@COMMENT
LIGANDBOX_ID = D00865-10
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00865
NAME = Amikacin_sulfate_(JP18/USP)_Amikin_(TN)
MOLECULAR_FORMULA = C22H43N5O13
MOLECULAR_WEIGHT = 585.608
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 17
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 16
TPSA = 331.9400
HOMO = -19.7533
LUMO = -11.5616
mLOGPA = -7.086
mLOGS = 4.186
mLOGD = -3.641
@MOLECULE
D00865-10
87 89 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.6288 0.1093 -3.3053 C.3 1 LGD 0.1261
2 C2 0.0863 1.4853 -3.4070 C.3 1 LGD 0.1009
3 C3 1.1113 1.6284 -2.2576 C.3 1 LGD 0.0732
4 C4 2.0996 0.4371 -2.2770 C.3 1 LGD 0.0999
5 C5 1.3425 -0.9211 -2.2668 C.3 1 LGD 0.3414
6 O1 0.3798 -0.9300 -3.3487 O.3 1 LGD -0.3774
7 O2 0.6614 -1.0999 -1.0011 O.3 1 LGD -0.4776
8 C6 0.6132 -2.4607 -0.4983 C.3 1 LGD 0.1024
9 C7 1.0717 -2.4542 0.9847 C.3 1 LGD 0.1208
10 C8 0.0326 -1.7828 1.9175 C.3 1 LGD -0.1268
11 C9 -1.3847 -2.3912 1.7769 C.3 1 LGD 0.0831
12 C10 -1.8719 -2.4167 0.2974 C.3 1 LGD 0.1025
13 C11 -0.8154 -3.0633 -0.6488 C.3 1 LGD 0.1479
14 O3 -2.1550 -1.0659 -0.1435 O.3 1 LGD -0.4305
15 C12 -3.3097 -0.4450 0.4715 C.3 1 LGD 0.2891
16 C13 -1.6284 -0.1263 -4.4650 C.3 1 LGD 0.1468
17 O4 -2.3361 -1.3488 -4.2771 O.3 1 LGD -0.6130
18 O5 -0.8541 2.5586 -3.3438 O.3 1 LGD -0.6035
19 N1 1.8426 2.9025 -2.4047 N.4 1 LGD -0.8204
20 O6 3.0100 0.5200 -1.1765 O.3 1 LGD -0.6467
21 N2 2.3475 -1.7381 1.1016 N.am 1 LGD -0.6273
22 C14 3.2889 -2.0319 2.0794 C.2 1 LGD 0.6136
23 C15 4.5444 -1.1525 2.2002 C.3 1 LGD 0.1037
24 C16 4.2629 0.1801 2.9442 C.3 1 LGD -0.1503
25 C17 3.2677 1.1080 2.2118 C.3 1 LGD 0.0890
26 N3 3.1076 2.3528 2.9839 N.4 1 LGD -0.8261
27 O7 -2.8941 0.3378 1.6153 O.3 1 LGD -0.4725
28 C18 -1.9839 1.4279 1.3348 C.3 1 LGD 0.1232
29 C19 -2.7011 2.4461 0.4158 C.3 1 LGD 0.1326
30 C20 -3.2076 1.7558 -0.8722 C.3 1 LGD 0.0934
31 C21 -4.0311 0.4849 -0.5424 C.3 1 LGD 0.0967
32 C22 -1.5847 2.0686 2.6812 C.3 1 LGD 0.1010
33 N4 -0.9753 1.0506 3.5587 N.4 1 LGD -0.8260
34 O8 -1.8051 3.5033 0.0732 O.3 1 LGD -0.6458
35 O9 -4.0039 2.6655 -1.6299 O.3 1 LGD -0.5738
36 O10 -4.3347 -0.2353 -1.7383 O.3 1 LGD -0.5452
37 O11 3.1108 -2.9834 2.8202 O.2 1 LGD -0.5131
38 O12 5.0931 -0.8992 0.9035 O.3 1 LGD -0.5319
39 N5 -1.3756 -3.7631 2.3228 N.4 1 LGD -0.8200
40 O13 -1.2563 -3.0278 -2.0010 O.3 1 LGD -0.5154
41 H1 -1.1716 0.0466 -2.3568 H 1 LGD 0.0664
42 H2 0.6228 1.5262 -4.3642 H 1 LGD 0.0875
43 H3 0.5770 1.6338 -1.3051 H 1 LGD 0.1146
44 H4 2.6692 0.4813 -3.2145 H 1 LGD 0.1057
45 H5 2.0705 -1.7267 -2.4195 H 1 LGD 0.1405
46 H6 1.3143 -3.0953 -1.0564 H 1 LGD 0.1184
47 H7 1.2055 -3.4977 1.2980 H 1 LGD 0.1017
48 H8 0.3634 -1.8593 2.9614 H 1 LGD 0.0500
49 H9 -0.0112 -0.7141 1.6829 H 1 LGD 0.0500
50 H10 -2.0850 -1.8028 2.3721 H 1 LGD 0.1028
51 H11 -2.7926 -3.0118 0.2352 H 1 LGD 0.1033
52 H12 -0.7392 -4.1178 -0.3557 H 1 LGD 0.0909
53 H13 -4.0146 -1.2197 0.7970 H 1 LGD 0.1280
54 H14 -2.3433 0.7051 -4.5068 H 1 LGD 0.0635
55 H15 -1.0822 -0.1490 -5.4167 H 1 LGD 0.0635
56 H16 -2.8689 -1.5091 -5.0766 H 1 LGD 0.4665
57 H17 -0.9239 2.9477 -4.2341 H 1 LGD 0.4662
58 H18 2.3431 2.9155 -3.2822 H 1 LGD 0.4677
59 H19 1.1808 3.6668 -2.3913 H 1 LGD 0.4677
60 H20 3.8584 0.8448 -1.5289 H 1 LGD 0.4476
61 H21 2.5212 -0.9728 0.4656 H 1 LGD 0.3207
62 H22 5.2723 -1.7249 2.7904 H 1 LGD 0.1811
63 H23 3.8750 -0.0484 3.9456 H 1 LGD 0.1035
64 H24 5.2136 0.7092 3.0917 H 1 LGD 0.1035
65 H25 3.6461 1.3505 1.2171 H 1 LGD 0.0905
66 H26 2.2977 0.6168 2.1137 H 1 LGD 0.0905
67 H27 2.7684 2.1423 3.9120 H 1 LGD 0.4673
68 H28 4.0014 2.8190 3.0625 H 1 LGD 0.4673
69 H29 -1.0838 1.0546 0.8302 H 1 LGD 0.0463
70 H30 -3.5656 2.8552 0.9554 H 1 LGD 0.1042
71 H31 -2.3350 1.4598 -1.4593 H 1 LGD 0.0348
72 H32 -4.9699 0.8080 -0.0737 H 1 LGD 0.1406
73 H33 -0.8746 2.8798 2.5075 H 1 LGD 0.1386
74 H34 -2.4729 2.4780 3.1672 H 1 LGD 0.1386
75 H35 -1.6429 0.3052 3.7027 H 1 LGD 0.4572
76 H36 -0.7381 1.4615 4.4512 H 1 LGD 0.4572
77 H37 -2.2060 3.9686 -0.6840 H 1 LGD 0.4775
78 H38 -4.4838 2.1385 -2.2943 H 1 LGD 0.4628
79 H39 -3.5474 -0.7613 -1.9702 H 1 LGD 0.4266
80 H40 4.3831 -0.5519 0.3359 H 1 LGD 0.3843
81 H41 -2.3012 -4.1651 2.2617 H 1 LGD 0.4759
82 H42 -1.0929 -3.7412 3.2930 H 1 LGD 0.4759
83 H43 -1.0477 -2.1446 -2.3569 H 1 LGD 0.4405
84 H44 2.4956 3.0111 -1.6422 H 1 LGD 0.4677
85 H45 2.4570 2.9690 2.5173 H 1 LGD 0.4673
86 H46 -0.1476 0.6720 3.1225 H 1 LGD 0.4572
87 H47 -0.7270 -4.3415 1.8090 H 1 LGD 0.4759
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 5 7 1
8 7 8 1
9 8 9 1
10 9 10 1
11 10 11 1
12 11 12 1
13 12 13 1
14 8 13 1
15 12 14 1
16 14 15 1
17 1 16 1
18 16 17 1
19 2 18 1
20 3 19 1
21 4 20 1
22 9 21 1
23 21 22 am
24 22 23 1
25 23 24 1
26 24 25 1
27 25 26 1
28 15 27 1
29 27 28 1
30 28 29 1
31 29 30 1
32 30 31 1
33 15 31 1
34 28 32 1
35 32 33 1
36 29 34 1
37 30 35 1
38 31 36 1
39 22 37 2
40 23 38 1
41 11 39 1
42 13 40 1
43 1 41 1
44 2 42 1
45 3 43 1
46 4 44 1
47 5 45 1
48 8 46 1
49 9 47 1
50 10 48 1
51 10 49 1
52 11 50 1
53 12 51 1
54 13 52 1
55 15 53 1
56 16 54 1
57 16 55 1
58 17 56 1
59 18 57 1
60 19 58 1
61 19 59 1
62 20 60 1
63 21 61 1
64 23 62 1
65 24 63 1
66 24 64 1
67 25 65 1
68 25 66 1
69 26 67 1
70 26 68 1
71 28 69 1
72 29 70 1
73 30 71 1
74 31 72 1
75 32 73 1
76 32 74 1
77 33 75 1
78 33 76 1
79 34 77 1
80 35 78 1
81 36 79 1
82 38 80 1
83 39 81 1
84 39 82 1
85 40 83 1
86 19 84 1
87 26 85 1
88 33 86 1
89 39 87 1