@COMMENT
LIGANDBOX_ID = D00926-03
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00926
NAME = Vancomycin_hydrochloride_(JP18/USP)_Vancoled_(TN)_Vancocin_(TN)
MOLECULAR_FORMULA = C66H75N9O24Cl2
MOLECULAR_WEIGHT = 1449.271
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 21
NUM_OF_ACCEPTOR = 24
NUM_OF_CHIRAL_ATOMS = 18
TPSA = 530.4900
HOMO = -6.5613
LUMO = -5.4826
mLOGS = -1.290
mLOGD = -1.898
mLOGPA = -8.186
@MOLECULE
D00926-03
177 186 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 1.4900 -0.5018 5.9532 C.3 1 LGD 0.3461
2 C2 2.5557 -1.1337 6.8756 C.3 1 LGD -0.1324
3 O1 2.1465 -0.0801 4.7383 O.3 1 LGD -0.4184
4 C3 3.7255 -0.1518 7.1642 C.3 1 LGD 0.1016
5 C4 3.1487 0.9536 4.8636 C.3 1 LGD 0.1498
6 C5 4.2775 0.4707 5.8295 C.3 1 LGD 0.1032
7 C6 4.8385 -0.8576 7.9858 C.3 1 LGD -0.1387
8 N1 3.2146 0.9284 8.0286 N.4 1 LGD -0.8271
9 C7 2.4852 2.3083 5.2269 C.3 1 LGD -0.1338
10 O2 5.0800 -0.4864 5.1315 O.3 1 LGD -0.5919
11 C8 -1.5341 -1.6087 1.9392 C.ar 1 LGD 0.0870
12 C9 -2.3220 -0.6193 1.3274 C.ar 1 LGD 0.1487
13 C10 -0.2782 -1.9367 1.3786 C.ar 1 LGD 0.0995
14 O3 -2.0260 -2.2214 3.0796 O.3 1 LGD -0.3473
15 C11 -1.8324 0.1034 0.2246 C.ar 1 LGD -0.1698
16 O4 -3.5986 -0.3826 1.7928 O.3 1 LGD -0.2613
17 C12 0.1813 -1.2343 0.2436 C.ar 1 LGD -0.1915
18 O5 0.4665 -2.9802 1.8997 O.3 1 LGD -0.2648
19 C13 -1.2136 -2.4618 4.2504 C.3 1 LGD 0.3707
20 C14 -0.5855 -0.2101 -0.3525 C.ar 1 LGD -0.0585
21 C15 -4.6486 -0.2296 0.9141 C.ar 1 LGD 0.0809
22 C16 1.7902 -3.1918 1.5916 C.ar 1 LGD 0.1401
23 C17 -0.5564 -1.1384 4.7502 C.3 1 LGD 0.0324
24 O6 -2.0119 -3.0579 5.3072 O.3 1 LGD -0.3915
25 C18 -0.0975 0.5519 -1.6149 C.3 1 LGD 0.0994
26 C19 -5.0365 -1.2768 0.0517 C.ar 1 LGD -0.0040
27 C20 -5.2898 1.0141 0.8298 C.ar 1 LGD -0.1218
28 C21 2.1573 -3.8677 0.4134 C.ar 1 LGD 0.0185
29 C22 2.7794 -2.6841 2.4439 C.ar 1 LGD -0.1359
30 C23 -1.5629 -0.2008 5.4887 C.3 1 LGD 0.0995
31 C24 -3.0470 -2.2765 5.9623 C.3 1 LGD 0.1100
32 C25 -1.1917 0.7174 -2.6885 C.2 1 LGD 0.6577
33 N2 1.0462 -0.1140 -2.2617 N.am 1 LGD -0.5692
34 C26 -6.0196 -1.0522 -0.9260 C.ar 1 LGD -0.1150
35 Cl1 -4.2786 -2.8586 0.1381 Cl 1 LGD -0.1003
36 C27 -6.2665 1.2375 -0.1531 C.ar 1 LGD -0.0739
37 C28 3.5118 -3.9646 0.0562 C.ar 1 LGD -0.0816
38 Cl2 0.9336 -4.5439 -0.6484 Cl 1 LGD -0.0278
39 C29 4.1327 -2.7960 2.0960 C.ar 1 LGD -0.1578
40 C30 -2.4182 -0.9698 6.5358 C.3 1 LGD 0.0963
41 O7 -2.4091 0.4465 4.5406 O.3 1 LGD -0.5782
42 N3 -2.2762 -0.1484 -2.6700 N.am 1 LGD -0.5757
43 O8 -1.1128 1.5772 -3.5498 O.2 1 LGD -0.5152
44 C31 2.3626 0.0727 -1.8610 C.2 1 LGD 0.6585
45 C32 -6.6198 0.2136 -1.0607 C.ar 1 LGD -0.0551
46 C33 4.5115 -3.4059 0.8836 C.ar 1 LGD -0.1497
47 O9 -1.5944 -1.3048 7.6533 O.3 1 LGD -0.6035
48 C34 -3.5646 0.1219 -3.3275 C.3 1 LGD 0.1405
49 C35 3.4789 -0.8346 -2.4347 C.3 1 LGD 0.0697
50 O10 2.6069 0.9178 -1.0156 O.2 1 LGD -0.6491
51 C36 -7.4955 0.5000 -2.2920 C.3 1 LGD 0.1937
52 C37 5.9895 -3.3988 0.4679 C.3 1 LGD 0.1979
53 C38 -3.4675 -0.0593 -4.8466 C.ar 1 LGD -0.1839
54 C39 -4.2390 1.4581 -2.8875 C.2 1 LGD 0.6542
55 N4 4.3215 -1.2822 -1.3154 N.am 1 LGD -0.5974
56 C40 -6.5768 0.7307 -3.5360 C.3 1 LGD -0.0064
57 O11 -8.3519 1.6215 -2.0671 O.3 1 LGD -0.6211
58 C41 6.4333 -2.0558 -0.1867 C.3 1 LGD 0.0638
59 O12 6.2892 -4.4846 -0.4066 O.3 1 LGD -0.5669
60 C42 -3.7452 0.9989 -5.7329 C.ar 1 LGD -0.0593
61 C43 -3.2260 -1.3403 -5.3739 C.ar 1 LGD -0.0809
62 N5 -5.5646 1.7475 -3.1909 N.am 1 LGD -0.5793
63 C44 5.6378 -1.7022 -1.4575 C.2 1 LGD 0.6510
64 C45 -7.2909 1.1425 -4.8411 C.2 1 LGD 0.6550
65 N6 6.2807 -0.9648 0.7892 N.am 1 LGD -0.6019
66 C46 -3.9431 0.7649 -7.1115 C.ar 1 LGD -0.0934
67 C47 -3.3081 -1.5673 -6.7566 C.ar 1 LGD -0.1757
68 O13 6.1477 -1.7371 -2.5644 O.2 1 LGD -0.5349
69 N7 -6.6053 0.8980 -6.0214 N.am 1 LGD -0.5386
70 O14 -8.3938 1.6636 -4.8646 O.2 1 LGD -0.6046
71 C48 6.9109 0.2605 0.6427 C.2 1 LGD 0.6354
72 C49 -4.4625 1.8763 -7.9682 C.ar 1 LGD -0.1280
73 C50 -3.6945 -0.5320 -7.6219 C.ar 1 LGD 0.2115
74 C51 -6.9913 1.4099 -7.3473 C.3 1 LGD -0.0033
75 C52 6.4395 1.4327 1.5141 C.3 1 LGD 0.0309
76 O15 7.8185 0.3896 -0.1594 O.2 1 LGD -0.4831
77 C53 -5.8586 2.2089 -8.0439 C.ar 1 LGD 0.0603
78 C54 -3.5355 2.6567 -8.7077 C.ar 1 LGD 0.1810
79 C55 -7.4992 0.2530 -8.2280 C.2 1 LGD 0.9383
80 C56 4.9795 1.8152 1.1627 C.3 1 LGD -0.1133
81 N8 6.5230 1.1063 2.9563 N.4 1 LGD -0.7461
82 C57 -6.2614 3.2925 -8.8489 C.ar 1 LGD -0.1926
83 C58 -3.9657 3.7296 -9.5004 C.ar 1 LGD -0.3474
84 O16 -2.1994 2.3803 -8.6596 O.3 1 LGD -0.4939
85 C59 -5.3263 4.0470 -9.5685 C.ar 1 LGD 0.1789
86 O17 -5.7430 5.0885 -10.3432 O.3 1 LGD -0.4931
87 O18 -3.6457 2.3231 -2.2683 O.2 1 LGD -0.6136
88 O19 -3.8625 -0.8058 -8.9476 O.3 1 LGD -0.4901
89 O20 -8.6259 -0.1544 -8.0055 O.co2 1 LGD -0.8012
90 O21 -6.7501 -0.1832 -9.0859 O.co2 1 LGD -0.8012
91 C60 7.9230 0.8921 3.3749 C.3 1 LGD 0.0849
92 C61 4.4773 3.0945 1.8885 C.3 1 LGD -0.0633
93 C62 2.9730 3.3190 1.6027 C.3 1 LGD -0.0980
94 C63 5.3019 4.3448 1.4934 C.3 1 LGD -0.0980
95 C64 2.9507 -2.0936 -3.1855 C.3 1 LGD -0.1854
96 C65 2.2856 -1.7519 -4.5196 C.2 1 LGD 0.6509
97 N9 3.0561 -1.2760 -5.5570 N.am 1 LGD -0.6806
98 O22 1.0902 -1.8875 -4.7027 O.2 1 LGD -0.5784
99 C66 -4.2812 -2.0852 5.0352 C.3 1 LGD 0.1186
100 O23 -5.3556 -1.4879 5.7566 O.3 1 LGD -0.6106
101 O24 0.5217 -1.5222 5.6362 O.3 1 LGD -0.3872
102 H1 1.0030 0.3447 6.4476 H 1 LGD 0.0357
103 H2 2.0850 -1.4499 7.8156 H 1 LGD 0.1145
104 H3 2.9457 -2.0416 6.3966 H 1 LGD 0.1145
105 H4 3.6078 1.0915 3.8776 H 1 LGD 0.0923
106 H5 4.9086 1.3327 6.0812 H 1 LGD 0.0323
107 H6 5.2200 -1.7459 7.4663 H 1 LGD 0.0842
108 H7 5.6824 -0.1804 8.1695 H 1 LGD 0.0842
109 H8 4.4549 -1.1892 8.9596 H 1 LGD 0.0842
110 H9 3.9558 1.5843 8.2306 H 1 LGD 0.4624
111 H10 2.4566 1.4093 7.5684 H 1 LGD 0.4624
112 H11 3.2450 3.0957 5.3076 H 1 LGD 0.0639
113 H12 1.7808 2.6055 4.4401 H 1 LGD 0.0639
114 H13 1.9311 2.2760 6.1701 H 1 LGD 0.0639
115 H14 5.8474 -0.6898 5.6954 H 1 LGD 0.4256
116 H15 -2.4416 0.8955 -0.2017 H 1 LGD 0.1899
117 H16 1.1408 -1.4975 -0.1801 H 1 LGD 0.1347
118 H17 -0.4243 -3.1749 3.9962 H 1 LGD 0.1129
119 H18 -0.1372 -0.6028 3.8896 H 1 LGD 0.0793
120 H19 0.1922 1.5658 -1.3105 H 1 LGD 0.1112
121 H20 -4.9911 1.8239 1.4894 H 1 LGD 0.1526
122 H21 2.4961 -2.1866 3.3647 H 1 LGD 0.1528
123 H22 -1.0049 0.5801 6.0186 H 1 LGD 0.0521
124 H23 -3.4081 -2.8601 6.8190 H 1 LGD 0.1156
125 H24 0.8575 -0.7858 -2.9935 H 1 LGD 0.3613
126 H25 -6.2737 -1.8481 -1.6206 H 1 LGD 0.1621
127 H26 -6.6976 2.2302 -0.2441 H 1 LGD 0.1721
128 H27 3.7750 -4.4429 -0.8830 H 1 LGD 0.1806
129 H28 4.8866 -2.3804 2.7586 H 1 LGD 0.1063
130 H29 -3.2247 -0.3098 6.8806 H 1 LGD 0.1283
131 H30 -2.6559 -0.2123 3.8658 H 1 LGD 0.4401
132 H31 -2.2386 -0.9203 -2.0204 H 1 LGD 0.3077
133 H32 -0.8931 -1.8911 7.3164 H 1 LGD 0.4040
134 H33 -4.2320 -0.6688 -2.9683 H 1 LGD 0.0581
135 H34 4.0762 -0.2233 -3.1234 H 1 LGD 0.1043
136 H35 -8.1166 -0.3831 -2.4895 H 1 LGD 0.0662
137 H36 6.5866 -3.5252 1.3801 H 1 LGD 0.0403
138 H37 3.9340 -1.2514 -0.3834 H 1 LGD 0.3060
139 H38 -6.0932 -0.2255 -3.7613 H 1 LGD 0.0765
140 H39 -8.7629 1.8352 -2.9265 H 1 LGD 0.4634
141 H40 7.4898 -2.1441 -0.4717 H 1 LGD 0.1365
142 H41 6.1033 -5.3066 0.0805 H 1 LGD 0.4329
143 H42 -3.9226 2.0026 -5.3588 H 1 LGD 0.1450
144 H43 -3.0021 -2.1695 -4.7085 H 1 LGD 0.1184
145 H44 -5.8904 2.6762 -2.9657 H 1 LGD 0.3393
146 H45 5.5698 -1.0575 1.4993 H 1 LGD 0.3020
147 H46 -3.1283 -2.5634 -7.1509 H 1 LGD 0.1480
148 H47 -5.7341 0.3928 -5.9554 H 1 LGD 0.3157
149 H48 -7.8439 2.0893 -7.2249 H 1 LGD 0.0873
150 H49 7.0974 2.2767 1.2989 H 1 LGD 0.1454
151 H50 4.9057 1.9694 0.0779 H 1 LGD 0.1051
152 H51 4.3148 0.9744 1.4018 H 1 LGD 0.1051
153 H52 6.1353 1.8756 3.4852 H 1 LGD 0.4477
154 H53 -7.3151 3.5457 -8.9273 H 1 LGD 0.1585
155 H54 -3.2429 4.3158 -10.0612 H 1 LGD 0.1195
156 H55 -1.7359 3.0175 -9.2291 H 1 LGD 0.4146
157 H56 -4.9626 5.4798 -10.7717 H 1 LGD 0.4164
158 H57 -4.4441 -0.1192 -9.3228 H 1 LGD 0.4796
159 H58 8.3515 0.0569 2.8173 H 1 LGD 0.1063
160 H59 8.5065 1.7937 3.1790 H 1 LGD 0.1063
161 H60 7.9553 0.6657 4.4422 H 1 LGD 0.1063
162 H61 4.5897 2.9522 2.9702 H 1 LGD -0.0226
163 H62 2.7986 3.5015 0.5344 H 1 LGD 0.0562
164 H63 2.3837 2.4413 1.8974 H 1 LGD 0.0562
165 H64 2.5944 4.1826 2.1640 H 1 LGD 0.0562
166 H65 6.3524 4.2378 1.7906 H 1 LGD 0.0562
167 H66 5.2666 4.5131 0.4094 H 1 LGD 0.0562
168 H67 4.9080 5.2409 1.9896 H 1 LGD 0.0562
169 H68 3.7827 -2.7758 -3.4009 H 1 LGD 0.0844
170 H69 2.2434 -2.6470 -2.5556 H 1 LGD 0.0844
171 H70 4.0521 -1.1633 -5.4387 H 1 LGD 0.3294
172 H71 2.6172 -1.0504 -6.4375 H 1 LGD 0.3294
173 H72 -4.0358 -1.4566 4.1752 H 1 LGD 0.0493
174 H73 -4.5935 -3.0651 4.6527 H 1 LGD 0.0493
175 H74 -6.1077 -1.4047 5.1440 H 1 LGD 0.4279
176 H75 2.8769 0.5357 8.8961 H 1 LGD 0.4624
177 H76 5.9772 0.2777 3.1561 H 1 LGD 0.4477
@BOND
1 1 2 1
2 1 3 1
3 2 4 1
4 3 5 1
5 4 6 1
6 4 7 1
7 4 8 1
8 5 9 1
9 6 10 1
10 5 6 1
11 11 12 ar
12 11 13 ar
13 11 14 1
14 12 15 ar
15 12 16 1
16 13 17 ar
17 13 18 1
18 14 19 1
19 15 20 ar
20 16 21 1
21 18 22 1
22 19 23 1
23 19 24 1
24 20 25 1
25 21 26 ar
26 21 27 ar
27 22 28 ar
28 22 29 ar
29 23 30 1
30 24 31 1
31 25 32 1
32 25 33 1
33 26 34 ar
34 26 35 1
35 27 36 ar
36 28 37 ar
37 28 38 1
38 29 39 ar
39 30 40 1
40 30 41 1
41 32 42 am
42 32 43 2
43 33 44 am
44 34 45 ar
45 37 46 ar
46 40 47 1
47 42 48 1
48 44 49 1
49 44 50 2
50 45 51 1
51 46 52 1
52 48 53 1
53 48 54 1
54 49 55 1
55 51 56 1
56 51 57 1
57 52 58 1
58 52 59 1
59 53 60 ar
60 53 61 ar
61 54 62 am
62 55 63 am
63 56 64 1
64 58 65 1
65 60 66 ar
66 61 67 ar
67 63 68 2
68 64 69 am
69 64 70 2
70 65 71 am
71 66 72 1
72 66 73 ar
73 69 74 1
74 71 75 1
75 71 76 2
76 72 77 ar
77 72 78 ar
78 74 79 1
79 75 80 1
80 75 81 1
81 77 82 ar
82 78 83 ar
83 78 84 1
84 82 85 ar
85 85 86 1
86 17 20 ar
87 31 40 1
88 36 45 ar
89 39 46 ar
90 56 62 1
91 58 63 1
92 67 73 ar
93 74 77 1
94 83 85 ar
95 54 87 2
96 73 88 1
97 79 89 1
98 79 90 2
99 81 91 1
100 80 92 1
101 92 93 1
102 92 94 1
103 49 95 1
104 95 96 1
105 96 97 am
106 96 98 2
107 31 99 1
108 99 100 1
109 23 101 1
110 1 101 1
111 1 102 1
112 2 103 1
113 2 104 1
114 5 105 1
115 6 106 1
116 7 107 1
117 7 108 1
118 7 109 1
119 8 110 1
120 8 111 1
121 9 112 1
122 9 113 1
123 9 114 1
124 10 115 1
125 15 116 1
126 17 117 1
127 19 118 1
128 23 119 1
129 25 120 1
130 27 121 1
131 29 122 1
132 30 123 1
133 31 124 1
134 33 125 1
135 34 126 1
136 36 127 1
137 37 128 1
138 39 129 1
139 40 130 1
140 41 131 1
141 42 132 1
142 47 133 1
143 48 134 1
144 49 135 1
145 51 136 1
146 52 137 1
147 55 138 1
148 56 139 1
149 57 140 1
150 58 141 1
151 59 142 1
152 60 143 1
153 61 144 1
154 62 145 1
155 65 146 1
156 67 147 1
157 69 148 1
158 74 149 1
159 75 150 1
160 80 151 1
161 80 152 1
162 81 153 1
163 82 154 1
164 83 155 1
165 84 156 1
166 86 157 1
167 88 158 1
168 91 159 1
169 91 160 1
170 91 161 1
171 92 162 1
172 93 163 1
173 93 164 1
174 93 165 1
175 94 166 1
176 94 167 1
177 94 168 1
178 95 169 1
179 95 170 1
180 97 171 1
181 97 172 1
182 99 173 1
183 99 174 1
184 100 175 1
185 8 176 1
186 81 177 1