@COMMENT
LIGANDBOX_ID = D00865-12
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00865
NAME = Amikacin_sulfate_(JP18/USP)_Amikin_(TN)
MOLECULAR_FORMULA = C22H43N5O13
MOLECULAR_WEIGHT = 585.608
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 17
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 16
TPSA = 331.9400
HOMO = -19.7533
LUMO = -11.5616
mLOGPA = -7.086
mLOGS = 4.186
mLOGD = -3.641
@MOLECULE
D00865-12
87 89 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.6954 0.0303 -3.0164 C.3 1 LGD 0.1220
2 C2 -0.0167 1.3980 -3.2966 C.3 1 LGD 0.0953
3 C3 1.0743 1.6609 -2.2344 C.3 1 LGD 0.0999
4 C4 2.0750 0.4848 -2.1668 C.3 1 LGD 0.0983
5 C5 1.3546 -0.8871 -2.0291 C.3 1 LGD 0.3292
6 O1 0.3299 -0.9909 -3.0447 O.3 1 LGD -0.3791
7 O2 0.7629 -1.0280 -0.7136 O.3 1 LGD -0.4811
8 C6 0.5956 -2.4049 -0.2842 C.3 1 LGD 0.1059
9 C7 1.0060 -2.5314 1.2104 C.3 1 LGD 0.1225
10 C8 -0.0519 -1.9800 2.2008 C.3 1 LGD -0.1152
11 C9 -1.4904 -2.4766 1.9219 C.3 1 LGD 0.0910
12 C10 -1.9026 -2.3035 0.4271 C.3 1 LGD 0.1478
13 C11 -0.8549 -2.8889 -0.5686 C.3 1 LGD 0.1246
14 O3 -2.0713 -0.8947 0.1477 O.3 1 LGD -0.4610
15 C12 -3.2187 -0.2799 0.7782 C.3 1 LGD 0.2815
16 C13 -1.7725 -0.3366 -4.0660 C.3 1 LGD 0.1491
17 O4 -2.4139 -1.5616 -3.7151 O.3 1 LGD -0.6180
18 O5 -0.9712 2.4595 -3.2612 O.3 1 LGD -0.6238
19 N1 1.7880 2.9133 -2.5534 N.4 1 LGD -0.8286
20 O6 3.0007 0.6808 -1.0934 O.3 1 LGD -0.6600
21 N2 2.2664 -1.8036 1.4039 N.am 1 LGD -0.6296
22 C14 3.2221 -2.1647 2.3418 C.2 1 LGD 0.6158
23 C15 4.4792 -1.2918 2.4916 C.3 1 LGD 0.1000
24 C16 4.2001 0.0306 3.2550 C.3 1 LGD -0.1467
25 C17 3.2537 1.0036 2.5145 C.3 1 LGD 0.0820
26 N3 3.1038 2.2273 3.3220 N.4 1 LGD -0.8219
27 O7 -2.7937 0.6440 1.8160 O.3 1 LGD -0.3895
28 C18 -2.1262 1.8775 1.4330 C.3 1 LGD 0.1448
29 C19 -3.0460 2.6533 0.4415 C.3 1 LGD 0.1108
30 C20 -3.4458 1.7712 -0.7650 C.3 1 LGD 0.0854
31 C21 -4.0949 0.4565 -0.2711 C.3 1 LGD 0.0860
32 C22 -0.7024 1.5598 0.9041 C.3 1 LGD 0.0608
33 N4 0.1004 2.7916 0.7920 N.4 1 LGD -0.8345
34 O8 -2.4182 3.8514 -0.0195 O.3 1 LGD -0.6719
35 O9 -4.3688 2.4779 -1.5931 O.3 1 LGD -0.5748
36 O10 -4.3786 -0.4082 -1.3728 O.3 1 LGD -0.5486
37 O11 3.0593 -3.1669 3.0158 O.2 1 LGD -0.4940
38 O12 5.0408 -1.0196 1.2040 O.3 1 LGD -0.5340
39 N5 -1.5952 -3.8949 2.3128 N.4 1 LGD -0.8179
40 O13 -0.8828 -4.3165 -0.4927 O.3 1 LGD -0.6214
41 H1 -1.1643 0.0559 -2.0273 H 1 LGD 0.0638
42 H2 0.4552 1.3595 -4.2874 H 1 LGD 0.0976
43 H3 0.5917 1.7638 -1.2645 H 1 LGD 0.0650
44 H4 2.6285 0.4625 -3.1147 H 1 LGD 0.1092
45 H5 2.0982 -1.6781 -2.1839 H 1 LGD 0.1372
46 H6 1.2842 -3.0459 -0.8506 H 1 LGD 0.0946
47 H7 1.1560 -3.5978 1.4243 H 1 LGD 0.1135
48 H8 0.2339 -2.2453 3.2270 H 1 LGD 0.0703
49 H9 -0.0467 -0.8889 2.1643 H 1 LGD 0.0703
50 H10 -2.1807 -1.9096 2.5497 H 1 LGD 0.1215
51 H11 -2.8590 -2.8154 0.2559 H 1 LGD 0.1049
52 H12 -1.1380 -2.5852 -1.5834 H 1 LGD 0.1196
53 H13 -3.8348 -1.0599 1.2419 H 1 LGD 0.1242
54 H14 -2.5198 0.4650 -4.1211 H 1 LGD 0.0635
55 H15 -1.3013 -0.4265 -5.0532 H 1 LGD 0.0635
56 H16 -2.9606 -1.8346 -4.4740 H 1 LGD 0.4679
57 H17 -1.3536 2.5483 -4.1529 H 1 LGD 0.4839
58 H18 2.2291 2.8343 -3.4591 H 1 LGD 0.4734
59 H19 1.1288 3.6796 -2.5808 H 1 LGD 0.4734
60 H20 3.8960 0.5516 -1.4563 H 1 LGD 0.4720
61 H21 2.4306 -0.9901 0.8295 H 1 LGD 0.2984
62 H22 5.1983 -1.8781 3.0788 H 1 LGD 0.1822
63 H23 3.7752 -0.2104 4.2382 H 1 LGD 0.1078
64 H24 5.1575 0.5335 3.4449 H 1 LGD 0.1078
65 H25 3.6719 1.2643 1.5402 H 1 LGD 0.0895
66 H26 2.2738 0.5436 2.3721 H 1 LGD 0.0895
67 H27 2.6985 1.9973 4.2192 H 1 LGD 0.4657
68 H28 4.0116 2.6463 3.4728 H 1 LGD 0.4657
69 H29 -2.0109 2.4915 2.3352 H 1 LGD 0.1103
70 H30 -3.9628 2.9188 0.9844 H 1 LGD 0.1284
71 H31 -2.5457 1.5291 -1.3385 H 1 LGD 0.0169
72 H32 -5.0389 0.7181 0.2249 H 1 LGD 0.1468
73 H33 -0.2020 0.8942 1.6040 H 1 LGD 0.1123
74 H34 -0.7648 1.0671 -0.0679 H 1 LGD 0.1123
75 H35 -0.3795 3.4321 0.1705 H 1 LGD 0.4580
76 H36 1.0196 2.5797 0.4328 H 1 LGD 0.4580
77 H37 -3.0156 4.2346 -0.6886 H 1 LGD 0.4974
78 H38 -4.8450 1.8128 -2.1226 H 1 LGD 0.4626
79 H39 -3.5352 -0.8010 -1.6636 H 1 LGD 0.4199
80 H40 4.3425 -0.6401 0.6434 H 1 LGD 0.3731
81 H41 -2.5548 -4.2021 2.2382 H 1 LGD 0.4782
82 H42 -1.2806 -4.0127 3.2658 H 1 LGD 0.4782
83 H43 -0.3473 -4.6650 -1.2280 H 1 LGD 0.4753
84 H44 2.4983 3.0932 -1.8579 H 1 LGD 0.4734
85 H45 2.5116 2.8922 2.8480 H 1 LGD 0.4657
86 H46 0.1710 3.2307 1.6988 H 1 LGD 0.4580
87 H47 -1.0240 -4.4569 1.6957 H 1 LGD 0.4782
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 5 7 1
8 7 8 1
9 8 9 1
10 9 10 1
11 10 11 1
12 11 12 1
13 12 13 1
14 8 13 1
15 12 14 1
16 14 15 1
17 1 16 1
18 16 17 1
19 2 18 1
20 3 19 1
21 4 20 1
22 9 21 1
23 21 22 am
24 22 23 1
25 23 24 1
26 24 25 1
27 25 26 1
28 15 27 1
29 27 28 1
30 28 29 1
31 29 30 1
32 30 31 1
33 15 31 1
34 28 32 1
35 32 33 1
36 29 34 1
37 30 35 1
38 31 36 1
39 22 37 2
40 23 38 1
41 11 39 1
42 13 40 1
43 1 41 1
44 2 42 1
45 3 43 1
46 4 44 1
47 5 45 1
48 8 46 1
49 9 47 1
50 10 48 1
51 10 49 1
52 11 50 1
53 12 51 1
54 13 52 1
55 15 53 1
56 16 54 1
57 16 55 1
58 17 56 1
59 18 57 1
60 19 58 1
61 19 59 1
62 20 60 1
63 21 61 1
64 23 62 1
65 24 63 1
66 24 64 1
67 25 65 1
68 25 66 1
69 26 67 1
70 26 68 1
71 28 69 1
72 29 70 1
73 30 71 1
74 31 72 1
75 32 73 1
76 32 74 1
77 33 75 1
78 33 76 1
79 34 77 1
80 35 78 1
81 36 79 1
82 38 80 1
83 39 81 1
84 39 82 1
85 40 83 1
86 19 84 1
87 26 85 1
88 33 86 1
89 39 87 1