@COMMENT
LIGANDBOX_ID = D01753-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D01753
NAME = Dibekacin_sulfate_(JP18)_Panimycin_(TN)
MOLECULAR_FORMULA = C18H37N5O8
MOLECULAR_WEIGHT = 451.521
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 14
NUM_OF_ACCEPTOR = 8
NUM_OF_CHIRAL_ATOMS = 13
TPSA = 247.9400
HOMO = -21.1365
LUMO = -14.2136
mLOGS = 7.454
mLOGD = -3.785
mLOGPA = -5.705
@MOLECULE
D01753-01
73 75 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 23.0880 -17.4740 1.4210 C.3 1 LGD 0.0800
2 C2 21.8240 -18.3790 1.3420 C.3 1 LGD 0.0968
3 C3 22.1810 -19.7870 0.7880 C.3 1 LGD 0.0208
4 C4 23.3710 -20.4010 1.5750 C.3 1 LGD 0.1122
5 C5 24.5700 -19.4160 1.6240 C.3 1 LGD 0.3495
6 O1 24.1120 -18.1640 2.1840 O.3 1 LGD -0.4026
7 N1 21.0040 -20.6710 0.8740 N.4 1 LGD -0.8197
8 O2 20.8300 -17.7630 0.5170 O.3 1 LGD -0.5231
9 O3 23.7770 -21.6470 1.0000 O.3 1 LGD -0.5984
10 O4 25.0590 -19.1800 0.2860 O.3 1 LGD -0.4636
11 C6 26.3450 -18.5310 0.1770 C.3 1 LGD 0.1074
12 C7 27.4570 -19.5910 0.4430 C.3 1 LGD 0.0841
13 C8 27.4140 -20.7680 -0.5820 C.3 1 LGD -0.1196
14 C9 26.7000 -20.4200 -1.9230 C.3 1 LGD 0.1057
15 C10 26.9290 -18.9420 -2.3410 C.3 1 LGD 0.0973
16 C11 26.4320 -17.9250 -1.2580 C.3 1 LGD 0.1008
17 N2 28.7810 -18.9420 0.4100 N.4 1 LGD -0.8227
18 N3 27.1610 -21.3360 -2.9770 N.4 1 LGD -0.8164
19 O5 26.2110 -18.7040 -3.5740 O.3 1 LGD -0.5014
20 O6 27.2840 -16.7760 -1.2500 O.3 1 LGD -0.5200
21 C12 26.6130 -17.5400 -4.3310 C.3 1 LGD 0.3303
22 O7 27.8610 -17.8170 -5.0100 O.3 1 LGD -0.3868
23 C13 27.8480 -18.9300 -5.9360 C.3 1 LGD 0.1191
24 C14 26.8300 -18.6150 -7.0650 C.3 1 LGD -0.1169
25 C15 25.4340 -18.3010 -6.4800 C.3 1 LGD -0.0981
26 C16 25.5300 -17.2020 -5.3940 C.3 1 LGD 0.0836
27 C17 29.2920 -19.1060 -6.4620 C.3 1 LGD 0.0935
28 N4 29.4020 -20.3020 -7.3100 N.4 1 LGD -0.8079
29 N5 24.2190 -17.0120 -4.7540 N.4 1 LGD -0.8144
30 C18 22.8200 -16.1150 2.1160 C.3 1 LGD 0.1543
31 O8 22.4630 -16.3000 3.4860 O.3 1 LGD -0.5352
32 H1 23.4500 -17.2730 0.4050 H 1 LGD 0.0267
33 H2 21.4260 -18.4990 2.3590 H 1 LGD 0.1513
34 H3 22.4740 -19.6860 -0.2650 H 1 LGD 0.0912
35 H4 23.0470 -20.5720 2.6090 H 1 LGD 0.1225
36 H5 25.3610 -19.8400 2.2520 H 1 LGD 0.1229
37 H6 20.2150 -20.2110 0.4400 H 1 LGD 0.4805
38 H7 21.2330 -21.5720 0.4810 H 1 LGD 0.4805
39 H8 21.0920 -17.8910 -0.4120 H 1 LGD 0.3951
40 H9 23.0370 -22.2710 1.1020 H 1 LGD 0.4391
41 H10 26.4120 -17.7180 0.9130 H 1 LGD 0.1404
42 H11 27.3270 -20.0070 1.4500 H 1 LGD 0.1673
43 H12 28.4350 -21.1220 -0.7770 H 1 LGD 0.1176
44 H13 26.8850 -21.6140 -0.1250 H 1 LGD 0.1176
45 H14 25.6200 -20.5680 -1.7900 H 1 LGD 0.1547
46 H15 28.0070 -18.8040 -2.5060 H 1 LGD 0.0634
47 H16 25.4180 -17.6060 -1.5330 H 1 LGD 0.1295
48 H17 28.8020 -18.1920 1.0860 H 1 LGD 0.4760
49 H18 29.4960 -19.6430 0.5400 H 1 LGD 0.4760
50 H19 28.1630 -21.2500 -3.0740 H 1 LGD 0.4748
51 H20 26.6410 -21.1400 -3.8210 H 1 LGD 0.4748
52 H21 28.1660 -17.0740 -0.9610 H 1 LGD 0.3953
53 H22 26.7400 -16.6790 -3.6650 H 1 LGD 0.1491
54 H23 27.5450 -19.8470 -5.4140 H 1 LGD 0.0010
55 H24 27.1820 -17.7570 -7.6520 H 1 LGD 0.1090
56 H25 26.7520 -19.4650 -7.7540 H 1 LGD 0.1090
57 H26 24.7580 -17.9790 -7.2830 H 1 LGD 0.0963
58 H27 25.0100 -19.2160 -6.0480 H 1 LGD 0.0963
59 H28 25.8180 -16.2610 -5.8810 H 1 LGD 0.1769
60 H29 29.5850 -18.2190 -7.0390 H 1 LGD 0.1465
61 H30 29.9770 -19.2040 -5.6110 H 1 LGD 0.1465
62 H31 29.1000 -21.1120 -6.7870 H 1 LGD 0.4771
63 H32 30.3410 -20.3640 -7.6780 H 1 LGD 0.4771
64 H33 23.9410 -17.8840 -4.3270 H 1 LGD 0.4757
65 H34 24.2710 -16.2310 -4.1150 H 1 LGD 0.4757
66 H35 23.7260 -15.5000 2.0490 H 1 LGD 0.0897
67 H36 22.0190 -15.5830 1.5870 H 1 LGD 0.0897
68 H37 23.1230 -16.9100 3.8640 H 1 LGD 0.4145
69 H38 20.7163 -20.7380 1.8294 H 1 LGD 0.4805
70 H39 28.8831 -18.4545 -0.4571 H 1 LGD 0.4760
71 H40 27.0233 -22.2785 -2.6724 H 1 LGD 0.4748
72 H41 28.7144 -20.2519 -8.0344 H 1 LGD 0.4771
73 H42 23.5288 -16.8658 -5.4627 H 1 LGD 0.4757
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 11 12 1
5 12 13 1
6 13 14 1
7 14 15 1
8 15 16 1
9 11 16 1
10 4 5 1
11 12 17 1
12 5 6 1
13 14 18 1
14 1 6 1
15 15 19 1
16 16 20 1
17 3 7 1
18 19 21 1
19 2 8 1
20 4 9 1
21 21 22 1
22 22 23 1
23 23 24 1
24 24 25 1
25 25 26 1
26 21 26 1
27 5 10 1
28 23 27 1
29 27 28 1
30 10 11 1
31 26 29 1
32 1 30 1
33 30 31 1
34 1 32 1
35 2 33 1
36 3 34 1
37 4 35 1
38 5 36 1
39 7 37 1
40 7 38 1
41 8 39 1
42 9 40 1
43 11 41 1
44 12 42 1
45 13 43 1
46 13 44 1
47 14 45 1
48 15 46 1
49 16 47 1
50 17 48 1
51 17 49 1
52 18 50 1
53 18 51 1
54 20 52 1
55 21 53 1
56 23 54 1
57 24 55 1
58 24 56 1
59 25 57 1
60 25 58 1
61 26 59 1
62 27 60 1
63 27 61 1
64 28 62 1
65 28 63 1
66 29 64 1
67 29 65 1
68 30 66 1
69 30 67 1
70 31 68 1
71 7 69 1
72 17 70 1
73 18 71 1
74 28 72 1
75 29 73 1