@COMMENT
LIGANDBOX_ID = D00926-08
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D00926
NAME = Vancomycin_hydrochloride_(JP18/USP)_Vancoled_(TN)_Vancocin_(TN)
MOLECULAR_FORMULA = C66H75N9O24Cl2
MOLECULAR_WEIGHT = 1449.271
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 21
NUM_OF_ACCEPTOR = 24
NUM_OF_CHIRAL_ATOMS = 18
TPSA = 530.4900
HOMO = -6.5613
LUMO = -5.4826
mLOGS = -1.290
mLOGD = -1.898
mLOGPA = -8.186
@MOLECULE
D00926-08
177 186 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 1.5107 -0.5071 5.9479 C.3 1 LGD 0.3460
2 C2 2.5724 -1.1358 6.8779 C.3 1 LGD -0.1360
3 O1 2.1696 -0.1174 4.7241 O.3 1 LGD -0.4294
4 C3 3.7640 -0.1720 7.1423 C.3 1 LGD 0.1000
5 C4 3.1746 0.9118 4.8272 C.3 1 LGD 0.1568
6 C5 4.2989 0.4167 5.7908 C.3 1 LGD 0.0827
7 C6 4.8909 -0.9181 7.9033 C.3 1 LGD -0.1361
8 N1 3.2965 0.9136 8.0248 N.4 1 LGD -0.8215
9 C7 2.5029 2.2698 5.1764 C.3 1 LGD -0.1258
10 O2 5.2588 1.4535 6.0143 O.3 1 LGD -0.6150
11 C8 -1.5236 -1.6287 1.9310 C.ar 1 LGD 0.0883
12 C9 -2.3119 -0.6400 1.3190 C.ar 1 LGD 0.1493
13 C10 -0.2725 -1.9638 1.3656 C.ar 1 LGD 0.0971
14 O3 -2.0114 -2.2354 3.0759 O.3 1 LGD -0.3500
15 C11 -1.8246 0.0797 0.2135 C.ar 1 LGD -0.1674
16 O4 -3.5863 -0.3994 1.7880 O.3 1 LGD -0.2614
17 C12 0.1847 -1.2652 0.2273 C.ar 1 LGD -0.1907
18 O5 0.4689 -3.0100 1.8863 O.3 1 LGD -0.2642
19 C13 -1.1984 -2.4685 4.2483 C.3 1 LGD 0.3722
20 C14 -0.5796 -0.2367 -0.3655 C.ar 1 LGD -0.0577
21 C15 -4.6396 -0.2529 0.9128 C.ar 1 LGD 0.0797
22 C16 1.7946 -3.2193 1.5852 C.ar 1 LGD 0.1445
23 C17 -0.5294 -1.1429 4.7343 C.3 1 LGD 0.0389
24 O6 -2.0040 -3.0472 5.3109 O.3 1 LGD -0.3848
25 C18 -0.0928 0.5298 -1.6254 C.3 1 LGD 0.0995
26 C19 -5.0298 -1.3063 0.0593 C.ar 1 LGD -0.0044
27 C20 -5.2821 0.9898 0.8227 C.ar 1 LGD -0.1215
28 C21 2.1703 -3.8890 0.4062 C.ar 1 LGD 0.0206
29 C22 2.7776 -2.7168 2.4474 C.ar 1 LGD -0.1397
30 C23 -1.5299 -0.1834 5.4437 C.3 1 LGD 0.1004
31 C24 -3.0313 -2.2491 5.9582 C.3 1 LGD 0.1125
32 C25 -1.1844 0.6849 -2.7043 C.2 1 LGD 0.6577
33 N2 1.0641 -0.1201 -2.2649 N.am 1 LGD -0.5692
34 C26 -6.0157 -1.0889 -0.9167 C.ar 1 LGD -0.1152
35 Cl1 -4.2717 -2.8875 0.1549 Cl 1 LGD -0.1013
36 C27 -6.2625 1.2058 -0.1581 C.ar 1 LGD -0.0738
37 C28 3.5273 -3.9815 0.0571 C.ar 1 LGD -0.0801
38 Cl2 0.9546 -4.5641 -0.6657 Cl 1 LGD -0.0236
39 C29 4.1335 -2.8246 2.1080 C.ar 1 LGD -0.1630
40 C30 -2.3571 -0.9522 6.5098 C.3 1 LGD 0.1071
41 O7 -2.3804 0.4301 4.4750 O.3 1 LGD -0.5822
42 N3 -2.2663 -0.1848 -2.6866 N.am 1 LGD -0.5758
43 O8 -1.1061 1.5417 -3.5686 O.2 1 LGD -0.5149
44 C31 2.3729 0.0595 -1.8358 C.2 1 LGD 0.6580
45 C32 -6.6175 0.1753 -1.0576 C.ar 1 LGD -0.0542
46 C33 4.5211 -3.4262 0.8940 C.ar 1 LGD -0.1457
47 O9 -3.2975 -0.0851 7.1428 O.3 1 LGD -0.5835
48 C34 -3.5544 0.0797 -3.3486 C.3 1 LGD 0.1408
49 C35 3.5000 -0.8371 -2.4065 C.3 1 LGD 0.0694
50 O10 2.6007 0.8873 -0.9688 O.2 1 LGD -0.6478
51 C36 -7.4958 0.4516 -2.2887 C.3 1 LGD 0.1939
52 C37 6.0018 -3.4156 0.4873 C.3 1 LGD 0.1975
53 C38 -3.4510 -0.0911 -4.8690 C.ar 1 LGD -0.1837
54 C39 -4.2376 1.4101 -2.9049 C.2 1 LGD 0.6528
55 N4 4.3431 -1.2796 -1.2851 N.am 1 LGD -0.5974
56 C40 -6.5785 0.6705 -3.5356 C.3 1 LGD -0.0064
57 O11 -8.3503 1.5764 -2.0732 O.3 1 LGD -0.6210
58 C41 6.4496 -2.0677 -0.1545 C.3 1 LGD 0.0640
59 O12 6.3076 -4.4951 -0.3927 O.3 1 LGD -0.5655
60 C42 -3.7086 0.9781 -5.7488 C.ar 1 LGD -0.0585
61 C43 -3.2277 -1.3720 -5.4049 C.ar 1 LGD -0.0793
62 N5 -5.5666 1.6915 -3.2012 N.am 1 LGD -0.5797
63 C44 5.6591 -1.7021 -1.4252 C.2 1 LGD 0.6503
64 C45 -7.2942 1.0726 -4.8423 C.2 1 LGD 0.6556
65 N6 6.2912 -0.9878 0.8320 N.am 1 LGD -0.6034
66 C46 -3.9107 0.7549 -7.1293 C.ar 1 LGD -0.0952
67 C47 -3.3069 -1.5877 -6.7897 C.ar 1 LGD -0.1749
68 O13 6.1726 -1.7305 -2.5306 O.2 1 LGD -0.5335
69 N7 -6.5615 0.9239 -6.0093 N.am 1 LGD -0.5421
70 O14 -8.4340 1.5062 -4.8783 O.2 1 LGD -0.6012
71 C48 6.9390 0.2317 0.7186 C.2 1 LGD 0.6342
72 C49 -4.4303 1.8699 -7.9818 C.ar 1 LGD -0.1322
73 C50 -3.6749 -0.5405 -7.6485 C.ar 1 LGD 0.2111
74 C51 -6.9596 1.4253 -7.3343 C.3 1 LGD -0.0018
75 C52 6.4571 1.3933 1.5987 C.3 1 LGD 0.0302
76 O15 7.8657 0.3636 -0.0607 O.2 1 LGD -0.4798
77 C53 -5.8258 2.2106 -8.0479 C.ar 1 LGD 0.0664
78 C54 -3.5057 2.6358 -8.7395 C.ar 1 LGD 0.1782
79 C55 -7.4884 0.2630 -8.1969 C.2 1 LGD 0.9360
80 C56 5.0099 1.7891 1.2107 C.3 1 LGD -0.1131
81 N8 6.4964 1.0344 3.0363 N.4 1 LGD -0.7443
82 C57 -6.2286 3.2891 -8.8598 C.ar 1 LGD -0.1916
83 C58 -3.9367 3.7029 -9.5393 C.ar 1 LGD -0.3479
84 O16 -2.1716 2.3480 -8.7054 O.3 1 LGD -0.4956
85 C59 -5.2956 4.0292 -9.5969 C.ar 1 LGD 0.1800
86 O17 -5.7130 5.0642 -10.3799 O.3 1 LGD -0.4928
87 O18 -3.6469 2.2801 -2.2902 O.2 1 LGD -0.6140
88 O19 -3.8336 -0.7982 -8.9788 O.3 1 LGD -0.4814
89 O20 -8.5745 -0.1987 -7.8924 O.co2 1 LGD -0.7997
90 O21 -6.7947 -0.1242 -9.1222 O.co2 1 LGD -0.7997
91 C60 7.8818 0.7881 3.4855 C.3 1 LGD 0.0847
92 C61 4.5074 3.0803 1.9127 C.3 1 LGD -0.0662
93 C62 3.0011 3.2940 1.6286 C.3 1 LGD -0.0969
94 C63 5.3260 4.3236 1.4845 C.3 1 LGD -0.0969
95 C64 2.9837 -2.0999 -3.1599 C.3 1 LGD -0.1854
96 C65 2.3233 -1.7640 -4.4979 C.2 1 LGD 0.6508
97 N9 3.0943 -1.2764 -5.5294 N.am 1 LGD -0.6802
98 O22 1.1307 -1.9133 -4.6890 O.2 1 LGD -0.5783
99 C66 -4.2623 -2.0774 5.0138 C.3 1 LGD 0.1082
100 O23 -5.3745 -1.5200 5.7101 O.3 1 LGD -0.6170
101 O24 0.5283 -1.5198 5.6478 O.3 1 LGD -0.3804
102 H1 1.0356 0.3550 6.4272 H 1 LGD 0.0408
103 H2 2.1024 -1.4279 7.8260 H 1 LGD 0.1121
104 H3 2.9438 -2.0590 6.4132 H 1 LGD 0.1121
105 H4 3.6300 1.0292 3.8373 H 1 LGD 0.0856
106 H5 4.8010 -0.4066 5.2663 H 1 LGD 0.0624
107 H6 5.3089 -1.7271 7.2902 H 1 LGD 0.0825
108 H7 5.7106 -0.2396 8.1716 H 1 LGD 0.0825
109 H8 4.5094 -1.3641 8.8310 H 1 LGD 0.0825
110 H9 4.0451 1.5771 8.1657 H 1 LGD 0.4642
111 H10 2.5137 1.3874 7.6002 H 1 LGD 0.4642
112 H11 3.2349 3.0858 5.1377 H 1 LGD 0.0643
113 H12 1.7149 2.4990 4.4481 H 1 LGD 0.0643
114 H13 2.0456 2.2763 6.1707 H 1 LGD 0.0643
115 H14 5.9637 1.0867 6.5772 H 1 LGD 0.4276
116 H15 -2.4332 0.8724 -0.2124 H 1 LGD 0.1906
117 H16 1.1405 -1.5343 -0.2007 H 1 LGD 0.1340
118 H17 -0.4145 -3.1900 4.0003 H 1 LGD 0.1116
119 H18 -0.0925 -0.6285 3.8696 H 1 LGD 0.0767
120 H19 0.1837 1.5467 -1.3187 H 1 LGD 0.1116
121 H20 -4.9816 1.8042 1.4758 H 1 LGD 0.1533
122 H21 2.4863 -2.2276 3.3698 H 1 LGD 0.1486
123 H22 -0.9702 0.6085 5.9548 H 1 LGD 0.0542
124 H23 -3.3888 -2.8162 6.8272 H 1 LGD 0.1105
125 H24 0.8895 -0.7783 -3.0122 H 1 LGD 0.3610
126 H25 -6.2715 -1.8897 -1.6052 H 1 LGD 0.1623
127 H26 -6.6949 2.1975 -0.2543 H 1 LGD 0.1725
128 H27 3.7973 -4.4544 -0.8830 H 1 LGD 0.1821
129 H28 4.8824 -2.4131 2.7788 H 1 LGD 0.0940
130 H29 -1.6417 -1.2815 7.2742 H 1 LGD 0.0622
131 H30 -2.6115 -0.2474 3.8133 H 1 LGD 0.4364
132 H31 -2.2281 -0.9546 -2.0345 H 1 LGD 0.3073
133 H32 -4.0717 -0.0297 6.5529 H 1 LGD 0.4461
134 H33 -4.2185 -0.7168 -2.9955 H 1 LGD 0.0586
135 H34 4.0942 -0.2202 -3.0928 H 1 LGD 0.1046
136 H35 -8.1185 -0.4326 -2.4766 H 1 LGD 0.0671
137 H36 6.5932 -3.5484 1.4025 H 1 LGD 0.0395
138 H37 3.9537 -1.2489 -0.3539 H 1 LGD 0.3049
139 H38 -6.0942 -0.2868 -3.7544 H 1 LGD 0.0770
140 H39 -8.7887 1.7603 -2.9259 H 1 LGD 0.4633
141 H40 7.5074 -2.1536 -0.4355 H 1 LGD 0.1383
142 H41 6.1195 -5.3207 0.0877 H 1 LGD 0.4331
143 H42 -3.8753 1.9808 -5.3667 H 1 LGD 0.1458
144 H43 -3.0196 -2.2095 -4.7447 H 1 LGD 0.1186
145 H44 -5.8950 2.6195 -2.9768 H 1 LGD 0.3391
146 H45 5.5629 -1.0810 1.5237 H 1 LGD 0.2964
147 H46 -3.1385 -2.5829 -7.1911 H 1 LGD 0.1483
148 H47 -5.6582 0.4821 -5.9334 H 1 LGD 0.3148
149 H48 -7.8044 2.1132 -7.2048 H 1 LGD 0.0838
150 H49 7.1277 2.2354 1.4178 H 1 LGD 0.1491
151 H50 4.9598 1.9338 0.1231 H 1 LGD 0.1019
152 H51 4.3312 0.9575 1.4418 H 1 LGD 0.1019
153 H52 6.1048 1.7950 3.5774 H 1 LGD 0.4457
154 H53 -7.2814 3.5483 -8.9313 H 1 LGD 0.1587
155 H54 -3.2159 4.2770 -10.1151 H 1 LGD 0.1197
156 H55 -1.7093 2.9775 -9.2844 H 1 LGD 0.4153
157 H56 -4.9347 5.4439 -10.8222 H 1 LGD 0.4166
158 H57 -4.2964 -0.0392 -9.3771 H 1 LGD 0.4715
159 H58 8.3105 -0.0433 2.9220 H 1 LGD 0.1071
160 H59 8.4857 1.6829 3.3223 H 1 LGD 0.1071
161 H60 7.8837 0.5400 4.5485 H 1 LGD 0.1071
162 H61 4.6266 2.9605 2.9963 H 1 LGD -0.0116
163 H62 2.8220 3.4557 0.5578 H 1 LGD 0.0560
164 H63 2.4161 2.4199 1.9417 H 1 LGD 0.0560
165 H64 2.6214 4.1664 2.1754 H 1 LGD 0.0560
166 H65 6.3775 4.2281 1.7823 H 1 LGD 0.0560
167 H66 5.2884 4.4637 0.3965 H 1 LGD 0.0560
168 H67 4.9288 5.2307 1.9575 H 1 LGD 0.0560
169 H68 3.8205 -2.7775 -3.3705 H 1 LGD 0.0840
170 H69 2.2761 -2.6567 -2.5334 H 1 LGD 0.0840
171 H70 4.0880 -1.1514 -5.4046 H 1 LGD 0.3296
172 H71 2.6580 -1.0541 -6.4120 H 1 LGD 0.3296
173 H72 -4.0194 -1.4375 4.1619 H 1 LGD 0.0522
174 H73 -4.5379 -3.0623 4.6159 H 1 LGD 0.0522
175 H74 -6.1243 -1.4982 5.0891 H 1 LGD 0.4323
176 H75 3.0127 0.5320 8.9160 H 1 LGD 0.4642
177 H76 5.9377 0.2080 3.1949 H 1 LGD 0.4457
@BOND
1 1 2 1
2 1 3 1
3 2 4 1
4 3 5 1
5 4 6 1
6 4 7 1
7 4 8 1
8 5 9 1
9 6 10 1
10 5 6 1
11 11 12 ar
12 11 13 ar
13 11 14 1
14 12 15 ar
15 12 16 1
16 13 17 ar
17 13 18 1
18 14 19 1
19 15 20 ar
20 16 21 1
21 18 22 1
22 19 23 1
23 19 24 1
24 20 25 1
25 21 26 ar
26 21 27 ar
27 22 28 ar
28 22 29 ar
29 23 30 1
30 24 31 1
31 25 32 1
32 25 33 1
33 26 34 ar
34 26 35 1
35 27 36 ar
36 28 37 ar
37 28 38 1
38 29 39 ar
39 30 40 1
40 30 41 1
41 32 42 am
42 32 43 2
43 33 44 am
44 34 45 ar
45 37 46 ar
46 40 47 1
47 42 48 1
48 44 49 1
49 44 50 2
50 45 51 1
51 46 52 1
52 48 53 1
53 48 54 1
54 49 55 1
55 51 56 1
56 51 57 1
57 52 58 1
58 52 59 1
59 53 60 ar
60 53 61 ar
61 54 62 am
62 55 63 am
63 56 64 1
64 58 65 1
65 60 66 ar
66 61 67 ar
67 63 68 2
68 64 69 am
69 64 70 2
70 65 71 am
71 66 72 1
72 66 73 ar
73 69 74 1
74 71 75 1
75 71 76 2
76 72 77 ar
77 72 78 ar
78 74 79 1
79 75 80 1
80 75 81 1
81 77 82 ar
82 78 83 ar
83 78 84 1
84 82 85 ar
85 85 86 1
86 17 20 ar
87 31 40 1
88 36 45 ar
89 39 46 ar
90 56 62 1
91 58 63 1
92 67 73 ar
93 74 77 1
94 83 85 ar
95 54 87 2
96 73 88 1
97 79 89 1
98 79 90 2
99 81 91 1
100 80 92 1
101 92 93 1
102 92 94 1
103 49 95 1
104 95 96 1
105 96 97 am
106 96 98 2
107 31 99 1
108 99 100 1
109 23 101 1
110 1 101 1
111 1 102 1
112 2 103 1
113 2 104 1
114 5 105 1
115 6 106 1
116 7 107 1
117 7 108 1
118 7 109 1
119 8 110 1
120 8 111 1
121 9 112 1
122 9 113 1
123 9 114 1
124 10 115 1
125 15 116 1
126 17 117 1
127 19 118 1
128 23 119 1
129 25 120 1
130 27 121 1
131 29 122 1
132 30 123 1
133 31 124 1
134 33 125 1
135 34 126 1
136 36 127 1
137 37 128 1
138 39 129 1
139 40 130 1
140 41 131 1
141 42 132 1
142 47 133 1
143 48 134 1
144 49 135 1
145 51 136 1
146 52 137 1
147 55 138 1
148 56 139 1
149 57 140 1
150 58 141 1
151 59 142 1
152 60 143 1
153 61 144 1
154 62 145 1
155 65 146 1
156 67 147 1
157 69 148 1
158 74 149 1
159 75 150 1
160 80 151 1
161 80 152 1
162 81 153 1
163 82 154 1
164 83 155 1
165 84 156 1
166 86 157 1
167 88 158 1
168 91 159 1
169 91 160 1
170 91 161 1
171 92 162 1
172 93 163 1
173 93 164 1
174 93 165 1
175 94 166 1
176 94 167 1
177 94 168 1
178 95 169 1
179 95 170 1
180 97 171 1
181 97 172 1
182 99 173 1
183 99 174 1
184 100 175 1
185 8 176 1
186 81 177 1