@COMMENT
LIGANDBOX_ID = D00926-05
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00926
NAME = Vancomycin_hydrochloride_(JP18/USP)_Vancoled_(TN)_Vancocin_(TN)
MOLECULAR_FORMULA = C66H75N9O24Cl2
MOLECULAR_WEIGHT = 1449.271
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 21
NUM_OF_ACCEPTOR = 24
NUM_OF_CHIRAL_ATOMS = 18
TPSA = 530.4900
HOMO = -6.5613
LUMO = -5.4826
mLOGS = -1.290
mLOGD = -1.898
mLOGPA = -8.186
@MOLECULE
D00926-05
177 186 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 0.5288 -0.1085 4.4904 C.3 1 LGD 0.3412
2 C2 0.7333 0.9097 3.3660 C.3 1 LGD -0.1396
3 O1 1.2063 0.4246 5.6416 O.3 1 LGD -0.4034
4 C3 2.2246 1.0064 2.9835 C.3 1 LGD 0.1398
5 C4 2.6500 0.4663 5.5560 C.3 1 LGD 0.1117
6 C5 3.1061 1.2478 4.2689 C.3 1 LGD 0.0992
7 C6 2.3950 2.1393 1.9409 C.3 1 LGD -0.1267
8 N1 2.6057 -0.2482 2.3087 N.4 1 LGD -0.8275
9 C7 3.2200 -0.9644 5.7062 C.3 1 LGD -0.1358
10 O2 4.4891 0.9848 4.0108 O.3 1 LGD -0.6654
11 C8 -1.5676 -1.8084 2.3485 C.ar 1 LGD 0.1217
12 C9 -2.2987 -0.7345 1.8098 C.ar 1 LGD 0.1737
13 C10 -0.3630 -2.2101 1.7270 C.ar 1 LGD 0.0765
14 O3 -2.0802 -2.4657 3.4495 O.3 1 LGD -0.3346
15 C11 -1.7949 -0.0026 0.7188 C.ar 1 LGD -0.1806
16 O4 -3.5388 -0.4259 2.3271 O.3 1 LGD -0.2421
17 C12 0.1223 -1.4708 0.6242 C.ar 1 LGD -0.2752
18 O5 0.3013 -3.3538 2.1498 O.3 1 LGD -0.2413
19 C13 -1.3411 -2.6388 4.6811 C.3 1 LGD 0.3484
20 C14 -0.5867 -0.3726 0.0968 C.ar 1 LGD -0.0760
21 C15 -4.5964 -0.1521 1.4886 C.ar 1 LGD 0.0707
22 C16 1.6401 -3.5588 1.8921 C.ar 1 LGD 0.1398
23 C17 -1.2875 -1.3305 5.5480 C.3 1 LGD 0.0368
24 O6 -1.9538 -3.6953 5.4684 O.3 1 LGD -0.3983
25 C18 -0.0740 0.4047 -1.1427 C.3 1 LGD 0.0843
26 C19 -5.1070 -1.1378 0.6190 C.ar 1 LGD 0.0021
27 C20 -5.1141 1.1501 1.4455 C.ar 1 LGD -0.1183
28 C21 2.0939 -3.9848 0.6281 C.ar 1 LGD 0.0097
29 C22 2.5676 -3.2412 2.8879 C.ar 1 LGD -0.2047
30 C23 -2.6325 -0.9780 6.2386 C.3 1 LGD 0.1368
31 C24 -3.2648 -3.4801 6.0686 C.3 1 LGD 0.0715
32 C25 -1.1596 0.6289 -2.2128 C.2 1 LGD 0.6596
33 N2 1.0475 -0.2954 -1.7926 N.am 1 LGD -0.5686
34 C26 -6.0883 -0.7983 -0.3267 C.ar 1 LGD -0.1133
35 Cl1 -4.5016 -2.7857 0.6570 Cl 1 LGD -0.0967
36 C27 -6.0899 1.4881 0.4947 C.ar 1 LGD -0.0734
37 C28 3.4658 -3.9325 0.3273 C.ar 1 LGD -0.0675
38 Cl2 0.9591 -4.5173 -0.6028 Cl 1 LGD 0.0004
39 C29 3.9386 -3.1805 2.5857 C.ar 1 LGD -0.1602
40 C30 -3.2116 -2.2131 6.9765 C.3 1 LGD 0.1109
41 O7 -3.5775 -0.4677 5.3005 O.3 1 LGD -0.5805
42 N3 -2.3055 -0.1520 -2.1686 N.am 1 LGD -0.5730
43 O8 -1.0264 1.4671 -3.0884 O.2 1 LGD -0.5000
44 C31 2.3762 0.0846 -1.6591 C.2 1 LGD 0.6472
45 C32 -6.5656 0.5225 -0.4211 C.ar 1 LGD -0.0486
46 C33 4.3944 -3.4691 1.2858 C.ar 1 LGD -0.1658
47 O9 -2.4012 -2.4951 8.1186 O.3 1 LGD -0.5814
48 C34 -3.5857 0.2281 -2.7846 C.3 1 LGD 0.1398
49 C35 3.4948 -0.8369 -2.1883 C.3 1 LGD 0.0663
50 O10 2.6466 1.1284 -1.0923 O.2 1 LGD -0.6410
51 C36 -7.4430 0.9173 -1.6208 C.3 1 LGD 0.1924
52 C37 5.8913 -3.3683 0.9611 C.3 1 LGD 0.2017
53 C38 -3.5434 0.0640 -4.3084 C.ar 1 LGD -0.1875
54 C39 -4.1331 1.6079 -2.3042 C.2 1 LGD 0.6551
55 N4 4.2538 -1.3428 -1.0315 N.am 1 LGD -0.5996
56 C40 -6.5401 1.0822 -2.8855 C.3 1 LGD -0.0078
57 O11 -8.1791 2.1125 -1.3529 O.3 1 LGD -0.6187
58 C41 6.3505 -2.1017 0.1624 C.3 1 LGD 0.0483
59 O12 6.3039 -4.5361 0.2563 O.3 1 LGD -0.5631
60 C42 -3.8164 1.1421 -5.1715 C.ar 1 LGD -0.0605
61 C43 -3.3525 -1.2147 -4.8619 C.ar 1 LGD -0.0814
62 N5 -5.4398 2.0084 -2.5572 N.am 1 LGD -0.5753
63 C44 5.5580 -1.8106 -1.1258 C.2 1 LGD 0.6582
64 C45 -7.2529 1.5606 -4.1680 C.2 1 LGD 0.6549
65 N6 6.4265 -0.8872 1.0050 N.am 1 LGD -0.6158
66 C46 -4.0567 0.9372 -6.5466 C.ar 1 LGD -0.0882
67 C47 -3.4781 -1.4169 -6.2453 C.ar 1 LGD -0.1754
68 O13 6.0755 -1.9286 -2.2232 O.2 1 LGD -0.5084
69 N7 -6.6906 1.1662 -5.3738 N.am 1 LGD -0.5330
70 O14 -8.2541 2.2575 -4.1526 O.2 1 LGD -0.6059
71 C48 7.3217 0.1404 0.7012 C.2 1 LGD 0.6343
72 C49 -4.5550 2.0846 -7.3669 C.ar 1 LGD -0.1272
73 C50 -3.8584 -0.3574 -7.0842 C.ar 1 LGD 0.2139
74 C51 -7.0788 1.6856 -6.6972 C.3 1 LGD -0.0059
75 C52 7.5163 1.3267 1.6650 C.3 1 LGD 0.0412
76 O15 7.9859 0.0744 -0.3179 O.2 1 LGD -0.4613
77 C53 -5.9387 2.4682 -7.3987 C.ar 1 LGD 0.0578
78 C54 -3.6170 2.8579 -8.0997 C.ar 1 LGD 0.1808
79 C55 -7.6105 0.5372 -7.5758 C.2 1 LGD 0.9387
80 C56 6.3786 2.3654 1.5290 C.3 1 LGD -0.1080
81 N8 7.6033 0.8831 3.0749 N.4 1 LGD -0.7447
82 C57 -6.3218 3.5904 -8.1589 C.ar 1 LGD -0.1907
83 C58 -4.0264 3.9713 -8.8462 C.ar 1 LGD -0.3462
84 O16 -2.2899 2.5377 -8.0860 O.3 1 LGD -0.4955
85 C59 -5.3765 4.3368 -8.8736 C.ar 1 LGD 0.1798
86 O17 -5.7728 5.4191 -9.6015 O.3 1 LGD -0.4917
87 O18 -3.4501 2.4117 -1.6946 O.2 1 LGD -0.6230
88 O19 -4.0680 -0.6051 -8.4090 O.3 1 LGD -0.4922
89 O20 -8.7186 0.1056 -7.3035 O.co2 1 LGD -0.8003
90 O21 -6.9012 0.1308 -8.4791 O.co2 1 LGD -0.8003
91 C60 8.8055 0.0559 3.3014 C.3 1 LGD 0.0804
92 C61 6.6257 3.6680 2.3485 C.3 1 LGD -0.0646
93 C62 5.3292 4.5040 2.4714 C.3 1 LGD -0.0962
94 C63 7.7635 4.5187 1.7312 C.3 1 LGD -0.0962
95 C64 2.9850 -2.0264 -3.0563 C.3 1 LGD -0.1872
96 C65 2.2417 -1.5677 -4.3128 C.2 1 LGD 0.6502
97 N9 2.9294 -0.9064 -5.3061 N.am 1 LGD -0.6781
98 O22 1.0519 -1.7688 -4.4698 O.2 1 LGD -0.5682
99 C66 -4.3935 -3.4930 4.9949 C.3 1 LGD 0.1218
100 O23 -5.6748 -3.4269 5.6163 O.3 1 LGD -0.5852
101 O24 -0.8777 -0.1928 4.7620 O.3 1 LGD -0.3771
102 H1 0.9252 -1.0919 4.2140 H 1 LGD 0.0134
103 H2 0.1335 0.6342 2.4960 H 1 LGD 0.1215
104 H3 0.3702 1.8912 3.6988 H 1 LGD 0.1215
105 H4 3.0100 1.0336 6.4238 H 1 LGD 0.1121
106 H5 3.0021 2.3104 4.5218 H 1 LGD 0.1050
107 H6 2.3277 3.1272 2.4122 H 1 LGD 0.0876
108 H7 3.3545 2.0708 1.4209 H 1 LGD 0.0876
109 H8 1.6104 2.0853 1.1759 H 1 LGD 0.0876
110 H9 3.5811 -0.2004 2.0561 H 1 LGD 0.4559
111 H10 2.4599 -1.0316 2.9278 H 1 LGD 0.4559
112 H11 4.1865 -0.9369 6.2246 H 1 LGD 0.0520
113 H12 2.5454 -1.6043 6.2899 H 1 LGD 0.0520
114 H13 3.3899 -1.4216 4.7310 H 1 LGD 0.0520
115 H14 4.9179 0.8683 4.8776 H 1 LGD 0.4324
116 H15 -2.3584 0.8462 0.3414 H 1 LGD 0.1986
117 H16 1.0532 -1.7602 0.1588 H 1 LGD 0.1203
118 H17 -0.3189 -2.9467 4.4404 H 1 LGD 0.0572
119 H18 -0.5516 -1.4942 6.3460 H 1 LGD 0.0703
120 H19 0.2388 1.4026 -0.8117 H 1 LGD 0.1092
121 H20 -4.7198 1.9130 2.1106 H 1 LGD 0.1514
122 H21 2.2084 -3.0063 3.8836 H 1 LGD 0.1532
123 H22 -2.4319 -0.1977 6.9843 H 1 LGD 0.0785
124 H23 -3.4720 -4.3345 6.7258 H 1 LGD 0.1152
125 H24 0.8418 -1.1220 -2.3371 H 1 LGD 0.3606
126 H25 -6.4371 -1.5511 -1.0283 H 1 LGD 0.1656
127 H26 -6.4242 2.5197 0.4341 H 1 LGD 0.1746
128 H27 3.8034 -4.2221 -0.6644 H 1 LGD 0.1908
129 H28 4.6466 -2.8954 3.3586 H 1 LGD 0.1275
130 H29 -4.2252 -1.9689 7.3189 H 1 LGD 0.1195
131 H30 -3.0825 -0.2477 4.4899 H 1 LGD 0.4313
132 H31 -2.3155 -0.9212 -1.5148 H 1 LGD 0.3039
133 H32 -1.6450 -3.0259 7.8119 H 1 LGD 0.4025
134 H33 -4.3037 -0.5128 -2.4165 H 1 LGD 0.0606
135 H34 4.1542 -0.2104 -2.8033 H 1 LGD 0.1111
136 H35 -8.1524 0.1027 -1.8153 H 1 LGD 0.0704
137 H36 6.4338 -3.3495 1.9150 H 1 LGD 0.0330
138 H37 3.8389 -1.2772 -0.1153 H 1 LGD 0.2704
139 H38 -6.1440 0.0908 -3.1280 H 1 LGD 0.0758
140 H39 -8.5706 2.3958 -2.2012 H 1 LGD 0.4641
141 H40 7.3727 -2.3248 -0.1712 H 1 LGD 0.1378
142 H41 6.0898 -5.3024 0.8171 H 1 LGD 0.4404
143 H42 -3.9508 2.1459 -4.7811 H 1 LGD 0.1435
144 H43 -3.1321 -2.0602 -4.2161 H 1 LGD 0.1160
145 H44 -5.6822 2.9565 -2.3080 H 1 LGD 0.3420
146 H45 5.8791 -0.8346 1.8503 H 1 LGD 0.2799
147 H46 -3.3353 -2.4108 -6.6598 H 1 LGD 0.1490
148 H47 -5.9000 0.5395 -5.3356 H 1 LGD 0.3144
149 H48 -7.9230 2.3742 -6.5712 H 1 LGD 0.0912
150 H49 8.4592 1.8028 1.3893 H 1 LGD 0.1529
151 H50 6.2431 2.6242 0.4704 H 1 LGD 0.0853
152 H51 5.4481 1.8957 1.8503 H 1 LGD 0.0853
153 H52 7.6544 1.7025 3.6663 H 1 LGD 0.4499
154 H53 -7.3673 3.8824 -8.2039 H 1 LGD 0.1591
155 H54 -3.2955 4.5528 -9.4014 H 1 LGD 0.1201
156 H55 -1.8157 3.1816 -8.6390 H 1 LGD 0.4148
157 H56 -4.9876 5.8021 -10.0286 H 1 LGD 0.4171
158 H57 -4.6730 0.0803 -8.7486 H 1 LGD 0.4844
159 H58 8.7563 -0.8439 2.6853 H 1 LGD 0.1124
160 H59 9.6973 0.6270 3.0356 H 1 LGD 0.1124
161 H60 8.8611 -0.2296 4.3536 H 1 LGD 0.1124
162 H61 6.9266 3.3964 3.3683 H 1 LGD 0.0070
163 H62 4.9222 4.7537 1.4833 H 1 LGD 0.0549
164 H63 4.5648 3.9511 3.0307 H 1 LGD 0.0549
165 H64 5.5189 5.4414 3.0103 H 1 LGD 0.0549
166 H65 8.7051 3.9572 1.6981 H 1 LGD 0.0549
167 H66 7.5119 4.8277 0.7084 H 1 LGD 0.0549
168 H67 7.9369 5.4251 2.3254 H 1 LGD 0.0549
169 H68 3.8320 -2.6433 -3.3803 H 1 LGD 0.0846
170 H69 2.3284 -2.6771 -2.4665 H 1 LGD 0.0846
171 H70 3.9192 -0.7339 -5.2112 H 1 LGD 0.3305
172 H71 2.4354 -0.6036 -6.1328 H 1 LGD 0.3305
173 H72 -4.2944 -2.6566 4.2966 H 1 LGD 0.0725
174 H73 -4.3152 -4.4203 4.4140 H 1 LGD 0.0725
175 H74 -5.8658 -2.4873 5.7861 H 1 LGD 0.4125
176 H75 2.0431 -0.3659 1.4777 H 1 LGD 0.4559
177 H76 6.7722 0.3644 3.3220 H 1 LGD 0.4499
@BOND
1 1 2 1
2 1 3 1
3 2 4 1
4 3 5 1
5 4 6 1
6 4 7 1
7 4 8 1
8 5 9 1
9 6 10 1
10 5 6 1
11 11 12 ar
12 11 13 ar
13 11 14 1
14 12 15 ar
15 12 16 1
16 13 17 ar
17 13 18 1
18 14 19 1
19 15 20 ar
20 16 21 1
21 18 22 1
22 19 23 1
23 19 24 1
24 20 25 1
25 21 26 ar
26 21 27 ar
27 22 28 ar
28 22 29 ar
29 23 30 1
30 24 31 1
31 25 32 1
32 25 33 1
33 26 34 ar
34 26 35 1
35 27 36 ar
36 28 37 ar
37 28 38 1
38 29 39 ar
39 30 40 1
40 30 41 1
41 32 42 am
42 32 43 2
43 33 44 am
44 34 45 ar
45 37 46 ar
46 40 47 1
47 42 48 1
48 44 49 1
49 44 50 2
50 45 51 1
51 46 52 1
52 48 53 1
53 48 54 1
54 49 55 1
55 51 56 1
56 51 57 1
57 52 58 1
58 52 59 1
59 53 60 ar
60 53 61 ar
61 54 62 am
62 55 63 am
63 56 64 1
64 58 65 1
65 60 66 ar
66 61 67 ar
67 63 68 2
68 64 69 am
69 64 70 2
70 65 71 am
71 66 72 1
72 66 73 ar
73 69 74 1
74 71 75 1
75 71 76 2
76 72 77 ar
77 72 78 ar
78 74 79 1
79 75 80 1
80 75 81 1
81 77 82 ar
82 78 83 ar
83 78 84 1
84 82 85 ar
85 85 86 1
86 17 20 ar
87 31 40 1
88 36 45 ar
89 39 46 ar
90 56 62 1
91 58 63 1
92 67 73 ar
93 74 77 1
94 83 85 ar
95 54 87 2
96 73 88 1
97 79 89 1
98 79 90 2
99 81 91 1
100 80 92 1
101 92 93 1
102 92 94 1
103 49 95 1
104 95 96 1
105 96 97 am
106 96 98 2
107 31 99 1
108 99 100 1
109 23 101 1
110 1 101 1
111 1 102 1
112 2 103 1
113 2 104 1
114 5 105 1
115 6 106 1
116 7 107 1
117 7 108 1
118 7 109 1
119 8 110 1
120 8 111 1
121 9 112 1
122 9 113 1
123 9 114 1
124 10 115 1
125 15 116 1
126 17 117 1
127 19 118 1
128 23 119 1
129 25 120 1
130 27 121 1
131 29 122 1
132 30 123 1
133 31 124 1
134 33 125 1
135 34 126 1
136 36 127 1
137 37 128 1
138 39 129 1
139 40 130 1
140 41 131 1
141 42 132 1
142 47 133 1
143 48 134 1
144 49 135 1
145 51 136 1
146 52 137 1
147 55 138 1
148 56 139 1
149 57 140 1
150 58 141 1
151 59 142 1
152 60 143 1
153 61 144 1
154 62 145 1
155 65 146 1
156 67 147 1
157 69 148 1
158 74 149 1
159 75 150 1
160 80 151 1
161 80 152 1
162 81 153 1
163 82 154 1
164 83 155 1
165 84 156 1
166 86 157 1
167 88 158 1
168 91 159 1
169 91 160 1
170 91 161 1
171 92 162 1
172 93 163 1
173 93 164 1
174 93 165 1
175 94 166 1
176 94 167 1
177 94 168 1
178 95 169 1
179 95 170 1
180 97 171 1
181 97 172 1
182 99 173 1
183 99 174 1
184 100 175 1
185 8 176 1
186 81 177 1