@COMMENT
LIGANDBOX_ID = D00926-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00926
NAME = Vancomycin_hydrochloride_(JP18/USP)_Vancoled_(TN)_Vancocin_(TN)
MOLECULAR_FORMULA = C66H75N9O24Cl2
MOLECULAR_WEIGHT = 1449.271
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 21
NUM_OF_ACCEPTOR = 24
NUM_OF_CHIRAL_ATOMS = 18
TPSA = 530.4900
HOMO = -6.5613
LUMO = -5.4826
mLOGS = -1.290
mLOGD = -1.898
mLOGPA = -8.186
@MOLECULE
D00926-01
177 186 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 39.7050 -27.9590 0.0200 C.3 1 LGD 0.3464
2 C2 40.7690 -28.5840 0.9500 C.3 1 LGD -0.1349
3 O1 40.3580 -27.5670 -1.2060 O.3 1 LGD -0.4278
4 C3 41.9550 -27.6130 1.2230 C.3 1 LGD 0.0938
5 C4 41.3590 -26.5310 -1.1010 C.3 1 LGD 0.1567
6 C5 42.4840 -27.0090 -0.1270 C.3 1 LGD 0.0861
7 C6 43.0910 -28.3680 1.9650 C.3 1 LGD -0.1380
8 N1 41.4900 -26.5440 2.1290 N.4 1 LGD -0.8179
9 C7 40.6790 -25.1740 -0.7660 C.3 1 LGD -0.1248
10 O2 43.4310 -25.9600 0.1000 O.3 1 LGD -0.6109
11 C8 36.6620 -29.0720 -4.0000 C.ar 1 LGD 0.0889
12 C9 35.8740 -28.0810 -4.6120 C.ar 1 LGD 0.1483
13 C10 37.9140 -29.4070 -4.5680 C.ar 1 LGD 0.0967
14 O3 36.1770 -29.6740 -2.8500 O.3 1 LGD -0.3470
15 C11 36.3610 -27.3630 -5.7190 C.ar 1 LGD -0.1663
16 O4 34.6000 -27.8330 -4.1420 O.3 1 LGD -0.2619
17 C12 38.3680 -28.7110 -5.7080 C.ar 1 LGD -0.1890
18 O5 38.6620 -30.4480 -4.0440 O.3 1 LGD -0.2660
19 C13 37.0020 -29.9210 -1.6890 C.3 1 LGD 0.3704
20 C14 37.6040 -27.6820 -6.3010 C.ar 1 LGD -0.0582
21 C15 33.5440 -27.6910 -5.0170 C.ar 1 LGD 0.0804
22 C16 39.9880 -30.6590 -4.3470 C.ar 1 LGD 0.1453
23 C17 37.6640 -28.5990 -1.1900 C.3 1 LGD 0.0323
24 O6 36.2070 -30.5170 -0.6300 O.3 1 LGD -0.3905
25 C18 38.0910 -26.9170 -7.5620 C.3 1 LGD 0.1005
26 C19 33.1540 -28.7460 -5.8700 C.ar 1 LGD -0.0039
27 C20 32.9010 -26.4490 -5.1110 C.ar 1 LGD -0.1213
28 C21 40.3640 -31.3300 -5.5250 C.ar 1 LGD 0.0206
29 C22 40.9710 -30.1580 -3.4840 C.ar 1 LGD -0.1394
30 C23 36.6490 -27.6560 -0.4710 C.3 1 LGD 0.0994
31 C24 35.1730 -29.7320 0.0250 C.3 1 LGD 0.1103
32 C25 36.9980 -26.7630 -8.6390 C.2 1 LGD 0.6567
33 N2 39.2450 -27.5670 -8.2050 N.am 1 LGD -0.5695
34 C26 32.1660 -28.5320 -6.8440 C.ar 1 LGD -0.1147
35 Cl1 33.9170 -30.3260 -5.7790 Cl 1 LGD -0.1018
36 C27 31.9200 -26.2350 -6.0930 C.ar 1 LGD -0.0745
37 C28 41.7210 -31.4250 -5.8730 C.ar 1 LGD -0.0790
38 Cl2 39.1500 -31.9990 -6.6030 Cl 1 LGD -0.0244
39 C29 42.3270 -30.2680 -3.8220 C.ar 1 LGD -0.1610
40 C30 35.7990 -28.4180 0.5860 C.3 1 LGD 0.0964
41 O7 35.8020 -27.0150 -1.4270 O.3 1 LGD -0.5783
42 N3 35.9180 -27.6340 -8.6240 N.am 1 LGD -0.5764
43 O8 37.0710 -25.9030 -9.5010 O.2 1 LGD -0.5175
44 C31 40.5520 -27.3980 -7.7670 C.2 1 LGD 0.6577
45 C32 31.5630 -27.2680 -6.9880 C.ar 1 LGD -0.0545
46 C33 42.7150 -30.8700 -5.0360 C.ar 1 LGD -0.1456
47 O9 36.6300 -28.7400 1.7030 O.3 1 LGD -0.6019
48 C34 34.6350 -27.3740 -9.2970 C.3 1 LGD 0.1403
49 C35 41.6820 -28.2850 -8.3430 C.3 1 LGD 0.0704
50 O10 40.7720 -26.5850 -6.8840 O.2 1 LGD -0.6492
51 C36 30.6800 -26.9980 -8.2190 C.3 1 LGD 0.1947
52 C37 44.1960 -30.8620 -5.4440 C.3 1 LGD 0.1987
53 C38 34.7490 -27.5400 -10.8170 C.ar 1 LGD -0.1796
54 C39 33.9380 -26.0490 -8.8580 C.2 1 LGD 0.6524
55 N4 42.5290 -28.7170 -7.2200 N.am 1 LGD -0.5970
56 C40 31.5980 -26.8080 -9.4700 C.3 1 LGD -0.0061
57 O11 29.8390 -25.8590 -8.0160 O.3 1 LGD -0.6205
58 C41 44.6410 -29.5190 -6.1010 C.3 1 LGD 0.0669
59 O12 44.5020 -31.9520 -6.3150 O.3 1 LGD -0.5669
60 C42 34.5040 -26.4670 -11.6970 C.ar 1 LGD -0.0573
61 C43 34.9630 -28.8220 -11.3540 C.ar 1 LGD -0.0773
62 N5 32.6080 -25.7790 -9.1590 N.am 1 LGD -0.5795
63 C44 43.8370 -29.1610 -7.3670 C.2 1 LGD 0.6504
64 C45 30.8830 -26.4450 -10.7890 C.2 1 LGD 0.6566
65 N6 44.5030 -28.4300 -5.1220 N.am 1 LGD -0.6053
66 C46 34.2980 -26.6880 -13.0790 C.ar 1 LGD -0.0975
67 C47 34.8820 -29.0360 -12.7390 C.ar 1 LGD -0.1708
68 O13 44.3330 -29.2150 -8.4800 O.2 1 LGD -0.5345
69 N7 31.6550 -26.4940 -11.9370 N.am 1 LGD -0.5496
70 O14 29.7030 -26.1430 -10.8650 O.2 1 LGD -0.5800
71 C48 45.1400 -27.2080 -5.2670 C.2 1 LGD 0.6303
72 C49 33.7750 -25.5730 -13.9300 C.ar 1 LGD -0.1338
73 C50 34.5230 -27.9860 -13.5980 C.ar 1 LGD 0.2061
74 C51 31.2450 -25.9880 -13.2530 C.3 1 LGD 0.0470
75 C52 44.6830 -26.0410 -4.3790 C.3 1 LGD 0.0339
76 O15 46.0350 -27.0820 -6.0850 O.2 1 LGD -0.4777
77 C53 32.3790 -25.2280 -13.9910 C.ar 1 LGD 0.0542
78 C54 34.6990 -24.8100 -14.6930 C.ar 1 LGD 0.1742
79 C55 30.6830 -27.1420 -14.0990 C.2 1 LGD 0.8846
80 C56 43.2250 -25.6380 -4.7410 C.3 1 LGD -0.1093
81 N8 44.7620 -26.4090 -2.9480 N.4 1 LGD -0.7371
82 C57 31.9760 -24.1520 -14.8070 C.ar 1 LGD -0.1871
83 C58 34.2660 -23.7430 -15.4940 C.ar 1 LGD -0.3437
84 O16 36.0340 -25.1030 -14.6580 O.3 1 LGD -0.5001
85 C59 32.9070 -23.4150 -15.5500 C.ar 1 LGD 0.1817
86 O17 32.4820 -22.3800 -16.3320 O.3 1 LGD -0.4936
87 O18 34.5200 -25.1740 -8.2430 O.2 1 LGD -0.6137
88 O19 34.3670 -28.2470 -14.9300 O.3 1 LGD -0.4749
89 O20 29.5340 -27.6650 -13.6130 O.co2 1 LGD -0.8068
90 O21 31.1940 -27.5500 -15.1270 O.co2 1 LGD -0.8068
91 C60 46.1050 -26.7040 -2.4260 C.3 1 LGD 0.0703
92 C61 42.7090 -24.3490 -4.0360 C.3 1 LGD -0.0657
93 C62 41.1970 -24.1580 -4.3110 C.3 1 LGD -0.0969
94 C63 43.4980 -23.0880 -4.4700 C.3 1 LGD -0.0969
95 C64 41.1670 -29.5470 -9.0960 C.3 1 LGD -0.1833
96 C65 40.5100 -29.2090 -10.4370 C.2 1 LGD 0.6506
97 N9 41.2820 -28.7110 -11.4650 N.am 1 LGD -0.6817
98 O22 39.3210 -29.3720 -10.6390 O.2 1 LGD -0.5783
99 C66 33.9360 -29.5510 -0.8990 C.3 1 LGD 0.1187
100 O23 32.8580 -28.9590 -0.1750 O.3 1 LGD -0.6106
101 O24 38.7300 -28.9770 -0.2850 O.3 1 LGD -0.3901
102 H1 39.2250 -27.1000 0.5010 H 1 LGD 0.0448
103 H2 40.2990 -28.8810 1.8970 H 1 LGD 0.1121
104 H3 41.1480 -29.5030 0.4840 H 1 LGD 0.1121
105 H4 41.8220 -26.4160 -2.0880 H 1 LGD 0.0871
106 H5 42.9970 -27.8260 -0.6520 H 1 LGD 0.0619
107 H6 43.5020 -29.1710 1.3400 H 1 LGD 0.0827
108 H7 43.9150 -27.6920 2.2290 H 1 LGD 0.0827
109 H8 42.7200 -28.8220 2.8930 H 1 LGD 0.0827
110 H9 42.2690 -25.9390 2.3480 H 1 LGD 0.4643
111 H10 40.7010 -26.0730 1.7130 H 1 LGD 0.4643
112 H11 41.4080 -24.3560 -0.8070 H 1 LGD 0.0639
113 H12 39.8930 -24.9530 -1.5000 H 1 LGD 0.0639
114 H13 40.2190 -25.1650 0.2270 H 1 LGD 0.0639
115 H14 44.0800 -26.2860 0.7470 H 1 LGD 0.4247
116 H15 35.7540 -26.5690 -6.1440 H 1 LGD 0.1901
117 H16 39.3230 -28.9820 -6.1370 H 1 LGD 0.1346
118 H17 37.7910 -30.6330 -1.9500 H 1 LGD 0.1114
119 H18 38.0920 -28.0710 -2.0510 H 1 LGD 0.0794
120 H19 38.3680 -25.8990 -7.2580 H 1 LGD 0.1112
121 H20 33.2010 -25.6330 -4.4600 H 1 LGD 0.1527
122 H21 40.6790 -29.6670 -2.5620 H 1 LGD 0.1486
123 H22 37.2050 -26.8710 0.0550 H 1 LGD 0.0531
124 H23 34.8170 -30.3090 0.8880 H 1 LGD 0.1163
125 H24 39.0690 -28.1980 -8.9760 H 1 LGD 0.3616
126 H25 31.9100 -29.3350 -7.5300 H 1 LGD 0.1631
127 H26 31.4880 -25.2430 -6.1910 H 1 LGD 0.1723
128 H27 41.9920 -31.9000 -6.8120 H 1 LGD 0.1818
129 H28 43.0750 -29.8540 -3.1520 H 1 LGD 0.0928
130 H29 34.9910 -27.7590 0.9260 H 1 LGD 0.1285
131 H30 35.5510 -27.6750 -2.1020 H 1 LGD 0.4410
132 H31 35.9580 -28.4120 -7.9810 H 1 LGD 0.3091
133 H32 37.3680 -29.2740 1.3530 H 1 LGD 0.4021
134 H33 33.9730 -28.1740 -8.9500 H 1 LGD 0.0599
135 H34 42.2720 -27.6650 -9.0300 H 1 LGD 0.1031
136 H35 30.0470 -27.8780 -8.3920 H 1 LGD 0.0712
137 H36 44.7900 -30.9820 -4.5290 H 1 LGD 0.0383
138 H37 42.1570 -28.6370 -6.2840 H 1 LGD 0.3063
139 H38 32.0830 -27.7690 -9.6660 H 1 LGD 0.0775
140 H39 29.3620 -25.7000 -8.8520 H 1 LGD 0.4616
141 H40 45.6950 -29.6110 -6.3930 H 1 LGD 0.1373
142 H41 44.3050 -32.7770 -5.8370 H 1 LGD 0.4337
143 H42 34.3440 -25.4640 -11.3110 H 1 LGD 0.1473
144 H43 35.1650 -29.6610 -10.6950 H 1 LGD 0.1202
145 H44 32.2700 -24.8530 -8.9370 H 1 LGD 0.3382
146 H45 43.8180 -28.5200 -4.3860 H 1 LGD 0.2940
147 H46 35.0460 -30.0320 -13.1410 H 1 LGD 0.1495
148 H47 32.5870 -26.8660 -11.8510 H 1 LGD 0.3119
149 H48 30.4170 -25.2830 -13.1070 H 1 LGD 0.0894
150 H49 45.3550 -25.1980 -4.5790 H 1 LGD 0.1503
151 H50 43.1600 -25.4950 -5.8280 H 1 LGD 0.1008
152 H51 42.5540 -26.4740 -4.5020 H 1 LGD 0.1008
153 H52 44.3620 -25.6610 -2.3970 H 1 LGD 0.4454
154 H53 30.9240 -23.8870 -14.8740 H 1 LGD 0.1614
155 H54 34.9860 -23.1700 -16.0710 H 1 LGD 0.1205
156 H55 36.5130 -24.4790 -15.2300 H 1 LGD 0.4173
157 H56 33.2480 -21.9860 -16.7840 H 1 LGD 0.4179
158 H57 34.1140 -27.4240 -15.3820 H 1 LGD 0.4574
159 H58 46.5510 -27.5490 -2.9650 H 1 LGD 0.1081
160 H59 46.7550 -25.8270 -2.5370 H 1 LGD 0.1081
161 H60 46.0390 -26.9620 -1.3620 H 1 LGD 0.1081
162 H61 42.8340 -24.4640 -2.9520 H 1 LGD -0.0088
163 H62 41.0090 -24.0030 -5.3810 H 1 LGD 0.0558
164 H63 40.6260 -25.0390 -3.9900 H 1 LGD 0.0558
165 H64 40.8080 -23.2890 -3.7650 H 1 LGD 0.0558
166 H65 44.5470 -23.1470 -4.1540 H 1 LGD 0.0558
167 H66 43.4730 -22.9630 -5.5600 H 1 LGD 0.0558
168 H67 43.0680 -22.1870 -4.0150 H 1 LGD 0.0558
169 H68 42.0030 -30.2260 -9.3050 H 1 LGD 0.0850
170 H69 40.4570 -30.1020 -8.4710 H 1 LGD 0.0850
171 H70 42.2760 -28.5820 -11.3390 H 1 LGD 0.3292
172 H71 40.8490 -28.4880 -12.3490 H 1 LGD 0.3292
173 H72 34.1770 -28.9230 -1.7610 H 1 LGD 0.0494
174 H73 33.6340 -30.5340 -1.2790 H 1 LGD 0.0494
175 H74 32.1190 -28.8340 -0.7970 H 1 LGD 0.4280
176 H75 41.2619 -26.9454 3.0161 H 1 LGD 0.4643
177 H76 44.2904 -27.2799 -2.8093 H 1 LGD 0.4454
@BOND
1 1 2 1
2 1 3 1
3 2 4 1
4 3 5 1
5 4 6 1
6 4 7 1
7 4 8 1
8 5 9 1
9 6 10 1
10 5 6 1
11 11 12 ar
12 11 13 ar
13 11 14 1
14 12 15 ar
15 12 16 1
16 13 17 ar
17 13 18 1
18 14 19 1
19 15 20 ar
20 16 21 1
21 18 22 1
22 19 23 1
23 19 24 1
24 20 25 1
25 21 26 ar
26 21 27 ar
27 22 28 ar
28 22 29 ar
29 23 30 1
30 24 31 1
31 25 32 1
32 25 33 1
33 26 34 ar
34 26 35 1
35 27 36 ar
36 28 37 ar
37 28 38 1
38 29 39 ar
39 30 40 1
40 30 41 1
41 32 42 am
42 32 43 2
43 33 44 am
44 34 45 ar
45 37 46 ar
46 40 47 1
47 42 48 1
48 44 49 1
49 44 50 2
50 45 51 1
51 46 52 1
52 48 53 1
53 48 54 1
54 49 55 1
55 51 56 1
56 51 57 1
57 52 58 1
58 52 59 1
59 53 60 ar
60 53 61 ar
61 54 62 am
62 55 63 am
63 56 64 1
64 58 65 1
65 60 66 ar
66 61 67 ar
67 63 68 2
68 64 69 am
69 64 70 2
70 65 71 am
71 66 72 1
72 66 73 ar
73 69 74 1
74 71 75 1
75 71 76 2
76 72 77 ar
77 72 78 ar
78 74 79 1
79 75 80 1
80 75 81 1
81 77 82 ar
82 78 83 ar
83 78 84 1
84 82 85 ar
85 85 86 1
86 17 20 ar
87 31 40 1
88 36 45 ar
89 39 46 ar
90 56 62 1
91 58 63 1
92 67 73 ar
93 74 77 1
94 83 85 ar
95 54 87 2
96 73 88 1
97 79 89 1
98 79 90 2
99 81 91 1
100 80 92 1
101 92 93 1
102 92 94 1
103 49 95 1
104 95 96 1
105 96 97 am
106 96 98 2
107 31 99 1
108 99 100 1
109 23 101 1
110 1 101 1
111 1 102 1
112 2 103 1
113 2 104 1
114 5 105 1
115 6 106 1
116 7 107 1
117 7 108 1
118 7 109 1
119 8 110 1
120 8 111 1
121 9 112 1
122 9 113 1
123 9 114 1
124 10 115 1
125 15 116 1
126 17 117 1
127 19 118 1
128 23 119 1
129 25 120 1
130 27 121 1
131 29 122 1
132 30 123 1
133 31 124 1
134 33 125 1
135 34 126 1
136 36 127 1
137 37 128 1
138 39 129 1
139 40 130 1
140 41 131 1
141 42 132 1
142 47 133 1
143 48 134 1
144 49 135 1
145 51 136 1
146 52 137 1
147 55 138 1
148 56 139 1
149 57 140 1
150 58 141 1
151 59 142 1
152 60 143 1
153 61 144 1
154 62 145 1
155 65 146 1
156 67 147 1
157 69 148 1
158 74 149 1
159 75 150 1
160 80 151 1
161 80 152 1
162 81 153 1
163 82 154 1
164 83 155 1
165 84 156 1
166 86 157 1
167 88 158 1
168 91 159 1
169 91 160 1
170 91 161 1
171 92 162 1
172 93 163 1
173 93 164 1
174 93 165 1
175 94 166 1
176 94 167 1
177 94 168 1
178 95 169 1
179 95 170 1
180 97 171 1
181 97 172 1
182 99 173 1
183 99 174 1
184 100 175 1
185 8 176 1
186 81 177 1