@COMMENT
LIGANDBOX_ID = D01753-10
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D01753
NAME = Dibekacin_sulfate_(JP18)_Panimycin_(TN)
MOLECULAR_FORMULA = C18H37N5O8
MOLECULAR_WEIGHT = 451.521
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 14
NUM_OF_ACCEPTOR = 8
NUM_OF_CHIRAL_ATOMS = 13
TPSA = 247.9400
HOMO = -21.1365
LUMO = -14.2136
mLOGS = 7.454
mLOGD = -3.785
mLOGPA = -5.705
@MOLECULE
D01753-10
73 75 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -2.5025 1.4430 3.3445 C.3 1 LGD 0.0766
2 C2 -3.7631 0.5331 3.2911 C.3 1 LGD 0.0963
3 C3 -3.4114 -0.8480 2.6844 C.3 1 LGD 0.0547
4 C4 -2.2105 -1.4844 3.4286 C.3 1 LGD 0.1111
5 C5 -1.0075 -0.5032 3.4770 C.3 1 LGD 0.3362
6 O1 -1.4556 0.7424 4.0626 O.3 1 LGD -0.4045
7 N1 -4.5878 -1.7368 2.7617 N.4 1 LGD -0.8126
8 O2 -4.7904 1.1479 2.5130 O.3 1 LGD -0.5301
9 O3 -1.8306 -2.7087 2.7954 O.3 1 LGD -0.6243
10 O4 -0.5335 -0.2562 2.1350 O.3 1 LGD -0.4764
11 C6 0.7391 0.4235 2.0202 C.3 1 LGD 0.0950
12 C7 1.8629 -0.6152 2.3124 C.3 1 LGD 0.1022
13 C8 1.8602 -1.7941 1.2886 C.3 1 LGD -0.1211
14 C9 1.1158 -1.4694 -0.0376 C.3 1 LGD 0.1128
15 C10 1.3650 -0.0093 -0.4780 C.3 1 LGD 0.0934
16 C11 0.8372 1.0233 0.5799 C.3 1 LGD 0.1274
17 N2 3.1767 0.0622 2.2878 N.4 1 LGD -0.8277
18 N3 1.5564 -2.3944 -1.0980 N.4 1 LGD -0.8180
19 O5 0.7177 0.1928 -1.7536 O.3 1 LGD -0.4896
20 O6 -0.4407 1.5546 0.2173 O.3 1 LGD -0.5864
21 C12 1.1467 1.3565 -2.4945 C.3 1 LGD 0.3349
22 O7 2.3891 1.0691 -3.1760 O.3 1 LGD -0.3924
23 C13 2.3660 -0.0305 -4.1135 C.3 1 LGD 0.1210
24 C14 1.3384 0.2980 -5.2304 C.3 1 LGD -0.1184
25 C15 -0.0497 0.6236 -4.6341 C.3 1 LGD -0.0987
26 C16 0.0663 1.7198 -3.5488 C.3 1 LGD 0.0975
27 C17 3.8032 -0.1853 -4.6587 C.3 1 LGD 0.1045
28 N4 3.9030 -1.3660 -5.5413 N.4 1 LGD -0.8187
29 N5 -1.2408 1.8946 -2.8842 N.4 1 LGD -0.8155
30 C18 -2.7519 2.7931 4.0637 C.3 1 LGD 0.1544
31 O8 -3.1090 2.5908 5.4298 O.3 1 LGD -0.5357
32 H1 -2.1730 1.6588 2.3209 H 1 LGD 0.0183
33 H2 -4.1261 0.3810 4.3161 H 1 LGD 0.1541
34 H3 -3.1419 -0.7147 1.6349 H 1 LGD 0.0877
35 H4 -2.5121 -1.6892 4.4642 H 1 LGD 0.1204
36 H5 -0.2068 -0.9346 4.0887 H 1 LGD 0.1170
37 H6 -5.3657 -1.3040 2.2820 H 1 LGD 0.4802
38 H7 -4.3734 -2.6219 2.3237 H 1 LGD 0.4802
39 H8 -4.3927 1.4507 1.6778 H 1 LGD 0.4082
40 H9 -1.9980 -3.4356 3.4221 H 1 LGD 0.4664
41 H10 0.7896 1.2450 2.7475 H 1 LGD 0.1354
42 H11 1.7187 -1.0248 3.3149 H 1 LGD 0.1618
43 H12 2.8925 -2.1050 1.0789 H 1 LGD 0.1162
44 H13 1.3710 -2.6606 1.7517 H 1 LGD 0.1162
45 H14 0.0418 -1.5980 0.1178 H 1 LGD 0.1545
46 H15 2.4488 0.1246 -0.5928 H 1 LGD 0.0627
47 H16 1.5614 1.8475 0.6107 H 1 LGD 0.1124
48 H17 3.1942 0.8083 2.9703 H 1 LGD 0.4790
49 H18 3.9069 -0.5986 2.5180 H 1 LGD 0.4790
50 H19 2.5527 -2.3090 -1.2379 H 1 LGD 0.4742
51 H20 1.0801 -2.1560 -1.9572 H 1 LGD 0.4742
52 H21 -1.0982 1.0387 0.7189 H 1 LGD 0.4481
53 H22 1.2879 2.2052 -1.8148 H 1 LGD 0.1379
54 H23 2.0751 -0.9562 -3.6005 H 1 LGD 0.0051
55 H24 1.6931 1.1547 -5.8188 H 1 LGD 0.1075
56 H25 1.2459 -0.5498 -5.9209 H 1 LGD 0.1075
57 H26 -0.7287 0.9545 -5.4306 H 1 LGD 0.0962
58 H27 -0.4819 -0.2885 -4.2014 H 1 LGD 0.0962
59 H28 0.3519 2.6587 -4.0290 H 1 LGD 0.1734
60 H29 4.0831 0.7120 -5.2151 H 1 LGD 0.1438
61 H30 4.4959 -0.3035 -3.8227 H 1 LGD 0.1438
62 H31 3.6504 -2.2018 -5.0328 H 1 LGD 0.4789
63 H32 4.8517 -1.4611 -5.8786 H 1 LGD 0.4789
64 H33 -1.4883 1.0371 -2.4097 H 1 LGD 0.4754
65 H34 -1.1850 2.6374 -2.2007 H 1 LGD 0.4754
66 H35 -1.8412 3.4024 4.0031 H 1 LGD 0.0895
67 H36 -3.5490 3.3418 3.5462 H 1 LGD 0.0895
68 H37 -2.3705 2.1186 5.8535 H 1 LGD 0.4192
69 H38 -4.8444 -1.8917 3.7264 H 1 LGD 0.4802
70 H39 3.3588 0.4467 1.3720 H 1 LGD 0.4790
71 H40 1.3318 -3.3463 -0.8424 H 1 LGD 0.4742
72 H41 3.2851 -1.2588 -6.3337 H 1 LGD 0.4789
73 H42 -1.9510 2.1200 -3.5672 H 1 LGD 0.4754
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 11 12 1
5 12 13 1
6 13 14 1
7 14 15 1
8 15 16 1
9 11 16 1
10 4 5 1
11 12 17 1
12 5 6 1
13 14 18 1
14 1 6 1
15 15 19 1
16 16 20 1
17 3 7 1
18 19 21 1
19 2 8 1
20 4 9 1
21 21 22 1
22 22 23 1
23 23 24 1
24 24 25 1
25 25 26 1
26 21 26 1
27 5 10 1
28 23 27 1
29 27 28 1
30 10 11 1
31 26 29 1
32 1 30 1
33 30 31 1
34 1 32 1
35 2 33 1
36 3 34 1
37 4 35 1
38 5 36 1
39 7 37 1
40 7 38 1
41 8 39 1
42 9 40 1
43 11 41 1
44 12 42 1
45 13 43 1
46 13 44 1
47 14 45 1
48 15 46 1
49 16 47 1
50 17 48 1
51 17 49 1
52 18 50 1
53 18 51 1
54 20 52 1
55 21 53 1
56 23 54 1
57 24 55 1
58 24 56 1
59 25 57 1
60 25 58 1
61 26 59 1
62 27 60 1
63 27 61 1
64 28 62 1
65 28 63 1
66 29 64 1
67 29 65 1
68 30 66 1
69 30 67 1
70 31 68 1
71 7 69 1
72 17 70 1
73 18 71 1
74 28 72 1
75 29 73 1