@COMMENT
LIGANDBOX_ID = D00926-04
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00926
NAME = Vancomycin_hydrochloride_(JP18/USP)_Vancoled_(TN)_Vancocin_(TN)
MOLECULAR_FORMULA = C66H75N9O24Cl2
MOLECULAR_WEIGHT = 1449.271
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 21
NUM_OF_ACCEPTOR = 24
NUM_OF_CHIRAL_ATOMS = 18
TPSA = 530.4900
HOMO = -6.5613
LUMO = -5.4826
mLOGS = -1.290
mLOGD = -1.898
mLOGPA = -8.186
@MOLECULE
D00926-04
177 186 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 1.3496 -0.6918 6.2453 C.3 1 LGD 0.3432
2 C2 2.3770 -1.3581 7.1929 C.3 1 LGD -0.1362
3 O1 2.0528 -0.2462 5.0767 O.3 1 LGD -0.4278
4 C3 3.5715 -0.4091 7.5111 C.3 1 LGD 0.1003
5 C4 3.0138 0.7893 5.3108 C.3 1 LGD 0.1611
6 C5 4.1492 0.1935 6.1892 C.3 1 LGD 0.0801
7 C6 4.6662 -1.1613 8.3105 C.3 1 LGD -0.1310
8 N1 3.0767 0.6912 8.3616 N.4 1 LGD -0.8193
9 C7 3.5038 1.2508 3.9318 C.3 1 LGD -0.0869
10 O2 5.1321 1.1950 6.4698 O.3 1 LGD -0.6100
11 C8 -1.5691 -1.5860 2.0161 C.ar 1 LGD 0.0919
12 C9 -2.3647 -0.6122 1.3867 C.ar 1 LGD 0.1510
13 C10 -0.3018 -1.8979 1.4689 C.ar 1 LGD 0.0952
14 O3 -2.0805 -2.2109 3.1439 O.3 1 LGD -0.3529
15 C11 -1.8789 0.1044 0.2775 C.ar 1 LGD -0.1679
16 O4 -3.6471 -0.3848 1.8413 O.3 1 LGD -0.2598
17 C12 0.1536 -1.2005 0.3274 C.ar 1 LGD -0.1928
18 O5 0.4607 -2.9209 2.0052 O.3 1 LGD -0.2662
19 C13 -1.3014 -2.5185 4.3232 C.3 1 LGD 0.3741
20 C14 -0.6257 -0.1987 -0.2897 C.ar 1 LGD -0.0582
21 C15 -4.6910 -0.2300 0.9558 C.ar 1 LGD 0.0802
22 C16 1.7846 -3.1197 1.6853 C.ar 1 LGD 0.1443
23 C17 -0.6237 -1.2368 4.8924 C.3 1 LGD 0.0329
24 O6 -2.1456 -3.1186 5.3421 O.3 1 LGD -0.3910
25 C18 -0.1380 0.5546 -1.5586 C.3 1 LGD 0.0989
26 C19 -5.0736 -1.2763 0.0904 C.ar 1 LGD -0.0038
27 C20 -5.3313 1.0140 0.8683 C.ar 1 LGD -0.1214
28 C21 2.1506 -3.8096 0.5145 C.ar 1 LGD 0.0202
29 C22 2.7749 -2.5749 2.5126 C.ar 1 LGD -0.1419
30 C23 -1.6377 -0.2778 5.5906 C.3 1 LGD 0.0986
31 C24 -3.1818 -2.3258 5.9862 C.3 1 LGD 0.1109
32 C25 -1.2292 0.7220 -2.6356 C.2 1 LGD 0.6573
33 N2 1.0015 -0.1201 -2.2040 N.am 1 LGD -0.5687
34 C26 -6.0525 -1.0518 -0.8915 C.ar 1 LGD -0.1153
35 Cl1 -4.3135 -2.8568 0.1799 Cl 1 LGD -0.1012
36 C27 -6.3037 1.2375 -0.1190 C.ar 1 LGD -0.0738
37 C28 3.5034 -3.8925 0.1459 C.ar 1 LGD -0.0807
38 Cl2 0.9277 -4.5205 -0.5254 Cl 1 LGD -0.0248
39 C29 4.1264 -2.6674 2.1513 C.ar 1 LGD -0.1607
40 C30 -2.5502 -1.0360 6.5961 C.3 1 LGD 0.0966
41 O7 -2.4284 0.3943 4.6123 O.3 1 LGD -0.5772
42 N3 -2.3131 -0.1448 -2.6267 N.am 1 LGD -0.5759
43 O8 -1.1468 1.5841 -3.4943 O.2 1 LGD -0.5152
44 C31 2.3225 0.0880 -1.8302 C.2 1 LGD 0.6576
45 C32 -6.6538 0.2134 -1.0277 C.ar 1 LGD -0.0547
46 C33 4.5029 -3.3013 0.9515 C.ar 1 LGD -0.1471
47 O9 -1.7807 -1.3945 7.7446 O.3 1 LGD -0.6021
48 C34 -3.5975 0.1272 -3.2928 C.3 1 LGD 0.1407
49 C35 3.4381 -0.8148 -2.4108 C.3 1 LGD 0.0691
50 O10 2.5738 0.9492 -1.0031 O.2 1 LGD -0.6482
51 C36 -7.5291 0.4985 -2.2597 C.3 1 LGD 0.1937
52 C37 5.9792 -3.2987 0.5312 C.3 1 LGD 0.1984
53 C38 -3.4952 -0.0502 -4.8129 C.ar 1 LGD -0.1836
54 C39 -4.2752 1.4617 -2.8530 C.2 1 LGD 0.6538
55 N4 4.2913 -1.2528 -1.2969 N.am 1 LGD -0.5980
56 C40 -6.6110 0.7304 -3.5037 C.3 1 LGD -0.0065
57 O11 -8.3874 1.6187 -2.0354 O.3 1 LGD -0.6210
58 C41 6.4213 -1.9844 -0.1809 C.3 1 LGD 0.0611
59 O12 6.2813 -4.4182 -0.2991 O.3 1 LGD -0.5666
60 C42 -3.7713 1.0098 -5.6983 C.ar 1 LGD -0.0593
61 C43 -3.2555 -1.3307 -5.3426 C.ar 1 LGD -0.0809
62 N5 -5.6006 1.7489 -3.1586 N.am 1 LGD -0.5794
63 C44 5.6077 -1.6679 -1.4481 C.2 1 LGD 0.6487
64 C45 -7.3253 1.1412 -4.8088 C.2 1 LGD 0.6551
65 N6 6.3072 -0.8428 0.7426 N.am 1 LGD -0.6020
66 C46 -3.9694 0.7781 -7.0777 C.ar 1 LGD -0.0935
67 C47 -3.3374 -1.5554 -6.7258 C.ar 1 LGD -0.1756
68 O13 6.1039 -1.7231 -2.5604 O.2 1 LGD -0.5341
69 N7 -6.6309 0.9132 -5.9872 N.am 1 LGD -0.5393
70 O14 -8.4349 1.6477 -4.8341 O.2 1 LGD -0.6038
71 C48 7.0156 0.3343 0.5474 C.2 1 LGD 0.6341
72 C49 -4.4895 1.8894 -7.9349 C.ar 1 LGD -0.1288
73 C50 -3.7220 -0.5183 -7.5897 C.ar 1 LGD 0.2112
74 C51 -7.0186 1.4247 -7.3124 C.3 1 LGD -0.0032
75 C52 6.5769 1.5963 1.3033 C.3 1 LGD 0.0303
76 O15 7.9690 0.3537 -0.2103 O.2 1 LGD -0.4806
77 C53 -5.8857 2.2221 -8.0108 C.ar 1 LGD 0.0611
78 C54 -3.5635 2.6662 -8.6797 C.ar 1 LGD 0.1806
79 C55 -7.5291 0.2678 -8.1917 C.2 1 LGD 0.9380
80 C56 5.1815 2.0605 0.8071 C.3 1 LGD -0.1108
81 N8 6.5305 1.3621 2.7656 N.4 1 LGD -0.7454
82 C57 -6.2891 3.3030 -8.8191 C.ar 1 LGD -0.1923
83 C58 -3.9945 3.7360 -9.4762 C.ar 1 LGD -0.3475
84 O16 -2.2276 2.3882 -8.6345 O.3 1 LGD -0.4944
85 C59 -5.3549 4.0542 -9.5432 C.ar 1 LGD 0.1792
86 O17 -5.7724 5.0924 -10.3219 O.3 1 LGD -0.4929
87 O18 -3.6847 2.3277 -2.2324 O.2 1 LGD -0.6131
88 O19 -3.8898 -0.7898 -8.9161 O.3 1 LGD -0.4890
89 O20 -8.6515 -0.1462 -7.9597 O.co2 1 LGD -0.8010
90 O21 -6.7861 -0.1621 -9.0580 O.co2 1 LGD -0.8010
91 C60 7.8634 1.0306 3.3087 C.3 1 LGD 0.0840
92 C61 4.7528 3.4552 1.3467 C.3 1 LGD -0.0648
93 C62 3.2755 3.7488 0.9858 C.3 1 LGD -0.0954
94 C63 5.6742 4.5861 0.8302 C.3 1 LGD -0.0954
95 C64 2.9111 -2.0782 -3.1545 C.3 1 LGD -0.1852
96 C65 2.2405 -1.7400 -4.4865 C.2 1 LGD 0.6508
97 N9 3.0073 -1.2658 -5.5275 N.am 1 LGD -0.6807
98 O22 1.0445 -1.8767 -4.6646 O.2 1 LGD -0.5776
99 C66 -4.3896 -2.0961 5.0346 C.3 1 LGD 0.1183
100 O23 -5.4719 -1.4985 5.7440 O.3 1 LGD -0.6105
101 O24 0.3796 -1.6792 5.8423 O.3 1 LGD -0.3862
102 H1 0.8600 0.1542 6.7400 H 1 LGD 0.0390
103 H2 1.8768 -1.6623 8.1213 H 1 LGD 0.1123
104 H3 2.7530 -2.2751 6.7198 H 1 LGD 0.1123
105 H4 2.5392 1.6355 5.8245 H 1 LGD 0.0532
106 H5 4.6185 -0.6193 5.6192 H 1 LGD 0.0819
107 H6 5.1011 -1.9716 7.7114 H 1 LGD 0.0826
108 H7 5.4794 -0.4864 8.6069 H 1 LGD 0.0826
109 H8 4.2500 -1.6036 9.2246 H 1 LGD 0.0826
110 H9 3.8286 1.3479 8.5201 H 1 LGD 0.4633
111 H10 2.3185 1.1698 7.8979 H 1 LGD 0.4633
112 H11 2.6640 1.6221 3.3320 H 1 LGD 0.0560
113 H12 4.2278 2.0632 4.0474 H 1 LGD 0.0560
114 H13 3.9767 0.4240 3.3874 H 1 LGD 0.0560
115 H14 5.9321 0.7410 6.7890 H 1 LGD 0.4294
116 H15 -2.4957 0.8838 -0.1608 H 1 LGD 0.1904
117 H16 1.1207 -1.4500 -0.0874 H 1 LGD 0.1333
118 H17 -0.5283 -3.2471 4.0616 H 1 LGD 0.1129
119 H18 -0.1349 -0.7037 4.0675 H 1 LGD 0.0776
120 H19 0.1566 1.5687 -1.2597 H 1 LGD 0.1124
121 H20 -5.0359 1.8237 1.5295 H 1 LGD 0.1533
122 H21 2.4916 -2.0635 3.4245 H 1 LGD 0.1494
123 H22 -1.0849 0.4875 6.1477 H 1 LGD 0.0539
124 H23 -3.5738 -2.9159 6.8247 H 1 LGD 0.1161
125 H24 0.8080 -0.8053 -2.9221 H 1 LGD 0.3611
126 H25 -6.3034 -1.8478 -1.5873 H 1 LGD 0.1621
127 H26 -6.7349 2.2301 -0.2114 H 1 LGD 0.1724
128 H27 3.7654 -4.3875 -0.7851 H 1 LGD 0.1820
129 H28 4.8804 -2.2241 2.7955 H 1 LGD 0.0975
130 H29 -3.3560 -0.3611 6.9125 H 1 LGD 0.1287
131 H30 -2.6583 -0.2548 3.9222 H 1 LGD 0.4392
132 H31 -2.2792 -0.9191 -1.9798 H 1 LGD 0.3075
133 H32 -1.0424 -1.9436 7.4240 H 1 LGD 0.4025
134 H33 -4.2665 -0.6647 -2.9389 H 1 LGD 0.0579
135 H34 4.0270 -0.2019 -3.1052 H 1 LGD 0.1034
136 H35 -8.1489 -0.3856 -2.4571 H 1 LGD 0.0662
137 H36 6.5796 -3.3863 1.4459 H 1 LGD 0.0401
138 H37 3.9136 -1.2121 -0.3613 H 1 LGD 0.3051
139 H38 -6.1260 -0.2249 -3.7293 H 1 LGD 0.0765
140 H39 -8.8021 1.8283 -2.8941 H 1 LGD 0.4634
141 H40 7.4694 -2.1022 -0.4852 H 1 LGD 0.1404
142 H41 6.0859 -5.2207 0.2159 H 1 LGD 0.4328
143 H42 -3.9486 2.0129 -5.3225 H 1 LGD 0.1452
144 H43 -3.0340 -2.1617 -4.6786 H 1 LGD 0.1183
145 H44 -5.9281 2.6774 -2.9346 H 1 LGD 0.3395
146 H45 5.5637 -0.8527 1.4246 H 1 LGD 0.2951
147 H46 -3.1594 -2.5512 -7.1216 H 1 LGD 0.1481
148 H47 -5.7540 0.4185 -5.9198 H 1 LGD 0.3155
149 H48 -7.8701 2.1053 -7.1886 H 1 LGD 0.0870
150 H49 7.3150 2.3710 1.0882 H 1 LGD 0.1477
151 H50 5.1844 2.0928 -0.2907 H 1 LGD 0.1005
152 H51 4.4308 1.3101 1.0865 H 1 LGD 0.1005
153 H52 6.1898 2.2000 3.2186 H 1 LGD 0.4468
154 H53 -7.3429 3.5561 -8.8974 H 1 LGD 0.1587
155 H54 -3.2724 4.3191 -10.0413 H 1 LGD 0.1196
156 H55 -1.7654 3.0209 -9.2101 H 1 LGD 0.4147
157 H56 -4.9929 5.4807 -10.7545 H 1 LGD 0.4165
158 H57 -4.4581 -0.0938 -9.2939 H 1 LGD 0.4787
159 H58 8.2381 0.1196 2.8375 H 1 LGD 0.1066
160 H59 8.5557 1.8510 3.1106 H 1 LGD 0.1066
161 H60 7.7897 0.8723 4.3863 H 1 LGD 0.1066
162 H61 4.8301 3.4504 2.4391 H 1 LGD -0.0071
163 H62 3.1487 3.8552 -0.0990 H 1 LGD 0.0553
164 H63 2.6176 2.9385 1.3238 H 1 LGD 0.0553
165 H64 2.9355 4.6763 1.4637 H 1 LGD 0.0553
166 H65 6.7079 4.4395 1.1667 H 1 LGD 0.0553
167 H66 5.6702 4.6274 -0.2664 H 1 LGD 0.0553
168 H67 5.3377 5.5599 1.2088 H 1 LGD 0.0553
169 H68 3.7445 -2.7578 -3.3723 H 1 LGD 0.0844
170 H69 2.2087 -2.6332 -2.5201 H 1 LGD 0.0844
171 H70 4.0037 -1.1521 -5.4124 H 1 LGD 0.3294
172 H71 2.5657 -1.0422 -6.4071 H 1 LGD 0.3294
173 H72 -4.1137 -1.4509 4.1965 H 1 LGD 0.0493
174 H73 -4.7066 -3.0621 4.6221 H 1 LGD 0.0493
175 H74 -6.2041 -1.3801 5.1136 H 1 LGD 0.4277
176 H75 2.7550 0.3256 9.2463 H 1 LGD 0.4633
177 H76 5.8893 0.6078 2.9665 H 1 LGD 0.4468
@BOND
1 1 2 1
2 1 3 1
3 2 4 1
4 3 5 1
5 4 6 1
6 4 7 1
7 4 8 1
8 5 9 1
9 6 10 1
10 5 6 1
11 11 12 ar
12 11 13 ar
13 11 14 1
14 12 15 ar
15 12 16 1
16 13 17 ar
17 13 18 1
18 14 19 1
19 15 20 ar
20 16 21 1
21 18 22 1
22 19 23 1
23 19 24 1
24 20 25 1
25 21 26 ar
26 21 27 ar
27 22 28 ar
28 22 29 ar
29 23 30 1
30 24 31 1
31 25 32 1
32 25 33 1
33 26 34 ar
34 26 35 1
35 27 36 ar
36 28 37 ar
37 28 38 1
38 29 39 ar
39 30 40 1
40 30 41 1
41 32 42 am
42 32 43 2
43 33 44 am
44 34 45 ar
45 37 46 ar
46 40 47 1
47 42 48 1
48 44 49 1
49 44 50 2
50 45 51 1
51 46 52 1
52 48 53 1
53 48 54 1
54 49 55 1
55 51 56 1
56 51 57 1
57 52 58 1
58 52 59 1
59 53 60 ar
60 53 61 ar
61 54 62 am
62 55 63 am
63 56 64 1
64 58 65 1
65 60 66 ar
66 61 67 ar
67 63 68 2
68 64 69 am
69 64 70 2
70 65 71 am
71 66 72 1
72 66 73 ar
73 69 74 1
74 71 75 1
75 71 76 2
76 72 77 ar
77 72 78 ar
78 74 79 1
79 75 80 1
80 75 81 1
81 77 82 ar
82 78 83 ar
83 78 84 1
84 82 85 ar
85 85 86 1
86 17 20 ar
87 31 40 1
88 36 45 ar
89 39 46 ar
90 56 62 1
91 58 63 1
92 67 73 ar
93 74 77 1
94 83 85 ar
95 54 87 2
96 73 88 1
97 79 89 1
98 79 90 2
99 81 91 1
100 80 92 1
101 92 93 1
102 92 94 1
103 49 95 1
104 95 96 1
105 96 97 am
106 96 98 2
107 31 99 1
108 99 100 1
109 23 101 1
110 1 101 1
111 1 102 1
112 2 103 1
113 2 104 1
114 5 105 1
115 6 106 1
116 7 107 1
117 7 108 1
118 7 109 1
119 8 110 1
120 8 111 1
121 9 112 1
122 9 113 1
123 9 114 1
124 10 115 1
125 15 116 1
126 17 117 1
127 19 118 1
128 23 119 1
129 25 120 1
130 27 121 1
131 29 122 1
132 30 123 1
133 31 124 1
134 33 125 1
135 34 126 1
136 36 127 1
137 37 128 1
138 39 129 1
139 40 130 1
140 41 131 1
141 42 132 1
142 47 133 1
143 48 134 1
144 49 135 1
145 51 136 1
146 52 137 1
147 55 138 1
148 56 139 1
149 57 140 1
150 58 141 1
151 59 142 1
152 60 143 1
153 61 144 1
154 62 145 1
155 65 146 1
156 67 147 1
157 69 148 1
158 74 149 1
159 75 150 1
160 80 151 1
161 80 152 1
162 81 153 1
163 82 154 1
164 83 155 1
165 84 156 1
166 86 157 1
167 88 158 1
168 91 159 1
169 91 160 1
170 91 161 1
171 92 162 1
172 93 163 1
173 93 164 1
174 93 165 1
175 94 166 1
176 94 167 1
177 94 168 1
178 95 169 1
179 95 170 1
180 97 171 1
181 97 172 1
182 99 173 1
183 99 174 1
184 100 175 1
185 8 176 1
186 81 177 1