@COMMENT
LIGANDBOX_ID = D01155-03
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D01155
NAME = Gemcitabine_hydrochloride_(JAN/USP)_Gemzar_(TN)
MOLECULAR_FORMULA = C9H11N3O4F2
MOLECULAR_WEIGHT = 263.200
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 4
NUM_OF_ACCEPTOR = 5
NUM_OF_CHIRAL_ATOMS = 3
TPSA = 108.3800
HOMO = -9.6182
LUMO = -0.4203
mLOGD = 0.473
mLOGS = -1.631
mLOGPA = -5.902
@MOLECULE
D01155-03
29 30 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.2380 0.4463 -0.7594 C.3 1 LGD 0.2577
2 N1 0.8063 0.7292 0.2599 N.am 1 LGD -0.3904
3 C2 0.1413 -0.6419 -1.8065 C.3 1 LGD 0.3487
4 O1 -1.4623 -0.0222 -0.1607 O.3 1 LGD -0.3918
5 C3 0.9876 -0.0867 1.3792 C.2 1 LGD 0.8755
6 C4 1.5878 1.8625 0.0810 C.2 1 LGD 0.0645
7 C5 -1.0827 -1.5948 -1.8347 C.3 1 LGD 0.0846
8 F1 0.3180 -0.0692 -3.0181 F 1 LGD -0.2127
9 F2 1.2874 -1.2918 -1.4877 F 1 LGD -0.2127
10 C6 -2.1802 -0.7145 -1.1922 C.3 1 LGD 0.0515
11 N2 1.9503 0.3182 2.3006 N.2 1 LGD -0.7642
12 O2 0.3639 -1.1202 1.5531 O.2 1 LGD -0.5989
13 C7 2.5354 2.2229 1.0137 C.2 1 LGD -0.3962
14 O3 -0.8378 -2.7661 -1.0457 O.3 1 LGD -0.5711
15 C8 -3.3801 -1.4780 -0.5796 C.3 1 LGD 0.1575
16 C9 2.6999 1.3984 2.1815 C.2 1 LGD 0.7604
17 O4 -4.2901 -0.5608 0.0204 O.3 1 LGD -0.5968
18 N3 3.6189 1.7047 3.1440 N.pl3 1 LGD -0.9088
19 H1 -0.4523 1.3863 -1.2819 H 1 LGD 0.0767
20 H2 1.3788 2.4098 -0.8300 H 1 LGD 0.1577
21 H3 -1.3553 -1.8662 -2.8626 H 1 LGD 0.1139
22 H4 -2.5480 0.0052 -1.9360 H 1 LGD 0.0630
23 H5 3.1417 3.1110 0.8767 H 1 LGD 0.1532
24 H6 -0.4725 -2.4672 -0.1921 H 1 LGD 0.4448
25 H7 -3.8879 -2.0473 -1.3683 H 1 LGD 0.0683
26 H8 -3.0247 -2.1901 0.1758 H 1 LGD 0.0683
27 H9 -3.7759 -0.0265 0.6515 H 1 LGD 0.4195
28 H10 3.8313 0.9802 3.8126 H 1 LGD 0.4389
29 H11 4.3400 2.3680 2.9055 H 1 LGD 0.4389
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 am
5 2 6 1
6 3 7 1
7 3 8 1
8 3 9 1
9 4 10 1
10 5 11 1
11 5 12 2
12 6 13 2
13 7 14 1
14 10 15 1
15 11 16 2
16 15 17 1
17 16 18 1
18 7 10 1
19 13 16 1
20 1 19 1
21 6 20 1
22 7 21 1
23 10 22 1
24 13 23 1
25 14 24 1
26 15 25 1
27 15 26 1
28 17 27 1
29 18 28 1
30 18 29 1