@COMMENT
LIGANDBOX_ID = D00865-13
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00865
NAME = Amikacin_sulfate_(JP18/USP)_Amikin_(TN)
MOLECULAR_FORMULA = C22H43N5O13
MOLECULAR_WEIGHT = 585.608
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 17
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 16
TPSA = 331.9400
HOMO = -19.7533
LUMO = -11.5616
mLOGPA = -7.086
mLOGS = 4.186
mLOGD = -3.641
@MOLECULE
D00865-13
87 89 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.6196 0.0834 -3.2768 C.3 1 LGD 0.1235
2 C2 0.0549 1.4674 -3.4864 C.3 1 LGD 0.0990
3 C3 1.1238 1.6899 -2.3892 C.3 1 LGD 0.0929
4 C4 2.1426 0.5256 -2.3959 C.3 1 LGD 0.1010
5 C5 1.4253 -0.8496 -2.2984 C.3 1 LGD 0.3363
6 O1 0.4123 -0.9312 -3.3270 O.3 1 LGD -0.3803
7 O2 0.8132 -0.9965 -0.9966 O.3 1 LGD -0.4746
8 C6 0.6965 -2.3622 -0.5310 C.3 1 LGD 0.1442
9 C7 1.1120 -2.4004 0.9634 C.3 1 LGD 0.1260
10 C8 0.0560 -1.7383 1.8786 C.3 1 LGD -0.1247
11 C9 -1.3545 -2.3435 1.6889 C.3 1 LGD 0.0902
12 C10 -1.8118 -2.3144 0.1966 C.3 1 LGD 0.1134
13 C11 -0.7452 -2.8984 -0.7845 C.3 1 LGD 0.1229
14 O3 -2.0952 -0.9503 -0.1880 O.3 1 LGD -0.4367
15 C12 -3.2663 -0.3659 0.4314 C.3 1 LGD 0.2926
16 C13 -1.6752 -0.2500 -4.3577 C.3 1 LGD 0.1481
17 O4 -2.3107 -1.4935 -4.0637 O.3 1 LGD -0.6218
18 O5 -0.9072 2.5212 -3.4354 O.3 1 LGD -0.6103
19 N1 1.8175 2.9725 -2.6194 N.4 1 LGD -0.8198
20 O6 3.0894 0.6779 -1.3334 O.3 1 LGD -0.6514
21 N2 2.3887 -1.6922 1.1181 N.am 1 LGD -0.6285
22 C14 3.3168 -2.0040 2.1016 C.2 1 LGD 0.6138
23 C15 4.5893 -1.1490 2.2229 C.3 1 LGD 0.1025
24 C16 4.3277 0.2057 2.9336 C.3 1 LGD -0.1507
25 C17 3.3604 1.1383 2.1693 C.3 1 LGD 0.0870
26 N3 3.2233 2.4051 2.9093 N.4 1 LGD -0.8245
27 O7 -2.8709 0.3763 1.6094 O.3 1 LGD -0.4603
28 C18 -1.9773 1.4943 1.3792 C.3 1 LGD 0.1254
29 C19 -2.7066 2.5419 0.4973 C.3 1 LGD 0.1419
30 C20 -3.1548 1.8759 -0.8275 C.3 1 LGD 0.0933
31 C21 -3.9828 0.5921 -0.5622 C.3 1 LGD 0.0986
32 C22 -1.5774 2.0747 2.7528 C.3 1 LGD 0.1009
33 N4 -0.9677 1.0170 3.5818 N.4 1 LGD -0.8257
34 O8 -3.8373 3.0719 1.1949 O.3 1 LGD -0.5904
35 O9 -3.8983 2.8008 -1.6209 O.3 1 LGD -0.5727
36 O10 -4.2556 -0.0884 -1.7885 O.3 1 LGD -0.5528
37 O11 3.1149 -2.9501 2.8432 O.2 1 LGD -0.5115
38 O12 5.1598 -0.9345 0.9283 O.3 1 LGD -0.5297
39 N5 -1.3511 -3.7327 2.1857 N.4 1 LGD -0.8205
40 O13 -0.7263 -4.3216 -0.6511 O.3 1 LGD -0.6145
41 H1 -1.1073 0.0648 -2.2969 H 1 LGD 0.0674
42 H2 0.5498 1.4710 -4.4666 H 1 LGD 0.0870
43 H3 0.6298 1.7241 -1.4158 H 1 LGD 0.1061
44 H4 2.6761 0.5464 -3.3552 H 1 LGD 0.1039
45 H5 2.1686 -1.6406 -2.4539 H 1 LGD 0.1353
46 H6 1.4023 -3.0010 -1.0788 H 1 LGD 0.1180
47 H7 1.2327 -3.4513 1.2572 H 1 LGD 0.1136
48 H8 0.3596 -1.8321 2.9292 H 1 LGD 0.0482
49 H9 0.0198 -0.6660 1.6576 H 1 LGD 0.0482
50 H10 -2.0659 -1.7778 2.2929 H 1 LGD 0.0991
51 H11 -2.7314 -2.9056 0.0930 H 1 LGD 0.0887
52 H12 -1.0358 -2.6418 -1.8113 H 1 LGD 0.1290
53 H13 -3.9672 -1.1589 0.7188 H 1 LGD 0.1255
54 H14 -2.4283 0.5471 -4.3937 H 1 LGD 0.0629
55 H15 -1.1869 -0.2978 -5.3395 H 1 LGD 0.0629
56 H16 -2.8470 -1.7389 -4.8391 H 1 LGD 0.4629
57 H17 -1.2081 2.6967 -4.3451 H 1 LGD 0.4730
58 H18 2.2821 2.9586 -3.5162 H 1 LGD 0.4697
59 H19 1.1397 3.7228 -2.6109 H 1 LGD 0.4697
60 H20 3.9720 0.7495 -1.7403 H 1 LGD 0.4579
61 H21 2.5821 -0.9275 0.4874 H 1 LGD 0.3154
62 H22 5.2969 -1.7244 2.8343 H 1 LGD 0.1808
63 H23 3.9243 0.0084 3.9354 H 1 LGD 0.1027
64 H24 5.2877 0.7181 3.0797 H 1 LGD 0.1027
65 H25 3.7513 1.3470 1.1716 H 1 LGD 0.0927
66 H26 2.3798 0.6677 2.0760 H 1 LGD 0.0927
67 H27 2.8726 2.2252 3.8396 H 1 LGD 0.4667
68 H28 4.1265 2.8535 2.9827 H 1 LGD 0.4667
69 H29 -1.0717 1.1565 0.8596 H 1 LGD 0.0391
70 H30 -2.0069 3.3537 0.2602 H 1 LGD 0.0517
71 H31 -2.2490 1.5888 -1.3701 H 1 LGD 0.0265
72 H32 -4.9333 0.8908 -0.1011 H 1 LGD 0.1478
73 H33 -0.8692 2.8948 2.6187 H 1 LGD 0.1397
74 H34 -2.4675 2.4577 3.2571 H 1 LGD 0.1397
75 H35 -1.6360 0.2658 3.6886 H 1 LGD 0.4578
76 H36 -0.7321 1.3846 4.4933 H 1 LGD 0.4578
77 H37 -4.3399 3.6044 0.5517 H 1 LGD 0.4768
78 H38 -4.3871 2.2787 -2.2826 H 1 LGD 0.4593
79 H39 -3.4569 -0.5943 -2.0260 H 1 LGD 0.4219
80 H40 4.4787 -0.5380 0.3580 H 1 LGD 0.3812
81 H41 -2.2879 -4.1104 2.1612 H 1 LGD 0.4787
82 H42 -1.0061 -3.7592 3.1350 H 1 LGD 0.4787
83 H43 -1.4394 -4.6817 -1.2088 H 1 LGD 0.4689
84 H44 2.5000 3.1242 -1.8904 H 1 LGD 0.4697
85 H45 2.5894 3.0234 2.4229 H 1 LGD 0.4667
86 H46 -0.1396 0.6586 3.1296 H 1 LGD 0.4578
87 H47 -0.7548 -4.2990 1.5966 H 1 LGD 0.4787
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 5 7 1
8 7 8 1
9 8 9 1
10 9 10 1
11 10 11 1
12 11 12 1
13 12 13 1
14 8 13 1
15 12 14 1
16 14 15 1
17 1 16 1
18 16 17 1
19 2 18 1
20 3 19 1
21 4 20 1
22 9 21 1
23 21 22 am
24 22 23 1
25 23 24 1
26 24 25 1
27 25 26 1
28 15 27 1
29 27 28 1
30 28 29 1
31 29 30 1
32 30 31 1
33 15 31 1
34 28 32 1
35 32 33 1
36 29 34 1
37 30 35 1
38 31 36 1
39 22 37 2
40 23 38 1
41 11 39 1
42 13 40 1
43 1 41 1
44 2 42 1
45 3 43 1
46 4 44 1
47 5 45 1
48 8 46 1
49 9 47 1
50 10 48 1
51 10 49 1
52 11 50 1
53 12 51 1
54 13 52 1
55 15 53 1
56 16 54 1
57 16 55 1
58 17 56 1
59 18 57 1
60 19 58 1
61 19 59 1
62 20 60 1
63 21 61 1
64 23 62 1
65 24 63 1
66 24 64 1
67 25 65 1
68 25 66 1
69 26 67 1
70 26 68 1
71 28 69 1
72 29 70 1
73 30 71 1
74 31 72 1
75 32 73 1
76 32 74 1
77 33 75 1
78 33 76 1
79 34 77 1
80 35 78 1
81 36 79 1
82 38 80 1
83 39 81 1
84 39 82 1
85 40 83 1
86 19 84 1
87 26 85 1
88 33 86 1
89 39 87 1