@COMMENT
LIGANDBOX_ID = D01935-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D01935
NAME = Vinorelbine_tartrate_(USP)_Vinorelbine_ditartrate_(JAN)_KW_2307_Navelbine_(TN)
MOLECULAR_FORMULA = C45H54N4O8
MOLECULAR_WEIGHT = 778.947
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 8
NUM_OF_CHIRAL_ATOMS = 8
TPSA = 133.8700
HOMO = -12.8481
LUMO = -5.5773
mLOGD = 2.217
mLOGPA = -4.730
mLOGS = -2.772
@MOLECULE
D01935-02
113 121 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -2.2685 0.9071 2.0292 C.3 1 LGD 0.0369
2 C2 -2.4097 2.3622 2.5803 C.ar 1 LGD 0.0088
3 C3 -1.5020 -0.0316 3.0769 C.3 1 LGD -0.0437
4 C4 -3.6701 0.2528 1.8360 C.2 1 LGD 0.6166
5 C5 -1.4153 3.3793 2.7549 C.ar 1 LGD -0.2472
6 N1 -3.6606 2.9239 2.9203 N.ar 1 LGD -0.1426
7 C6 -0.1117 0.5461 3.3489 C.3 1 LGD -0.0890
8 O1 -4.3500 0.1198 3.0182 O.3 1 LGD -0.4562
9 O2 -4.1168 -0.1078 0.7579 O.2 1 LGD -0.4621
10 C7 -2.1404 4.5427 3.2026 C.ar 1 LGD -0.0837
11 C8 -3.4574 4.2271 3.2818 C.ar 1 LGD -0.0287
12 C9 -0.1190 1.6613 4.4024 C.3 1 LGD 0.1202
13 C10 -5.6631 -0.4689 3.0102 C.3 1 LGD 0.1214
14 C11 -1.6808 5.8251 3.5302 C.ar 1 LGD -0.1236
15 C12 -4.4347 5.1436 3.6830 C.ar 1 LGD -0.1327
16 N2 0.7567 2.7018 3.8357 N.4 1 LGD -0.6818
17 C13 -2.6335 6.7835 3.9383 C.ar 1 LGD -0.1127
18 C14 -4.0057 6.4446 4.0143 C.ar 1 LGD -0.0907
19 C15 2.1414 2.1319 3.6209 C.3 1 LGD 0.1581
20 C16 2.2429 0.5669 3.6889 C.2 1 LGD -0.1421
21 C17 1.1426 -0.2080 3.5883 C.2 1 LGD -0.1558
22 C18 3.6641 0.0478 3.8681 C.3 1 LGD -0.0460
23 C19 3.7772 -1.4864 4.0255 C.3 1 LGD -0.0889
24 C20 0.1103 3.2792 2.6057 C.3 1 LGD 0.2137
25 C21 1.1084 -0.7746 -1.5900 C.3 1 LGD -0.0258
26 C22 1.0132 -2.2860 -1.3188 C.3 1 LGD 0.1353
27 C23 1.0542 -0.3928 -3.1161 C.3 1 LGD 0.2337
28 C24 2.3790 -0.3405 -0.8273 C.3 1 LGD -0.0914
29 C25 1.7264 -3.1894 -2.3983 C.3 1 LGD -0.0365
30 N3 1.5350 -2.4395 0.0646 N.4 1 LGD -0.6641
31 C26 0.3270 -1.5061 -3.9687 C.3 1 LGD 0.0991
32 N4 0.2685 0.8717 -3.1521 N.pl3 1 LGD -0.6414
33 C27 -0.4108 1.0049 -1.9560 C.ar 1 LGD 0.2447
34 C28 2.5810 -1.4059 0.2743 C.3 1 LGD 0.1017
35 C29 1.0531 -2.9062 -3.8113 C.3 1 LGD 0.1398
36 C30 1.5743 -4.6067 -1.8689 C.2 1 LGD -0.1101
37 C31 3.2783 -2.9376 -2.5375 C.3 1 LGD -0.0734
38 C32 1.9749 -3.8002 0.4794 C.3 1 LGD 0.1607
39 C33 0.3227 -1.0963 -5.4635 C.2 1 LGD 0.6333
40 O3 -1.0427 -1.5893 -3.5370 O.3 1 LGD -0.5641
41 C34 0.8775 2.0219 -3.8361 C.3 1 LGD 0.1983
42 O4 0.2223 -4.0020 -4.3021 O.3 1 LGD -0.4267
43 C35 1.6711 -4.8681 -0.5624 C.2 1 LGD -0.2029
44 C36 4.0390 -4.0006 -3.3771 C.3 1 LGD -0.0987
45 O5 1.5886 -0.8590 -5.9292 O.3 1 LGD -0.4648
46 O6 -0.6852 -0.9902 -6.1454 O.2 1 LGD -0.4463
47 C37 1.7672 -0.4610 -7.3002 C.3 1 LGD 0.1273
48 C38 -1.5041 -5.6390 -4.4965 C.3 1 LGD -0.1460
49 C39 -0.8805 -4.5193 -3.6709 C.2 1 LGD 0.6600
50 O7 -1.3125 -4.1546 -2.5905 O.2 1 LGD -0.5555
51 C40 -0.0500 0.0413 -1.0451 C.ar 1 LGD -0.2383
52 C41 -0.6484 -0.0283 0.2148 C.ar 1 LGD -0.0543
53 C42 -1.4005 1.9416 -1.6558 C.ar 1 LGD -0.2293
54 C43 -1.6162 0.9381 0.5965 C.ar 1 LGD -0.1589
55 C44 -2.0134 1.9088 -0.3788 C.ar 1 LGD 0.2421
56 O8 -3.0283 2.7983 -0.0756 O.3 1 LGD -0.3467
57 C45 -3.4499 3.8616 -0.9457 C.3 1 LGD 0.1351
58 H1 -2.0506 -0.0853 4.0262 H 1 LGD 0.0788
59 H2 -1.4361 -1.0626 2.7092 H 1 LGD 0.0788
60 H3 -4.5510 2.4487 2.8855 H 1 LGD 0.3347
61 H4 0.1508 0.9182 2.3645 H 1 LGD 0.0674
62 H5 -1.1216 2.0490 4.5848 H 1 LGD 0.1197
63 H6 0.2919 1.2972 5.3461 H 1 LGD 0.1197
64 H7 -6.0646 -0.5012 4.0304 H 1 LGD 0.0633
65 H8 -6.3422 0.1238 2.3840 H 1 LGD 0.0633
66 H9 -5.6189 -1.4928 2.6176 H 1 LGD 0.0633
67 H10 -0.6268 6.0783 3.4671 H 1 LGD 0.1263
68 H11 -5.4835 4.8655 3.7369 H 1 LGD 0.1550
69 H12 -2.3122 7.7891 4.1945 H 1 LGD 0.1539
70 H13 -4.7314 7.1893 4.3290 H 1 LGD 0.1600
71 H14 2.5129 2.4856 2.6576 H 1 LGD 0.1017
72 H15 2.7898 2.5533 4.3911 H 1 LGD 0.1017
73 H16 1.1209 -1.2952 3.6235 H 1 LGD 0.1582
74 H17 4.2738 0.3616 3.0111 H 1 LGD 0.0679
75 H18 4.1142 0.5228 4.7492 H 1 LGD 0.0679
76 H19 3.2158 -1.8312 4.9033 H 1 LGD 0.0449
77 H20 3.3926 -2.0051 3.1384 H 1 LGD 0.0449
78 H21 4.8259 -1.7800 4.1590 H 1 LGD 0.0449
79 H22 0.3558 2.6723 1.7338 H 1 LGD 0.0953
80 H23 0.5295 4.2721 2.4347 H 1 LGD 0.0953
81 H24 -0.0403 -2.5705 -1.3106 H 1 LGD 0.1425
82 H25 2.0710 -0.2306 -3.4951 H 1 LGD 0.0903
83 H26 3.2557 -0.3109 -1.4838 H 1 LGD 0.0842
84 H27 2.2727 0.6593 -0.3865 H 1 LGD 0.0842
85 H28 3.5725 -1.8519 0.1842 H 1 LGD 0.0973
86 H29 2.4697 -0.9670 1.2674 H 1 LGD 0.0973
87 H30 1.8840 -2.8529 -4.5219 H 1 LGD 0.1232
88 H31 1.4181 -5.4097 -2.5864 H 1 LGD 0.1779
89 H32 3.4626 -1.9600 -2.9961 H 1 LGD 0.0417
90 H33 3.7541 -2.9173 -1.5523 H 1 LGD 0.0417
91 H34 3.0502 -3.7750 0.6642 H 1 LGD 0.0992
92 H35 1.4821 -4.0477 1.4215 H 1 LGD 0.0992
93 H36 -1.1797 -2.4694 -3.1383 H 1 LGD 0.4292
94 H37 1.2610 1.7192 -4.8184 H 1 LGD 0.0545
95 H38 0.1332 2.8131 -3.9882 H 1 LGD 0.0545
96 H39 1.7091 2.4198 -3.2410 H 1 LGD 0.0545
97 H40 1.5764 -5.8857 -0.1885 H 1 LGD 0.1842
98 H41 5.0900 -3.7067 -3.4907 H 1 LGD 0.0568
99 H42 4.0239 -4.9817 -2.8867 H 1 LGD 0.0568
100 H43 3.6175 -4.1146 -4.3827 H 1 LGD 0.0568
101 H44 1.3795 -1.2348 -7.9752 H 1 LGD 0.0605
102 H45 1.2378 0.4803 -7.4954 H 1 LGD 0.0605
103 H46 2.8336 -0.3141 -7.5109 H 1 LGD 0.0605
104 H47 -2.3714 -6.0625 -3.9751 H 1 LGD 0.0916
105 H48 -1.8264 -5.2490 -5.4699 H 1 LGD 0.0916
106 H49 -0.7662 -6.4328 -4.6666 H 1 LGD 0.0916
107 H50 -0.3271 -0.8063 0.8926 H 1 LGD 0.0932
108 H51 -1.6916 2.6625 -2.4121 H 1 LGD 0.1710
109 H52 -3.8330 3.4539 -1.8896 H 1 LGD 0.0580
110 H53 -4.2493 4.4387 -0.4650 H 1 LGD 0.0580
111 H54 -2.6105 4.5362 -1.1561 H 1 LGD 0.0580
112 H55 0.8219 3.4473 4.5153 H 1 LGD 0.4497
113 H56 0.7638 -2.1880 0.6656 H 1 LGD 0.4388
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 2
5 2 6 1
6 3 7 1
7 4 8 1
8 4 9 2
9 5 10 1
10 6 11 1
11 7 12 1
12 7 21 1
13 8 13 1
14 10 14 ar
15 11 15 ar
16 12 16 1
17 14 17 ar
18 15 18 ar
19 16 19 1
20 10 11 ar
21 19 20 1
22 17 18 ar
23 20 21 2
24 20 22 1
25 22 23 1
26 5 24 1
27 16 24 1
28 25 26 1
29 25 27 1
30 25 28 1
31 26 29 1
32 26 30 1
33 27 31 1
34 27 32 1
35 28 34 1
36 29 35 1
37 29 36 1
38 29 37 1
39 30 38 1
40 31 39 1
41 31 40 1
42 32 41 1
43 35 42 1
44 36 43 2
45 37 44 1
46 39 45 1
47 30 34 1
48 31 35 1
49 32 33 1
50 38 43 1
51 39 46 2
52 45 47 1
53 48 49 1
54 42 49 1
55 49 50 2
56 51 52 ar
57 33 53 ar
58 52 54 ar
59 53 55 ar
60 55 56 1
61 56 57 1
62 54 55 ar
63 25 51 1
64 33 51 ar
65 1 54 1
66 3 58 1
67 3 59 1
68 6 60 1
69 7 61 1
70 12 62 1
71 12 63 1
72 13 64 1
73 13 65 1
74 13 66 1
75 14 67 1
76 15 68 1
77 17 69 1
78 18 70 1
79 19 71 1
80 19 72 1
81 21 73 1
82 22 74 1
83 22 75 1
84 23 76 1
85 23 77 1
86 23 78 1
87 24 79 1
88 24 80 1
89 26 81 1
90 27 82 1
91 28 83 1
92 28 84 1
93 34 85 1
94 34 86 1
95 35 87 1
96 36 88 1
97 37 89 1
98 37 90 1
99 38 91 1
100 38 92 1
101 40 93 1
102 41 94 1
103 41 95 1
104 41 96 1
105 43 97 1
106 44 98 1
107 44 99 1
108 44 100 1
109 47 101 1
110 47 102 1
111 47 103 1
112 48 104 1
113 48 105 1
114 48 106 1
115 52 107 1
116 53 108 1
117 57 109 1
118 57 110 1
119 57 111 1
120 16 112 1
121 30 113 1