@COMMENT
LIGANDBOX_ID = D01250-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D01250
NAME = Berberine_chloride_hydrate_(JP18)_Kyoberin_(TN)
MOLECULAR_FORMULA = C20H18NO4
MOLECULAR_WEIGHT = 336.367
MOLECULAR_CHARGE = 1
NUM_OF_DONOR = 0
NUM_OF_ACCEPTOR = 4
NUM_OF_CHIRAL_ATOMS = 0
TPSA = 40.8000
HOMO = -11.3175
LUMO = -5.0068
mLOGD = 2.626
mLOGS = -3.437
mLOGPA = -4.282
@MOLECULE
D01250-01
43 47 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 23.6130 -15.4510 -0.1760 C.ar 1 LGD 0.1079
2 C2 23.6300 -16.8050 -0.0290 C.ar 1 LGD 0.0550
3 C3 24.8180 -17.5360 0.0120 C.ar 1 LGD -0.0662
4 C4 26.0550 -16.8360 -0.0930 C.ar 1 LGD -0.0957
5 C5 26.0180 -15.4120 -0.2500 C.ar 1 LGD -0.0566
6 C6 24.7890 -14.7140 -0.2960 C.ar 1 LGD -0.1100
7 C7 27.3150 -17.5160 -0.0420 C.ar 1 LGD 0.0723
8 N1 28.5070 -16.7570 0.0200 N.ar 1 LGD -0.0173
9 C8 28.4590 -15.3140 0.3140 C.3 1 LGD 0.0149
10 C9 27.3040 -14.6190 -0.4130 C.3 1 LGD -0.0489
11 C10 27.4190 -18.9300 -0.0260 C.ar 1 LGD -0.1173
12 C11 28.6680 -19.5690 -0.0030 C.ar 1 LGD 0.0176
13 C12 29.8460 -18.8070 -0.0140 C.ar 1 LGD -0.0894
14 C13 29.7500 -17.4040 -0.0380 C.ar 1 LGD 0.0717
15 C14 28.7410 -20.9690 0.0140 C.ar 1 LGD -0.1368
16 C15 29.9850 -21.6100 0.0290 C.ar 1 LGD -0.0971
17 C16 31.1830 -20.8610 0.0250 C.ar 1 LGD 0.0943
18 C17 31.1110 -19.4360 0.0010 C.ar 1 LGD 0.1823
19 O1 22.3380 -14.9800 -0.1790 O.3 1 LGD -0.3060
20 C18 21.4710 -16.1410 -0.0060 C.3 1 LGD 0.3256
21 O2 22.3640 -17.2920 0.0750 O.3 1 LGD -0.3145
22 O3 32.2220 -18.5980 0.0030 O.3 1 LGD -0.3672
23 C19 33.6010 -19.0120 0.0320 C.3 1 LGD 0.1491
24 O4 32.4070 -21.5110 0.0480 O.3 1 LGD -0.3517
25 C20 32.5600 -22.9420 0.0860 C.3 1 LGD 0.1361
26 H1 24.7470 -18.6080 0.1470 H 1 LGD 0.1600
27 H2 24.7510 -13.6360 -0.4220 H 1 LGD 0.1715
28 H3 28.3310 -15.1840 1.3970 H 1 LGD 0.0903
29 H4 29.4060 -14.8370 0.0250 H 1 LGD 0.0903
30 H5 27.1920 -13.5980 -0.0280 H 1 LGD 0.0883
31 H6 27.5460 -14.5330 -1.4800 H 1 LGD 0.0883
32 H7 26.5410 -19.5620 -0.0580 H 1 LGD 0.1805
33 H8 30.6410 -16.7750 -0.0560 H 1 LGD 0.2093
34 H9 27.8330 -21.5670 0.0160 H 1 LGD 0.1641
35 H10 30.0010 -22.6950 0.0440 H 1 LGD 0.1665
36 H11 20.8980 -16.0450 0.9240 H 1 LGD 0.0912
37 H12 20.8010 -16.2430 -0.8680 H 1 LGD 0.0912
38 H13 34.2540 -18.1310 0.0450 H 1 LGD 0.0619
39 H14 33.8050 -19.6050 0.9330 H 1 LGD 0.0619
40 H15 33.8420 -19.6080 -0.8570 H 1 LGD 0.0619
41 H16 32.1170 -23.3980 -0.8090 H 1 LGD 0.0569
42 H17 33.6260 -23.2010 0.1160 H 1 LGD 0.0569
43 H18 32.0770 -23.3560 0.9800 H 1 LGD 0.0569
@BOND
1 1 2 ar
2 2 3 ar
3 3 4 ar
4 4 5 ar
5 5 6 ar
6 1 6 ar
7 4 7 1
8 7 8 2
9 8 9 1
10 9 10 1
11 5 10 1
12 7 11 1
13 11 12 2
14 12 13 1
15 13 14 2
16 8 14 1
17 12 15 1
18 15 16 2
19 16 17 1
20 17 18 2
21 13 18 1
22 1 19 1
23 19 20 1
24 20 21 1
25 2 21 1
26 18 22 1
27 22 23 1
28 17 24 1
29 24 25 1
30 3 26 1
31 6 27 1
32 9 28 1
33 9 29 1
34 10 30 1
35 10 31 1
36 11 32 1
37 14 33 1
38 15 34 1
39 16 35 1
40 20 36 1
41 20 37 1
42 23 38 1
43 23 39 1
44 23 40 1
45 25 41 1
46 25 42 1
47 25 43 1