@COMMENT
LIGANDBOX_ID = D00865-15
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00865
NAME = Amikacin_sulfate_(JP18/USP)_Amikin_(TN)
MOLECULAR_FORMULA = C22H43N5O13
MOLECULAR_WEIGHT = 585.608
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 17
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 16
TPSA = 331.9400
HOMO = -19.7533
LUMO = -11.5616
mLOGPA = -7.086
mLOGS = 4.186
mLOGD = -3.641
@MOLECULE
D00865-15
87 89 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.5783 0.0029 -3.3278 C.3 1 LGD 0.1216
2 C2 0.0724 1.4042 -3.5088 C.3 1 LGD 0.0996
3 C3 1.1011 1.6444 -2.3777 C.3 1 LGD 0.0961
4 C4 2.1474 0.5048 -2.3677 C.3 1 LGD 0.1008
5 C5 1.4552 -0.8830 -2.2844 C.3 1 LGD 0.3347
6 O1 0.4775 -0.9882 -3.3454 O.3 1 LGD -0.3797
7 O2 0.8042 -1.0297 -1.0011 O.3 1 LGD -0.4745
8 C6 0.6821 -2.3929 -0.5315 C.3 1 LGD 0.1426
9 C7 1.0919 -2.4270 0.9650 C.3 1 LGD 0.1255
10 C8 0.0347 -1.7593 1.8761 C.3 1 LGD -0.1241
11 C9 -1.3783 -2.3574 1.6805 C.3 1 LGD 0.0902
12 C10 -1.8285 -2.3344 0.1861 C.3 1 LGD 0.1140
13 C11 -0.7602 -2.9238 -0.7894 C.3 1 LGD 0.1244
14 O3 -2.1078 -0.9725 -0.2057 O.3 1 LGD -0.4165
15 C12 -3.2851 -0.3862 0.3957 C.3 1 LGD 0.2877
16 C13 -1.5897 -0.3457 -4.4457 C.3 1 LGD 0.1504
17 O4 -2.1882 -1.6171 -4.1980 O.3 1 LGD -0.6153
18 O5 -0.9106 2.4396 -3.4874 O.3 1 LGD -0.6130
19 N1 1.7678 2.9464 -2.5741 N.4 1 LGD -0.8174
20 O6 3.0705 0.6749 -1.2876 O.3 1 LGD -0.6537
21 N2 2.3703 -1.7221 1.1223 N.am 1 LGD -0.6280
22 C14 3.2945 -2.0345 2.1092 C.2 1 LGD 0.6143
23 C15 4.5693 -1.1828 2.2324 C.3 1 LGD 0.1025
24 C16 4.3088 0.1769 2.9343 C.3 1 LGD -0.1510
25 C17 3.3497 1.1088 2.1591 C.3 1 LGD 0.0871
26 N3 3.2121 2.3808 2.8898 N.4 1 LGD -0.8244
27 O7 -2.9052 0.3934 1.5559 O.3 1 LGD -0.4825
28 C18 -1.9811 1.4809 1.3042 C.3 1 LGD 0.1195
29 C19 -2.6546 2.5009 0.3502 C.3 1 LGD 0.1058
30 C20 -3.1242 1.7867 -0.9413 C.3 1 LGD 0.0891
31 C21 -3.9967 0.5441 -0.6219 C.3 1 LGD 0.0978
32 C22 -1.6189 2.1161 2.6625 C.3 1 LGD 0.1024
33 N4 -1.0294 1.0901 3.5449 N.4 1 LGD -0.8254
34 O8 -1.7281 3.5341 0.0178 O.3 1 LGD -0.6393
35 O9 -3.8346 2.6840 -1.7946 O.3 1 LGD -0.5691
36 O10 -5.2484 0.9619 -0.0707 O.3 1 LGD -0.5398
37 O11 3.0881 -2.9787 2.8518 O.2 1 LGD -0.5126
38 O12 5.1466 -0.9772 0.9395 O.3 1 LGD -0.5296
39 N5 -1.3834 -3.7451 2.1816 N.4 1 LGD -0.8201
40 O13 -0.7476 -4.3468 -0.6542 O.3 1 LGD -0.6173
41 H1 -1.0988 -0.0364 -2.3660 H 1 LGD 0.0705
42 H2 0.5990 1.4224 -4.4721 H 1 LGD 0.0847
43 H3 0.5778 1.6562 -1.4191 H 1 LGD 0.1133
44 H4 2.6978 0.5393 -3.3170 H 1 LGD 0.1038
45 H5 2.2171 -1.6616 -2.4097 H 1 LGD 0.1335
46 H6 1.3872 -3.0357 -1.0755 H 1 LGD 0.1179
47 H7 1.2084 -3.4773 1.2622 H 1 LGD 0.1128
48 H8 0.3335 -1.8563 2.9277 H 1 LGD 0.0489
49 H9 0.0050 -0.6862 1.6586 H 1 LGD 0.0489
50 H10 -2.0899 -1.7855 2.2784 H 1 LGD 0.0945
51 H11 -2.7486 -2.9244 0.0808 H 1 LGD 0.0880
52 H12 -1.0459 -2.6662 -1.8176 H 1 LGD 0.1317
53 H13 -3.9811 -1.1785 0.6973 H 1 LGD 0.1262
54 H14 -2.3699 0.4250 -4.4846 H 1 LGD 0.0595
55 H15 -1.0737 -0.3533 -5.4143 H 1 LGD 0.0595
56 H16 -2.7599 -1.8257 -4.9583 H 1 LGD 0.4576
57 H17 -1.2806 2.5216 -4.3846 H 1 LGD 0.4751
58 H18 2.2540 2.9565 -3.4592 H 1 LGD 0.4693
59 H19 1.0704 3.6785 -2.5718 H 1 LGD 0.4693
60 H20 3.9623 0.7294 -1.6765 H 1 LGD 0.4575
61 H21 2.5667 -0.9578 0.4922 H 1 LGD 0.3158
62 H22 5.2720 -1.7574 2.8503 H 1 LGD 0.1803
63 H23 3.8989 -0.0135 3.9348 H 1 LGD 0.1021
64 H24 5.2700 0.6863 3.0831 H 1 LGD 0.1021
65 H25 3.7477 1.3104 1.1628 H 1 LGD 0.0937
66 H26 2.3679 0.6414 2.0622 H 1 LGD 0.0937
67 H27 2.8566 2.2080 3.8196 H 1 LGD 0.4668
68 H28 4.1158 2.8279 2.9639 H 1 LGD 0.4668
69 H29 -1.0658 1.1005 0.8335 H 1 LGD 0.0512
70 H30 -3.5273 2.9362 0.8545 H 1 LGD 0.0934
71 H31 -2.2285 1.4391 -1.4622 H 1 LGD 0.0666
72 H32 -4.1704 -0.0163 -1.5498 H 1 LGD 0.1384
73 H33 -0.9044 2.9280 2.5115 H 1 LGD 0.1384
74 H34 -2.5191 2.5213 3.1295 H 1 LGD 0.1384
75 H35 -1.6997 0.3435 3.6693 H 1 LGD 0.4583
76 H36 -0.8092 1.4932 4.4453 H 1 LGD 0.4583
77 H37 -2.0741 3.9659 -0.7851 H 1 LGD 0.4742
78 H38 -4.7730 2.4222 -1.7642 H 1 LGD 0.4613
79 H39 -5.0963 1.1851 0.8651 H 1 LGD 0.4214
80 H40 4.4717 -0.5738 0.3667 H 1 LGD 0.3810
81 H41 -2.3225 -4.1172 2.1586 H 1 LGD 0.4788
82 H42 -1.0374 -3.7711 3.1306 H 1 LGD 0.4788
83 H43 -1.3961 -4.7097 -1.2841 H 1 LGD 0.4717
84 H44 2.4274 3.1048 -1.8258 H 1 LGD 0.4693
85 H45 2.5814 2.9966 2.3960 H 1 LGD 0.4668
86 H46 -0.1930 0.7139 3.1231 H 1 LGD 0.4583
87 H47 -0.7913 -4.3166 1.5933 H 1 LGD 0.4788
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 5 7 1
8 7 8 1
9 8 9 1
10 9 10 1
11 10 11 1
12 11 12 1
13 12 13 1
14 8 13 1
15 12 14 1
16 14 15 1
17 1 16 1
18 16 17 1
19 2 18 1
20 3 19 1
21 4 20 1
22 9 21 1
23 21 22 am
24 22 23 1
25 23 24 1
26 24 25 1
27 25 26 1
28 15 27 1
29 27 28 1
30 28 29 1
31 29 30 1
32 30 31 1
33 15 31 1
34 28 32 1
35 32 33 1
36 29 34 1
37 30 35 1
38 31 36 1
39 22 37 2
40 23 38 1
41 11 39 1
42 13 40 1
43 1 41 1
44 2 42 1
45 3 43 1
46 4 44 1
47 5 45 1
48 8 46 1
49 9 47 1
50 10 48 1
51 10 49 1
52 11 50 1
53 12 51 1
54 13 52 1
55 15 53 1
56 16 54 1
57 16 55 1
58 17 56 1
59 18 57 1
60 19 58 1
61 19 59 1
62 20 60 1
63 21 61 1
64 23 62 1
65 24 63 1
66 24 64 1
67 25 65 1
68 25 66 1
69 26 67 1
70 26 68 1
71 28 69 1
72 29 70 1
73 30 71 1
74 31 72 1
75 32 73 1
76 32 74 1
77 33 75 1
78 33 76 1
79 34 77 1
80 35 78 1
81 36 79 1
82 38 80 1
83 39 81 1
84 39 82 1
85 40 83 1
86 19 84 1
87 26 85 1
88 33 86 1
89 39 87 1