@COMMENT
LIGANDBOX_ID = D01155-04
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D01155
NAME = Gemcitabine_hydrochloride_(JAN/USP)_Gemzar_(TN)
MOLECULAR_FORMULA = C9H11N3O4F2
MOLECULAR_WEIGHT = 263.200
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 4
NUM_OF_ACCEPTOR = 5
NUM_OF_CHIRAL_ATOMS = 3
TPSA = 108.3800
HOMO = -9.6182
LUMO = -0.4203
mLOGD = 0.473
mLOGS = -1.631
mLOGPA = -5.902
@MOLECULE
D01155-04
29 30 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.3037 0.2355 -0.2780 C.3 1 LGD 0.2678
2 N1 0.7010 0.5400 0.7759 N.am 1 LGD -0.3910
3 C2 0.1210 -0.8686 -1.2865 C.3 1 LGD 0.3473
4 O1 -1.5532 -0.2278 0.2779 O.3 1 LGD -0.3701
5 C3 0.8364 -0.2472 1.9228 C.2 1 LGD 0.8693
6 C4 1.5039 1.6580 0.5924 C.2 1 LGD 0.0619
7 C5 -1.1099 -1.8029 -1.3653 C.3 1 LGD 0.0634
8 F1 0.4068 -0.3133 -2.4874 F 1 LGD -0.2152
9 F2 1.2120 -1.5561 -0.8762 F 1 LGD -0.2152
10 C6 -2.2559 -0.9713 -0.7354 C.3 1 LGD 0.0920
11 N2 1.7885 0.1594 2.8537 N.2 1 LGD -0.7635
12 O2 0.1848 -1.2593 2.1140 O.2 1 LGD -0.5782
13 C7 2.4379 2.0220 1.5378 C.2 1 LGD -0.3957
14 O3 -1.3969 -2.2625 -2.6905 O.3 1 LGD -0.5882
15 C8 -2.9717 0.0279 -1.6911 C.3 1 LGD 0.1186
16 C9 2.5648 1.2186 2.7247 C.2 1 LGD 0.7572
17 O4 -3.7966 -0.6681 -2.6216 O.3 1 LGD -0.5943
18 N3 3.4749 1.5213 3.6964 N.pl3 1 LGD -0.9085
19 H1 -0.4966 1.1658 -0.8253 H 1 LGD 0.0761
20 H2 1.3247 2.1894 -0.3342 H 1 LGD 0.1556
21 H3 -0.9271 -2.6665 -0.7120 H 1 LGD 0.1096
22 H4 -2.9985 -1.6307 -0.2682 H 1 LGD 0.1204
23 H5 3.0636 2.8955 1.3949 H 1 LGD 0.1523
24 H6 -0.6146 -2.0674 -3.2376 H 1 LGD 0.4275
25 H7 -3.5889 0.7126 -1.0960 H 1 LGD 0.0503
26 H8 -2.2303 0.6294 -2.2317 H 1 LGD 0.0503
27 H9 -3.2543 -1.3920 -2.9867 H 1 LGD 0.4253
28 H10 3.6609 0.8009 4.3774 H 1 LGD 0.4375
29 H11 4.2184 2.1579 3.4544 H 1 LGD 0.4375
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 am
5 2 6 1
6 3 7 1
7 3 8 1
8 3 9 1
9 4 10 1
10 5 11 1
11 5 12 2
12 6 13 2
13 7 14 1
14 10 15 1
15 11 16 2
16 15 17 1
17 16 18 1
18 7 10 1
19 13 16 1
20 1 19 1
21 6 20 1
22 7 21 1
23 10 22 1
24 13 23 1
25 14 24 1
26 15 25 1
27 15 26 1
28 17 27 1
29 18 28 1
30 18 29 1