@COMMENT
LIGANDBOX_ID = D00926-07
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00926
NAME = Vancomycin_hydrochloride_(JP18/USP)_Vancoled_(TN)_Vancocin_(TN)
MOLECULAR_FORMULA = C66H75N9O24Cl2
MOLECULAR_WEIGHT = 1449.271
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 21
NUM_OF_ACCEPTOR = 24
NUM_OF_CHIRAL_ATOMS = 18
TPSA = 530.4900
HOMO = -6.5613
LUMO = -5.4826
mLOGS = -1.290
mLOGD = -1.898
mLOGPA = -8.186
@MOLECULE
D00926-07
177 186 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 1.5005 -0.4587 5.8822 C.3 1 LGD 0.3459
2 C2 2.5617 -1.0848 6.8124 C.3 1 LGD -0.1373
3 O1 2.1572 -0.0635 4.6596 O.3 1 LGD -0.4278
4 C3 3.7464 -0.1158 7.0812 C.3 1 LGD 0.1004
5 C4 3.1571 0.9694 4.7664 C.3 1 LGD 0.1566
6 C5 4.2815 0.4768 5.7314 C.3 1 LGD 0.0826
7 C6 4.8734 -0.8585 7.8448 C.3 1 LGD -0.1360
8 N1 3.2696 0.9661 7.9633 N.4 1 LGD -0.8215
9 C7 2.4780 2.3237 5.1162 C.3 1 LGD -0.1259
10 O2 5.2373 1.5162 5.9580 O.3 1 LGD -0.6143
11 C8 -1.5790 -1.5872 1.9019 C.ar 1 LGD 0.0880
12 C9 -2.3694 -0.6039 1.2820 C.ar 1 LGD 0.1507
13 C10 -0.3261 -1.9222 1.3339 C.ar 1 LGD 0.0956
14 O3 -2.0610 -2.1776 3.0615 O.3 1 LGD -0.3393
15 C11 -1.8831 0.1114 0.1717 C.ar 1 LGD -0.1694
16 O4 -3.6457 -0.3645 1.7473 O.3 1 LGD -0.2557
17 C12 0.1294 -1.2253 0.1935 C.ar 1 LGD -0.1926
18 O5 0.4229 -2.9639 1.8541 O.3 1 LGD -0.2648
19 C13 -1.2221 -2.4226 4.2157 C.3 1 LGD 0.3687
20 C14 -0.6359 -0.2016 -0.4042 C.ar 1 LGD -0.0581
21 C15 -4.6929 -0.2123 0.8645 C.ar 1 LGD 0.0843
22 C16 1.7481 -3.1716 1.5450 C.ar 1 LGD 0.1459
23 C17 -0.5444 -1.0966 4.6856 C.3 1 LGD 0.0294
24 O6 -2.0162 -2.9781 5.2931 O.3 1 LGD -0.3786
25 C18 -0.1427 0.5647 -1.6629 C.3 1 LGD 0.0993
26 C19 -5.0774 -1.2612 0.0025 C.ar 1 LGD -0.0007
27 C20 -5.3315 1.0325 0.7724 C.ar 1 LGD -0.1217
28 C21 2.1196 -3.8381 0.3624 C.ar 1 LGD 0.0208
29 C22 2.7354 -2.6698 2.4027 C.ar 1 LGD -0.1403
30 C23 -1.5402 -0.1311 5.4069 C.3 1 LGD 0.0999
31 C24 -3.0575 -2.1328 5.8368 C.3 1 LGD 0.1063
32 C25 -1.2279 0.7264 -2.7465 C.2 1 LGD 0.6576
33 N2 1.0135 -0.0882 -2.3012 N.am 1 LGD -0.5687
34 C26 -6.0569 -1.0390 -0.9789 C.ar 1 LGD -0.1154
35 Cl1 -4.3195 -2.8429 0.0933 Cl 1 LGD -0.0983
36 C27 -6.3048 1.2534 -0.2148 C.ar 1 LGD -0.0747
37 C28 3.4753 -3.9287 0.0069 C.ar 1 LGD -0.0802
38 Cl2 0.9002 -4.5116 -0.7063 Cl 1 LGD -0.0222
39 C29 4.0900 -2.7751 2.0565 C.ar 1 LGD -0.1634
40 C30 -2.3918 -0.8760 6.4670 C.3 1 LGD 0.0886
41 O7 -2.4059 0.4753 4.4478 O.3 1 LGD -0.5798
42 N3 -2.3113 -0.1410 -2.7379 N.am 1 LGD -0.5754
43 O8 -1.1424 1.5854 -3.6080 O.2 1 LGD -0.5160
44 C31 2.3240 0.1009 -1.8818 C.2 1 LGD 0.6580
45 C32 -6.6573 0.2259 -1.1187 C.ar 1 LGD -0.0553
46 C33 4.4730 -3.3747 0.8401 C.ar 1 LGD -0.1461
47 O9 -1.5680 -1.2430 7.5762 O.3 1 LGD -0.6053
48 C34 -3.5948 0.1291 -3.4064 C.3 1 LGD 0.1403
49 C35 3.4535 -0.7885 -2.4590 C.3 1 LGD 0.0696
50 O10 2.5526 0.9320 -1.0182 O.2 1 LGD -0.6489
51 C36 -7.5337 0.5049 -2.3509 C.3 1 LGD 0.1942
52 C37 5.9533 -3.3669 0.4290 C.3 1 LGD 0.1977
53 C38 -3.4867 -0.0403 -4.9270 C.ar 1 LGD -0.1830
54 C39 -4.2760 1.4606 -2.9634 C.2 1 LGD 0.6533
55 N4 4.2986 -1.2325 -1.3400 N.am 1 LGD -0.5973
56 C40 -6.6160 0.7235 -3.5972 C.3 1 LGD -0.0067
57 O11 -8.3870 1.6307 -2.1355 O.3 1 LGD -0.6209
58 C41 6.4051 -2.0199 -0.2122 C.3 1 LGD 0.0637
59 O12 6.2541 -4.4461 -0.4530 O.3 1 LGD -0.5656
60 C42 -3.7447 1.0289 -5.8071 C.ar 1 LGD -0.0587
61 C43 -3.2616 -1.3208 -5.4633 C.ar 1 LGD -0.0792
62 N5 -5.6040 1.7438 -3.2617 N.am 1 LGD -0.5793
63 C44 5.6152 -1.6515 -1.4820 C.2 1 LGD 0.6503
64 C45 -7.3303 1.1261 -4.9045 C.2 1 LGD 0.6558
65 N6 6.2506 -0.9395 0.7744 N.am 1 LGD -0.6030
66 C46 -3.9454 0.8059 -7.1880 C.ar 1 LGD -0.0955
67 C47 -3.3398 -1.5362 -6.8482 C.ar 1 LGD -0.1750
68 O13 6.1292 -1.6749 -2.5873 O.2 1 LGD -0.5337
69 N7 -6.5980 0.9736 -6.0713 N.am 1 LGD -0.5425
70 O14 -8.4687 1.5630 -4.9410 O.2 1 LGD -0.6015
71 C48 6.9002 0.2789 0.6588 C.2 1 LGD 0.6340
72 C49 -4.4648 1.9207 -8.0413 C.ar 1 LGD -0.1316
73 C50 -3.7084 -0.4893 -7.7071 C.ar 1 LGD 0.2107
74 C51 -6.9946 1.4749 -7.3968 C.3 1 LGD -0.0018
75 C52 6.4204 1.4427 1.5370 C.3 1 LGD 0.0302
76 O15 7.8270 0.4082 -0.1209 O.2 1 LGD -0.4796
77 C53 -5.8604 2.2607 -8.1089 C.ar 1 LGD 0.0664
78 C54 -3.5402 2.6865 -8.7990 C.ar 1 LGD 0.1781
79 C55 -7.5218 0.3125 -8.2603 C.2 1 LGD 0.9362
80 C56 4.9735 1.8397 1.1490 C.3 1 LGD -0.1133
81 N8 6.4601 1.0858 2.9751 N.4 1 LGD -0.7445
82 C57 -6.2631 3.3389 -8.9214 C.ar 1 LGD -0.1917
83 C58 -3.9710 3.7532 -9.5996 C.ar 1 LGD -0.3481
84 O16 -2.2060 2.3990 -8.7644 O.3 1 LGD -0.4955
85 C59 -5.3300 4.0791 -9.6581 C.ar 1 LGD 0.1797
86 O17 -5.7473 5.1137 -10.4416 O.3 1 LGD -0.4930
87 O18 -3.6850 2.3297 -2.3476 O.2 1 LGD -0.6145
88 O19 -3.8671 -0.7474 -9.0373 O.3 1 LGD -0.4821
89 O20 -8.6093 -0.1478 -7.9593 O.co2 1 LGD -0.7999
90 O21 -6.8252 -0.0761 -9.1830 O.co2 1 LGD -0.7999
91 C60 7.8457 0.8398 3.4240 C.3 1 LGD 0.0848
92 C61 4.4722 3.1320 1.8499 C.3 1 LGD -0.0661
93 C62 2.9659 3.3464 1.5662 C.3 1 LGD -0.0969
94 C63 5.2915 4.3744 1.4208 C.3 1 LGD -0.0969
95 C64 2.9419 -2.0496 -3.2181 C.3 1 LGD -0.1854
96 C65 2.2818 -1.7096 -4.5551 C.2 1 LGD 0.6508
97 N9 3.0541 -1.2238 -5.5865 N.am 1 LGD -0.6805
98 O22 1.0888 -1.8554 -4.7459 O.2 1 LGD -0.5776
99 C66 -3.8643 -2.9515 6.8763 C.3 1 LGD 0.1558
100 O23 -4.5511 -4.0302 6.2469 O.3 1 LGD -0.5848
101 O24 0.5273 -1.4765 5.5798 O.3 1 LGD -0.3882
102 H1 1.0198 0.3992 6.3632 H 1 LGD 0.0428
103 H2 2.0904 -1.3803 7.7588 H 1 LGD 0.1125
104 H3 2.9383 -2.0054 6.3469 H 1 LGD 0.1125
105 H4 3.6136 1.0901 3.7775 H 1 LGD 0.0863
106 H5 4.7870 -0.3442 5.2066 H 1 LGD 0.0625
107 H6 5.2947 -1.6664 7.2326 H 1 LGD 0.0828
108 H7 5.6904 -0.1779 8.1153 H 1 LGD 0.0828
109 H8 4.4904 -1.3059 8.7712 H 1 LGD 0.0828
110 H9 4.0138 1.6339 8.1076 H 1 LGD 0.4643
111 H10 2.4854 1.4357 7.5365 H 1 LGD 0.4643
112 H11 3.2064 3.1431 5.0816 H 1 LGD 0.0643
113 H12 1.6913 2.5505 4.3858 H 1 LGD 0.0643
114 H13 2.0172 2.3259 6.1089 H 1 LGD 0.0643
115 H14 5.9441 1.1495 6.5187 H 1 LGD 0.4280
116 H15 -2.4930 0.9009 -0.2585 H 1 LGD 0.1902
117 H16 1.0874 -1.4901 -0.2323 H 1 LGD 0.1333
118 H17 -0.4509 -3.1542 3.9584 H 1 LGD 0.1144
119 H18 -0.1196 -0.5848 3.8134 H 1 LGD 0.0807
120 H19 0.1366 1.5803 -1.3541 H 1 LGD 0.1111
121 H20 -5.0337 1.8446 1.4296 H 1 LGD 0.1510
122 H21 2.4483 -2.1834 3.3278 H 1 LGD 0.1476
123 H22 -0.9814 0.6665 5.9102 H 1 LGD 0.0549
124 H23 -3.7433 -1.8206 5.0385 H 1 LGD 0.0960
125 H24 0.8382 -0.7493 -3.0460 H 1 LGD 0.3612
126 H25 -6.3095 -1.8372 -1.6716 H 1 LGD 0.1616
127 H26 -6.7349 2.2461 -0.3108 H 1 LGD 0.1709
128 H27 3.7414 -4.4002 -0.9351 H 1 LGD 0.1820
129 H28 4.8416 -2.3642 2.7246 H 1 LGD 0.0934
130 H29 -3.1818 -0.1989 6.8173 H 1 LGD 0.1119
131 H30 -2.6459 -0.2054 3.7918 H 1 LGD 0.4446
132 H31 -2.2786 -0.9131 -2.0883 H 1 LGD 0.3080
133 H32 -0.8779 -1.8348 7.2255 H 1 LGD 0.4094
134 H33 -4.2624 -0.6661 -3.0572 H 1 LGD 0.0594
135 H34 4.0450 -0.1659 -3.1425 H 1 LGD 0.1045
136 H35 -8.1574 -0.3782 -2.5401 H 1 LGD 0.0670
137 H36 6.5465 -3.5026 1.3425 H 1 LGD 0.0391
138 H37 3.9099 -1.2055 -0.4085 H 1 LGD 0.3050
139 H38 -6.1325 -0.2341 -3.8162 H 1 LGD 0.0770
140 H39 -8.8246 1.8153 -2.9884 H 1 LGD 0.4624
141 H40 7.4625 -2.1089 -0.4938 H 1 LGD 0.1381
142 H41 6.0728 -5.2718 0.0294 H 1 LGD 0.4331
143 H42 -3.9129 2.0313 -5.4250 H 1 LGD 0.1457
144 H43 -3.0536 -2.1584 -4.8032 H 1 LGD 0.1189
145 H44 -5.9317 2.6721 -3.0377 H 1 LGD 0.3389
146 H45 5.5224 -1.0305 1.4665 H 1 LGD 0.2964
147 H46 -3.1706 -2.5313 -7.2497 H 1 LGD 0.1482
148 H47 -5.6958 0.5295 -5.9949 H 1 LGD 0.3148
149 H48 -7.8399 2.1624 -7.2685 H 1 LGD 0.0838
150 H49 7.0919 2.2837 1.3545 H 1 LGD 0.1490
151 H50 4.9231 1.9833 0.0613 H 1 LGD 0.1022
152 H51 4.2940 1.0089 1.3810 H 1 LGD 0.1022
153 H52 6.0689 1.8473 3.5154 H 1 LGD 0.4455
154 H53 -7.3160 3.5975 -8.9938 H 1 LGD 0.1586
155 H54 -3.2501 4.3272 -10.1753 H 1 LGD 0.1194
156 H55 -1.7439 3.0277 -9.3445 H 1 LGD 0.4150
157 H56 -4.9689 5.4937 -10.8836 H 1 LGD 0.4164
158 H57 -4.3357 0.0086 -9.4347 H 1 LGD 0.4717
159 H58 8.2741 0.0080 2.8609 H 1 LGD 0.1071
160 H59 8.4495 1.7345 3.2598 H 1 LGD 0.1071
161 H60 7.8480 0.5926 4.4871 H 1 LGD 0.1071
162 H61 4.5917 3.0133 2.9336 H 1 LGD -0.0122
163 H62 2.7866 3.5079 0.4954 H 1 LGD 0.0560
164 H63 2.3805 2.4726 1.8796 H 1 LGD 0.0560
165 H64 2.5867 4.2191 2.1128 H 1 LGD 0.0560
166 H65 6.3430 4.2781 1.7181 H 1 LGD 0.0560
167 H66 5.2534 4.5142 0.3328 H 1 LGD 0.0560
168 H67 4.8953 5.2819 1.8939 H 1 LGD 0.0560
169 H68 3.7813 -2.7233 -3.4313 H 1 LGD 0.0840
170 H69 2.2361 -2.6122 -2.5947 H 1 LGD 0.0840
171 H70 4.0483 -1.1024 -5.4620 H 1 LGD 0.3295
172 H71 2.6185 -1.0003 -6.4692 H 1 LGD 0.3295
173 H72 -3.1854 -3.3422 7.6451 H 1 LGD 0.0354
174 H73 -4.5868 -2.2912 7.3724 H 1 LGD 0.0354
175 H74 -5.0313 -4.5141 6.9416 H 1 LGD 0.4156
176 H75 2.9845 0.5818 8.8530 H 1 LGD 0.4643
177 H76 5.9014 0.2597 3.1349 H 1 LGD 0.4455
@BOND
1 1 2 1
2 1 3 1
3 2 4 1
4 3 5 1
5 4 6 1
6 4 7 1
7 4 8 1
8 5 9 1
9 6 10 1
10 5 6 1
11 11 12 ar
12 11 13 ar
13 11 14 1
14 12 15 ar
15 12 16 1
16 13 17 ar
17 13 18 1
18 14 19 1
19 15 20 ar
20 16 21 1
21 18 22 1
22 19 23 1
23 19 24 1
24 20 25 1
25 21 26 ar
26 21 27 ar
27 22 28 ar
28 22 29 ar
29 23 30 1
30 24 31 1
31 25 32 1
32 25 33 1
33 26 34 ar
34 26 35 1
35 27 36 ar
36 28 37 ar
37 28 38 1
38 29 39 ar
39 30 40 1
40 30 41 1
41 32 42 am
42 32 43 2
43 33 44 am
44 34 45 ar
45 37 46 ar
46 40 47 1
47 42 48 1
48 44 49 1
49 44 50 2
50 45 51 1
51 46 52 1
52 48 53 1
53 48 54 1
54 49 55 1
55 51 56 1
56 51 57 1
57 52 58 1
58 52 59 1
59 53 60 ar
60 53 61 ar
61 54 62 am
62 55 63 am
63 56 64 1
64 58 65 1
65 60 66 ar
66 61 67 ar
67 63 68 2
68 64 69 am
69 64 70 2
70 65 71 am
71 66 72 1
72 66 73 ar
73 69 74 1
74 71 75 1
75 71 76 2
76 72 77 ar
77 72 78 ar
78 74 79 1
79 75 80 1
80 75 81 1
81 77 82 ar
82 78 83 ar
83 78 84 1
84 82 85 ar
85 85 86 1
86 17 20 ar
87 31 40 1
88 36 45 ar
89 39 46 ar
90 56 62 1
91 58 63 1
92 67 73 ar
93 74 77 1
94 83 85 ar
95 54 87 2
96 73 88 1
97 79 89 1
98 79 90 2
99 81 91 1
100 80 92 1
101 92 93 1
102 92 94 1
103 49 95 1
104 95 96 1
105 96 97 am
106 96 98 2
107 31 99 1
108 99 100 1
109 23 101 1
110 1 101 1
111 1 102 1
112 2 103 1
113 2 104 1
114 5 105 1
115 6 106 1
116 7 107 1
117 7 108 1
118 7 109 1
119 8 110 1
120 8 111 1
121 9 112 1
122 9 113 1
123 9 114 1
124 10 115 1
125 15 116 1
126 17 117 1
127 19 118 1
128 23 119 1
129 25 120 1
130 27 121 1
131 29 122 1
132 30 123 1
133 31 124 1
134 33 125 1
135 34 126 1
136 36 127 1
137 37 128 1
138 39 129 1
139 40 130 1
140 41 131 1
141 42 132 1
142 47 133 1
143 48 134 1
144 49 135 1
145 51 136 1
146 52 137 1
147 55 138 1
148 56 139 1
149 57 140 1
150 58 141 1
151 59 142 1
152 60 143 1
153 61 144 1
154 62 145 1
155 65 146 1
156 67 147 1
157 69 148 1
158 74 149 1
159 75 150 1
160 80 151 1
161 80 152 1
162 81 153 1
163 82 154 1
164 83 155 1
165 84 156 1
166 86 157 1
167 88 158 1
168 91 159 1
169 91 160 1
170 91 161 1
171 92 162 1
172 93 163 1
173 93 164 1
174 93 165 1
175 94 166 1
176 94 167 1
177 94 168 1
178 95 169 1
179 95 170 1
180 97 171 1
181 97 172 1
182 99 173 1
183 99 174 1
184 100 175 1
185 8 176 1
186 81 177 1