@COMMENT
LIGANDBOX_ID = D01155-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D01155
NAME = Gemcitabine_hydrochloride_(JAN/USP)_Gemzar_(TN)
MOLECULAR_FORMULA = C9H11N3O4F2
MOLECULAR_WEIGHT = 263.200
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 4
NUM_OF_ACCEPTOR = 5
NUM_OF_CHIRAL_ATOMS = 3
TPSA = 108.3800
HOMO = -9.6182
LUMO = -0.4203
mLOGD = 0.473
mLOGS = -1.631
mLOGPA = -5.902
@MOLECULE
D01155-02
29 30 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.4267 0.5097 -0.6684 C.3 1 LGD 0.2671
2 N1 0.5308 0.9260 0.3958 N.am 1 LGD -0.4026
3 C2 -1.8752 0.2181 -0.1913 C.3 1 LGD 0.3577
4 O1 0.0073 -0.6670 -1.3933 O.3 1 LGD -0.3943
5 C3 1.2042 0.0093 1.2085 C.2 1 LGD 0.8723
6 C4 0.7726 2.2879 0.5305 C.2 1 LGD 0.0612
7 C5 -2.2842 -1.0117 -1.0183 C.3 1 LGD 0.0713
8 F1 -1.9189 -0.0517 1.1363 F 1 LGD -0.2120
9 F2 -2.6905 1.2678 -0.4354 F 1 LGD -0.2120
10 C6 -0.9444 -1.7386 -1.2138 C.3 1 LGD 0.0575
11 N2 2.1115 0.5305 2.1267 N.2 1 LGD -0.7661
12 O2 1.0158 -1.1923 1.1526 O.2 1 LGD -0.5938
13 C7 1.6823 2.7608 1.4511 C.2 1 LGD -0.3966
14 O3 -3.2515 -1.8398 -0.3689 O.3 1 LGD -0.5640
15 C8 -0.9135 -2.6623 -2.4511 C.3 1 LGD 0.1534
16 C9 2.3753 1.8136 2.2823 C.2 1 LGD 0.7590
17 O4 0.3900 -3.2103 -2.6240 O.3 1 LGD -0.5903
18 N3 3.2907 2.2155 3.2122 N.pl3 1 LGD -0.9090
19 H1 -0.4648 1.3326 -1.3918 H 1 LGD 0.0878
20 H2 0.1972 2.9126 -0.1415 H 1 LGD 0.1561
21 H3 -2.6633 -0.6817 -1.9944 H 1 LGD 0.1082
22 H4 -0.7014 -2.3142 -0.3118 H 1 LGD 0.1031
23 H5 1.8735 3.8231 1.5499 H 1 LGD 0.1522
24 H6 -3.0336 -1.8469 0.5805 H 1 LGD 0.4255
25 H7 -1.6458 -3.4693 -2.3226 H 1 LGD 0.0555
26 H8 -1.1977 -2.0870 -3.3414 H 1 LGD 0.0555
27 H9 1.0211 -2.4804 -2.4904 H 1 LGD 0.4213
28 H10 3.8772 1.4961 3.6068 H 1 LGD 0.4380
29 H11 3.6634 3.1483 3.1261 H 1 LGD 0.4380
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 am
5 2 6 1
6 3 7 1
7 3 8 1
8 3 9 1
9 4 10 1
10 5 11 1
11 5 12 2
12 6 13 2
13 7 14 1
14 10 15 1
15 11 16 2
16 15 17 1
17 16 18 1
18 7 10 1
19 13 16 1
20 1 19 1
21 6 20 1
22 7 21 1
23 10 22 1
24 13 23 1
25 14 24 1
26 15 25 1
27 15 26 1
28 17 27 1
29 18 28 1
30 18 29 1