 82 1
85 40 83 1
86 19 84 1
87 26 85 1
88 33 86 1
89 39 87 1