@COMMENT
LIGANDBOX_ID = D00926-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00926
NAME = Vancomycin_hydrochloride_(JP18/USP)_Vancoled_(TN)_Vancocin_(TN)
MOLECULAR_FORMULA = C66H75N9O24Cl2
MOLECULAR_WEIGHT = 1449.271
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 21
NUM_OF_ACCEPTOR = 24
NUM_OF_CHIRAL_ATOMS = 18
TPSA = 530.4900
HOMO = -6.5613
LUMO = -5.4826
mLOGS = -1.290
mLOGD = -1.898
mLOGPA = -8.186
@MOLECULE
D00926-02
177 186 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -2.0937 0.2347 -6.5655 C.3 1 LGD 0.3542
2 C2 -1.2869 -0.9206 -5.9115 C.3 1 LGD -0.1731
3 O1 -1.4190 0.5939 -7.7953 O.3 1 LGD -0.3705
4 C3 0.2035 -0.5694 -5.6771 C.3 1 LGD 0.1472
5 C4 -0.0415 1.0607 -7.7336 C.3 1 LGD 0.1111
6 C5 0.8448 0.0121 -6.9822 C.3 1 LGD 0.0966
7 C6 0.9832 -1.8141 -5.2012 C.3 1 LGD -0.1225
8 N1 0.2784 0.4000 -4.5758 N.4 1 LGD -0.8322
9 C7 0.0306 2.5250 -7.2143 C.3 1 LGD -0.1121
10 O2 2.1507 0.5393 -6.7205 O.3 1 LGD -0.6535
11 C8 -1.8189 1.8265 -1.5458 C.ar 1 LGD 0.0869
12 C9 -2.4874 0.9935 -0.6344 C.ar 1 LGD 0.1634
13 C10 -0.4063 1.7840 -1.6299 C.ar 1 LGD 0.0512
14 O3 -2.5856 2.6765 -2.3178 O.3 1 LGD -0.3353
15 C11 -1.7715 0.0812 0.1581 C.ar 1 LGD -0.1659
16 O4 -3.8531 1.1136 -0.4862 O.3 1 LGD -0.2569
17 C12 0.2962 0.8408 -0.8433 C.ar 1 LGD -0.2299
18 O5 0.2804 2.7065 -2.4156 O.3 1 LGD -0.2794
19 C13 -2.4677 2.7262 -3.7520 C.3 1 LGD 0.3667
20 C14 -0.3654 0.0254 0.1012 C.ar 1 LGD -0.0473
21 C15 -4.4396 1.1047 0.7585 C.ar 1 LGD 0.0671
22 C16 1.6608 2.7843 -2.5007 C.ar 1 LGD 0.1379
23 C17 -2.7578 1.3339 -4.4012 C.3 1 LGD 0.0403
24 O6 -3.3621 3.7322 -4.2953 O.3 1 LGD -0.3773
25 C18 0.4281 -0.8762 1.0847 C.3 1 LGD 0.0912
26 C19 -4.1822 2.1310 1.6901 C.ar 1 LGD -0.0015
27 C20 -5.2563 0.0242 1.1185 C.ar 1 LGD -0.1152
28 C21 2.4695 3.0379 -1.3700 C.ar 1 LGD 0.0034
29 C22 2.2762 2.5570 -3.7413 C.ar 1 LGD -0.2040
30 C23 -4.2744 0.9839 -4.4920 C.3 1 LGD 0.1008
31 C24 -4.7989 3.5112 -4.2717 C.3 1 LGD 0.1061
32 C25 -0.1626 -0.9149 2.5115 C.2 1 LGD 0.6555
33 N2 1.8185 -0.4100 1.2271 N.am 1 LGD -0.5717
34 C26 -4.6981 2.0392 2.9929 C.ar 1 LGD -0.1143
35 Cl1 -3.1806 3.5104 1.2695 Cl 1 LGD -0.1016
36 C27 -5.7617 -0.0704 2.4240 C.ar 1 LGD -0.0719
37 C28 3.8640 2.8847 -1.4624 C.ar 1 LGD -0.0608
38 Cl2 1.7678 3.5088 0.1723 Cl 1 LGD -0.0127
39 C29 3.6627 2.3829 -3.8267 C.ar 1 LGD -0.1254
40 C30 -5.1232 2.1775 -5.0093 C.3 1 LGD 0.1024
41 O7 -4.7515 0.5501 -3.2212 O.3 1 LGD -0.5747
42 N3 -0.9111 0.1690 2.9510 N.am 1 LGD -0.5773
43 O8 0.0390 -1.8584 3.2572 O.2 1 LGD -0.5011
44 C31 2.8969 -1.0008 0.5834 C.2 1 LGD 0.6553
45 C32 -5.4628 0.9238 3.3826 C.ar 1 LGD -0.0466
46 C33 4.4634 2.4889 -2.6777 C.ar 1 LGD -0.1569
47 O9 -4.8854 2.3493 -6.4069 O.3 1 LGD -0.5803
48 C34 -1.8334 0.1418 4.0995 C.3 1 LGD 0.1419
49 C35 4.3054 -0.3819 0.7189 C.3 1 LGD 0.0692
50 O10 2.7099 -1.9853 -0.1099 O.2 1 LGD -0.6370
51 C36 -5.7893 0.7249 4.8707 C.3 1 LGD 0.1913
52 C37 5.9605 2.1781 -2.7786 C.3 1 LGD 0.1990
53 C38 -1.0785 0.2277 5.4315 C.ar 1 LGD -0.1877
54 C39 -2.9143 -0.9823 4.0420 C.2 1 LGD 0.6563
55 N4 4.7082 0.1259 -0.6000 N.am 1 LGD -0.6050
56 C40 -4.5156 0.2003 5.6082 C.3 1 LGD -0.0071
57 O11 -6.8922 -0.1671 5.0443 O.3 1 LGD -0.6190
58 C41 6.3264 0.6989 -2.4403 C.3 1 LGD 0.0590
59 O12 6.7165 3.0638 -1.9565 O.3 1 LGD -0.5638
60 C42 -1.2207 -0.7587 6.4269 C.ar 1 LGD -0.0597
61 C43 -0.3355 1.3848 5.7260 C.ar 1 LGD -0.0819
62 N5 -4.0123 -0.9902 4.8956 N.am 1 LGD -0.5774
63 C44 6.0313 0.3028 -0.9828 C.2 1 LGD 0.6456
64 C45 -4.6962 -0.1300 7.1040 C.2 1 LGD 0.6533
65 N6 5.6232 -0.2456 -3.3307 N.am 1 LGD -0.5995
66 C46 -0.7628 -0.5412 7.7453 C.ar 1 LGD -0.0878
67 C47 0.2160 1.5709 7.0029 C.ar 1 LGD -0.1749
68 O13 6.9274 0.0878 -0.1847 O.2 1 LGD -0.5195
69 N7 -3.5805 0.0241 7.9136 N.am 1 LGD -0.5331
70 O14 -5.7521 -0.5182 7.5763 O.2 1 LGD -0.6045
71 C48 6.0890 -1.5423 -3.5171 C.2 1 LGD 0.6341
72 C49 -1.1123 -1.5350 8.8089 C.ar 1 LGD -0.1293
73 C50 -0.0179 0.6316 8.0190 C.ar 1 LGD 0.2133
74 C51 -3.4763 -0.4584 9.3014 C.3 1 LGD -0.0061
75 C52 5.1338 -2.6255 -4.0430 C.3 1 LGD 0.0272
76 O15 7.2482 -1.8109 -3.2566 O.2 1 LGD -0.4724
77 C53 -2.3750 -1.5310 9.4945 C.ar 1 LGD 0.0559
78 C54 -0.1705 -2.5490 9.1258 C.ar 1 LGD 0.1819
79 C55 -3.2827 0.7322 10.2574 C.2 1 LGD 0.9395
80 C56 3.9842 -2.8907 -3.0363 C.3 1 LGD -0.1065
81 N8 4.5751 -2.2723 -5.3676 N.4 1 LGD -0.7430
82 C57 -2.6355 -2.5251 10.4579 C.ar 1 LGD -0.1919
83 C58 -0.4577 -3.5266 10.0883 C.ar 1 LGD -0.3464
84 O16 1.0385 -2.5973 8.4934 O.3 1 LGD -0.4954
85 C59 -1.6892 -3.5146 10.7513 C.ar 1 LGD 0.1807
86 O17 -1.9659 -4.4646 11.6890 O.3 1 LGD -0.4912
87 O18 -2.8594 -1.9109 3.2556 O.2 1 LGD -0.6140
88 O19 0.4502 0.8866 9.2747 O.3 1 LGD -0.4932
89 O20 -4.2860 1.3352 10.5961 O.co2 1 LGD -0.8004
90 O21 -2.1473 0.9983 10.6139 O.co2 1 LGD -0.8004
91 C60 5.6252 -2.3183 -6.4046 C.3 1 LGD 0.0820
92 C61 3.0884 -4.1060 -3.4176 C.3 1 LGD -0.0673
93 C62 1.9262 -4.2667 -2.4071 C.3 1 LGD -0.0948
94 C63 3.8990 -5.4221 -3.5210 C.3 1 LGD -0.0948
95 C64 4.4034 0.7668 1.7654 C.3 1 LGD -0.1875
96 C65 4.1068 0.2943 3.1890 C.2 1 LGD 0.6494
97 N9 4.9949 -0.5479 3.8202 N.am 1 LGD -0.6799
98 O22 3.1096 0.6431 3.7931 O.2 1 LGD -0.5695
99 C66 -5.3683 3.6397 -2.8293 C.3 1 LGD 0.1194
100 O23 -6.7922 3.5784 -2.8506 O.3 1 LGD -0.6025
101 O24 -2.1785 1.4103 -5.7235 O.3 1 LGD -0.4873
102 H1 -3.1036 -0.1144 -6.8071 H 1 LGD 0.1389
103 H2 -1.7624 -1.2442 -4.9776 H 1 LGD 0.1032
104 H3 -1.3429 -1.7866 -6.5838 H 1 LGD 0.1032
105 H4 0.3270 1.0982 -8.7667 H 1 LGD 0.1071
106 H5 0.9519 -0.8309 -7.6770 H 1 LGD 0.0795
107 H6 1.0335 -2.5757 -5.9897 H 1 LGD 0.0632
108 H7 2.0078 -1.5425 -4.9238 H 1 LGD 0.0632
109 H8 0.5040 -2.2642 -4.3232 H 1 LGD 0.0632
110 H9 1.2398 0.6823 -4.4512 H 1 LGD 0.4674
111 H10 -0.2824 1.2072 -4.8098 H 1 LGD 0.4674
112 H11 0.9815 2.9873 -7.5069 H 1 LGD 0.0598
113 H12 -0.7764 3.1274 -7.6507 H 1 LGD 0.0598
114 H13 -0.0439 2.5918 -6.1251 H 1 LGD 0.0598
115 H14 2.4778 0.9332 -7.5494 H 1 LGD 0.4564
116 H15 -2.3143 -0.5639 0.8433 H 1 LGD 0.2010
117 H16 1.3728 0.7690 -0.9330 H 1 LGD 0.1291
118 H17 -1.4447 3.0225 -4.0036 H 1 LGD 0.0743
119 H18 -2.2479 0.5587 -3.8186 H 1 LGD 0.0177
120 H19 0.4037 -1.9062 0.7071 H 1 LGD 0.1182
121 H20 -5.4542 -0.7688 0.4029 H 1 LGD 0.1558
122 H21 1.6809 2.4840 -4.6418 H 1 LGD 0.1277
123 H22 -4.4063 0.1493 -5.1907 H 1 LGD 0.0795
124 H23 -5.2676 4.3176 -4.8504 H 1 LGD 0.1273
125 H24 2.0011 0.3698 1.8437 H 1 LGD 0.3573
126 H25 -4.4515 2.8075 3.7207 H 1 LGD 0.1660
127 H26 -6.3323 -0.9523 2.7003 H 1 LGD 0.1774
128 H27 4.4730 3.0286 -0.5740 H 1 LGD 0.1904
129 H28 4.1122 2.1422 -4.7863 H 1 LGD 0.1356
130 H29 -6.1848 1.9396 -4.8627 H 1 LGD 0.1368
131 H30 -4.3765 1.1392 -2.5411 H 1 LGD 0.4338
132 H31 -0.9479 0.9771 2.3471 H 1 LGD 0.3010
133 H32 -3.9219 2.4364 -6.5229 H 1 LGD 0.4063
134 H33 -2.3978 1.0768 4.0182 H 1 LGD 0.0551
135 H34 4.9819 -1.1936 1.0164 H 1 LGD 0.1082
136 H35 -6.0530 1.6992 5.3020 H 1 LGD 0.0691
137 H36 6.2601 2.3467 -3.8210 H 1 LGD 0.0514
138 H37 3.9897 0.3129 -1.2836 H 1 LGD 0.2907
139 H38 -3.7728 1.0042 5.5767 H 1 LGD 0.0753
140 H39 -6.9260 -0.3890 5.9945 H 1 LGD 0.4655
141 H40 7.4091 0.5909 -2.5864 H 1 LGD 0.1453
142 H41 6.5591 3.9666 -2.2848 H 1 LGD 0.4372
143 H42 -1.7748 -1.6707 6.2278 H 1 LGD 0.1447
144 H43 -0.2092 2.1572 4.9724 H 1 LGD 0.1130
145 H44 -4.6064 -1.8061 4.8661 H 1 LGD 0.3426
146 H45 4.6910 -0.0136 -3.6393 H 1 LGD 0.2887
147 H46 0.7794 2.4740 7.2201 H 1 LGD 0.1480
148 H47 -2.7478 0.4098 7.4925 H 1 LGD 0.3150
149 H48 -4.4316 -0.9156 9.5873 H 1 LGD 0.0921
150 H49 5.7244 -3.5378 -4.1452 H 1 LGD 0.1515
151 H50 4.4195 -3.0706 -2.0442 H 1 LGD 0.0916
152 H51 3.3637 -1.9904 -2.9414 H 1 LGD 0.0916
153 H52 3.8546 -2.9418 -5.6044 H 1 LGD 0.4464
154 H53 -3.5807 -2.5246 10.9939 H 1 LGD 0.1604
155 H54 0.2750 -4.2951 10.3188 H 1 LGD 0.1207
156 H55 1.5364 -3.3539 8.8465 H 1 LGD 0.4152
157 H56 -1.1956 -5.0538 11.7613 H 1 LGD 0.4174
158 H57 -0.1087 0.3972 9.9065 H 1 LGD 0.4848
159 H58 6.4073 -1.5933 -6.1713 H 1 LGD 0.1120
160 H59 6.0608 -3.3191 -6.4396 H 1 LGD 0.1120
161 H60 5.1910 -2.0810 -7.3776 H 1 LGD 0.1120
162 H61 2.6453 -3.9173 -4.4024 H 1 LGD -0.0088
163 H62 2.3049 -4.5314 -1.4116 H 1 LGD 0.0560
164 H63 1.3523 -3.3362 -2.3144 H 1 LGD 0.0560
165 H64 1.2358 -5.0564 -2.7299 H 1 LGD 0.0560
166 H65 4.6364 -5.3722 -4.3316 H 1 LGD 0.0560
167 H66 4.4294 -5.6327 -2.5836 H 1 LGD 0.0560
168 H67 3.2345 -6.2696 -3.7331 H 1 LGD 0.0560
169 H68 5.4167 1.1875 1.7597 H 1 LGD 0.0832
170 H69 3.7211 1.5855 1.5052 H 1 LGD 0.0832
171 H70 5.8380 -0.8416 3.3493 H 1 LGD 0.3297
172 H71 4.8011 -0.8576 4.7611 H 1 LGD 0.3297
173 H72 -4.9870 2.8454 -2.1819 H 1 LGD 0.0435
174 H73 -5.0464 4.5983 -2.4036 H 1 LGD 0.0435
175 H74 -7.1015 3.6293 -1.9290 H 1 LGD 0.4287
176 H75 -0.0666 -0.0157 -3.7228 H 1 LGD 0.4674
177 H76 4.1651 -1.3491 -5.3371 H 1 LGD 0.4464
@BOND
1 1 2 1
2 1 3 1
3 2 4 1
4 3 5 1
5 4 6 1
6 4 7 1
7 4 8 1
8 5 9 1
9 6 10 1
10 5 6 1
11 11 12 ar
12 11 13 ar
13 11 14 1
14 12 15 ar
15 12 16 1
16 13 17 ar
17 13 18 1
18 14 19 1
19 15 20 ar
20 16 21 1
21 18 22 1
22 19 23 1
23 19 24 1
24 20 25 1
25 21 26 ar
26 21 27 ar
27 22 28 ar
28 22 29 ar
29 23 30 1
30 24 31 1
31 25 32 1
32 25 33 1
33 26 34 ar
34 26 35 1
35 27 36 ar
36 28 37 ar
37 28 38 1
38 29 39 ar
39 30 40 1
40 30 41 1
41 32 42 am
42 32 43 2
43 33 44 am
44 34 45 ar
45 37 46 ar
46 40 47 1
47 42 48 1
48 44 49 1
49 44 50 2
50 45 51 1
51 46 52 1
52 48 53 1
53 48 54 1
54 49 55 1
55 51 56 1
56 51 57 1
57 52 58 1
58 52 59 1
59 53 60 ar
60 53 61 ar
61 54 62 am
62 55 63 am
63 56 64 1
64 58 65 1
65 60 66 ar
66 61 67 ar
67 63 68 2
68 64 69 am
69 64 70 2
70 65 71 am
71 66 72 1
72 66 73 ar
73 69 74 1
74 71 75 1
75 71 76 2
76 72 77 ar
77 72 78 ar
78 74 79 1
79 75 80 1
80 75 81 1
81 77 82 ar
82 78 83 ar
83 78 84 1
84 82 85 ar
85 85 86 1
86 17 20 ar
87 31 40 1
88 36 45 ar
89 39 46 ar
90 56 62 1
91 58 63 1
92 67 73 ar
93 74 77 1
94 83 85 ar
95 54 87 2
96 73 88 1
97 79 89 1
98 79 90 2
99 81 91 1
100 80 92 1
101 92 93 1
102 92 94 1
103 49 95 1
104 95 96 1
105 96 97 am
106 96 98 2
107 31 99 1
108 99 100 1
109 23 101 1
110 1 101 1
111 1 102 1
112 2 103 1
113 2 104 1
114 5 105 1
115 6 106 1
116 7 107 1
117 7 108 1
118 7 109 1
119 8 110 1
120 8 111 1
121 9 112 1
122 9 113 1
123 9 114 1
124 10 115 1
125 15 116 1
126 17 117 1
127 19 118 1
128 23 119 1
129 25 120 1
130 27 121 1
131 29 122 1
132 30 123 1
133 31 124 1
134 33 125 1
135 34 126 1
136 36 127 1
137 37 128 1
138 39 129 1
139 40 130 1
140 41 131 1
141 42 132 1
142 47 133 1
143 48 134 1
144 49 135 1
145 51 136 1
146 52 137 1
147 55 138 1
148 56 139 1
149 57 140 1
150 58 141 1
151 59 142 1
152 60 143 1
153 61 144 1
154 62 145 1
155 65 146 1
156 67 147 1
157 69 148 1
158 74 149 1
159 75 150 1
160 80 151 1
161 80 152 1
162 81 153 1
163 82 154 1
164 83 155 1
165 84 156 1
166 86 157 1
167 88 158 1
168 91 159 1
169 91 160 1
170 91 161 1
171 92 162 1
172 93 163 1
173 93 164 1
174 93 165 1
175 94 166 1
176 94 167 1
177 94 168 1
178 95 169 1
179 95 170 1
180 97 171 1
181 97 172 1
182 99 173 1
183 99 174 1
184 100 175 1
185 8 176 1
186 81 177 1