@COMMENT
LIGANDBOX_ID = D01935-03
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D01935
NAME = Vinorelbine_tartrate_(USP)_Vinorelbine_ditartrate_(JAN)_KW_2307_Navelbine_(TN)
MOLECULAR_FORMULA = C45H54N4O8
MOLECULAR_WEIGHT = 778.947
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 8
NUM_OF_CHIRAL_ATOMS = 8
TPSA = 133.8700
HOMO = -12.8481
LUMO = -5.5773
mLOGD = 2.217
mLOGPA = -4.730
mLOGS = -2.772
@MOLECULE
D01935-03
113 121 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -2.5314 0.7524 2.1031 C.3 1 LGD 0.0370
2 C2 -2.6705 2.2119 2.6445 C.ar 1 LGD 0.0085
3 C3 -1.7663 -0.1839 3.1568 C.3 1 LGD -0.0434
4 C4 -3.9348 0.0997 1.9167 C.2 1 LGD 0.6183
5 C5 -1.6723 3.2255 2.8109 C.ar 1 LGD -0.2470
6 N1 -3.9176 2.7806 2.9896 N.ar 1 LGD -0.1432
7 C6 -0.3767 0.3939 3.4367 C.3 1 LGD -0.0889
8 O1 -4.6132 -0.0211 3.1014 O.3 1 LGD -0.4561
9 O2 -4.3832 -0.2701 0.8425 O.2 1 LGD -0.4653
10 C7 -2.3856 4.3883 3.2738 C.ar 1 LGD -0.0847
11 C8 -3.7038 4.0808 3.3596 C.ar 1 LGD -0.0286
12 C9 -0.3923 1.5213 4.4770 C.3 1 LGD 0.1202
13 C10 -5.9265 -0.6093 3.1048 C.3 1 LGD 0.1216
14 C11 -1.9114 5.6606 3.6177 C.ar 1 LGD -0.1243
15 C12 -4.6696 5.0000 3.7828 C.ar 1 LGD -0.1323
16 N2 0.4867 2.5560 3.9039 N.4 1 LGD -0.6814
17 C13 -2.8516 6.6206 4.0489 C.ar 1 LGD -0.1122
18 C14 -4.2261 6.2924 4.1301 C.ar 1 LGD -0.0905
19 C15 1.8726 1.9852 3.7060 C.3 1 LGD 0.1569
20 C16 1.9746 0.4224 3.8039 C.2 1 LGD -0.1404
21 C17 0.8765 -0.3561 3.7002 C.2 1 LGD -0.1577
22 C18 3.3948 -0.0871 4.0141 C.3 1 LGD -0.0463
23 C19 3.5212 -1.6233 4.1325 C.3 1 LGD -0.0889
24 C20 -0.1495 3.1164 2.6616 C.3 1 LGD 0.2129
25 C21 0.9118 -0.8872 -1.4814 C.3 1 LGD -0.0202
26 C22 0.8308 -2.3958 -1.2104 C.3 1 LGD 0.1357
27 C23 0.8712 -0.5063 -3.0132 C.3 1 LGD 0.2497
28 C24 2.1590 -0.4529 -0.6866 C.3 1 LGD -0.0903
29 C25 1.5859 -3.3085 -2.2554 C.3 1 LGD -0.0267
30 N3 1.2844 -2.5528 0.1963 N.4 1 LGD -0.6672
31 C26 0.1792 -1.6536 -3.8633 C.3 1 LGD 0.0943
32 N4 0.0534 0.7433 -3.0579 N.pl3 1 LGD -0.6420
33 C27 -0.6490 0.8537 -1.8724 C.ar 1 LGD 0.2307
34 C28 2.2959 -1.4930 0.4558 C.3 1 LGD 0.1033
35 C29 0.9221 -3.0443 -3.6865 C.3 1 LGD 0.1766
36 C30 1.2598 -4.7018 -1.7429 C.2 1 LGD -0.1110
37 C31 3.1606 -3.1678 -2.2116 C.3 1 LGD -0.0729
38 C32 1.7192 -3.9218 0.5961 C.3 1 LGD 0.1604
39 C33 -0.0275 -1.2800 -5.3610 C.2 1 LGD 0.6299
40 O3 -1.1537 -1.8428 -3.3466 O.3 1 LGD -0.6012
41 C34 0.6836 1.9292 -3.6614 C.3 1 LGD 0.1902
42 O4 1.7695 -3.3954 -4.8253 O.3 1 LGD -0.4436
43 C35 1.3035 -4.9701 -0.4322 C.2 1 LGD -0.2171
44 C36 3.9595 -4.3597 -2.8088 C.3 1 LGD -0.0969
45 O5 0.9632 -0.4872 -5.8663 O.3 1 LGD -0.4261
46 O6 -1.0045 -1.6318 -6.0050 O.2 1 LGD -0.4925
47 C37 0.9307 -0.1060 -7.2527 C.3 1 LGD 0.1237
48 C38 3.3851 -3.4022 -6.5802 C.3 1 LGD -0.1455
49 C39 2.8270 -2.6922 -5.3523 C.2 1 LGD 0.6522
50 O7 3.2763 -1.6415 -4.9327 O.2 1 LGD -0.5250
51 C40 -0.2736 -0.0948 -0.9524 C.ar 1 LGD -0.2289
52 C41 -0.8900 -0.1735 0.2997 C.ar 1 LGD -0.0598
53 C42 -1.6586 1.7743 -1.5837 C.ar 1 LGD -0.2281
54 C43 -1.8764 0.7781 0.6707 C.ar 1 LGD -0.1558
55 C44 -2.2798 1.7391 -0.3107 C.ar 1 LGD 0.2382
56 O8 -3.3046 2.6200 -0.0149 O.3 1 LGD -0.3473
57 C45 -3.7166 3.6924 -0.8787 C.3 1 LGD 0.1356
58 H1 -2.3187 -0.2384 4.1037 H 1 LGD 0.0785
59 H2 -1.6976 -1.2149 2.7895 H 1 LGD 0.0785
60 H3 -4.8107 2.3099 2.9611 H 1 LGD 0.3346
61 H4 -0.1046 0.7531 2.4506 H 1 LGD 0.0666
62 H5 -1.3966 1.9092 4.6491 H 1 LGD 0.1198
63 H6 0.0126 1.1685 5.4275 H 1 LGD 0.1198
64 H7 -6.3235 -0.6307 4.1272 H 1 LGD 0.0633
65 H8 -6.6084 -0.0230 2.4758 H 1 LGD 0.0633
66 H9 -5.8845 -1.6375 2.7233 H 1 LGD 0.0633
67 H10 -0.8551 5.9039 3.5527 H 1 LGD 0.1262
68 H11 -5.7202 4.7302 3.8434 H 1 LGD 0.1551
69 H12 -2.5184 7.6183 4.3203 H 1 LGD 0.1542
70 H13 -4.9420 7.0385 4.4634 H 1 LGD 0.1603
71 H14 2.2465 2.3202 2.7369 H 1 LGD 0.1021
72 H15 2.5176 2.4229 4.4699 H 1 LGD 0.1021
73 H16 0.8556 -1.4425 3.7552 H 1 LGD 0.1593
74 H17 4.0266 0.2550 3.1843 H 1 LGD 0.0689
75 H18 3.8125 0.3704 4.9201 H 1 LGD 0.0689
76 H19 2.9461 -1.9981 4.9886 H 1 LGD 0.0450
77 H20 3.1607 -2.1211 3.2238 H 1 LGD 0.0450
78 H21 4.5703 -1.9088 4.2795 H 1 LGD 0.0450
79 H22 0.0931 2.4938 1.8000 H 1 LGD 0.0959
80 H23 0.2751 4.1041 2.4749 H 1 LGD 0.0959
81 H24 -0.2205 -2.6876 -1.2494 H 1 LGD 0.1339
82 H25 1.8889 -0.3196 -3.3742 H 1 LGD 0.1171
83 H26 3.0560 -0.4644 -1.3157 H 1 LGD 0.0869
84 H27 2.0567 0.5624 -0.2822 H 1 LGD 0.0869
85 H28 3.2999 -1.9198 0.4541 H 1 LGD 0.0964
86 H29 2.1011 -1.0330 1.4259 H 1 LGD 0.0964
87 H30 0.1030 -3.7737 -3.7325 H 1 LGD 0.1030
88 H31 0.9869 -5.4625 -2.4728 H 1 LGD 0.1806
89 H32 3.4802 -2.2288 -2.6626 H 1 LGD 0.0447
90 H33 3.5121 -3.0939 -1.1808 H 1 LGD 0.0447
91 H34 2.8065 -3.9258 0.6891 H 1 LGD 0.0997
92 H35 1.2975 -4.1539 1.5757 H 1 LGD 0.0997
93 H36 -1.7257 -2.0694 -4.1029 H 1 LGD 0.4552
94 H37 1.1645 1.6715 -4.6118 H 1 LGD 0.0560
95 H38 -0.0702 2.7013 -3.8585 H 1 LGD 0.0560
96 H39 1.4462 2.3370 -2.9861 H 1 LGD 0.0560
97 H40 1.0686 -5.9613 -0.0491 H 1 LGD 0.1833
98 H41 4.9895 -4.0533 -3.0300 H 1 LGD 0.0544
99 H42 4.0078 -5.1867 -2.0892 H 1 LGD 0.0544
100 H43 3.5184 -4.7555 -3.7284 H 1 LGD 0.0544
101 H44 0.9209 -0.9985 -7.8916 H 1 LGD 0.0623
102 H45 0.0376 0.4955 -7.4632 H 1 LGD 0.0623
103 H46 1.8210 0.4867 -7.4964 H 1 LGD 0.0623
104 H47 4.2540 -2.8595 -6.9728 H 1 LGD 0.0846
105 H48 3.6890 -4.4231 -6.3188 H 1 LGD 0.0846
106 H49 2.6150 -3.4552 -7.3597 H 1 LGD 0.0846
107 H50 -0.5660 -0.9433 0.9846 H 1 LGD 0.0924
108 H51 -1.9531 2.4902 -2.3433 H 1 LGD 0.1694
109 H52 -4.0913 3.2949 -1.8301 H 1 LGD 0.0575
110 H53 -4.5198 4.2657 -0.3997 H 1 LGD 0.0575
111 H54 -2.8746 4.3684 -1.0740 H 1 LGD 0.0575
112 H55 0.5457 3.3103 4.5744 H 1 LGD 0.4499
113 H56 0.4784 -2.3265 0.7601 H 1 LGD 0.4372
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 2
5 2 6 1
6 3 7 1
7 4 8 1
8 4 9 2
9 5 10 1
10 6 11 1
11 7 12 1
12 7 21 1
13 8 13 1
14 10 14 ar
15 11 15 ar
16 12 16 1
17 14 17 ar
18 15 18 ar
19 16 19 1
20 10 11 ar
21 19 20 1
22 17 18 ar
23 20 21 2
24 20 22 1
25 22 23 1
26 5 24 1
27 16 24 1
28 25 26 1
29 25 27 1
30 25 28 1
31 26 29 1
32 26 30 1
33 27 31 1
34 27 32 1
35 28 34 1
36 29 35 1
37 29 36 1
38 29 37 1
39 30 38 1
40 31 39 1
41 31 40 1
42 32 41 1
43 35 42 1
44 36 43 2
45 37 44 1
46 39 45 1
47 30 34 1
48 31 35 1
49 32 33 1
50 38 43 1
51 39 46 2
52 45 47 1
53 48 49 1
54 42 49 1
55 49 50 2
56 51 52 ar
57 33 53 ar
58 52 54 ar
59 53 55 ar
60 55 56 1
61 56 57 1
62 54 55 ar
63 25 51 1
64 33 51 ar
65 1 54 1
66 3 58 1
67 3 59 1
68 6 60 1
69 7 61 1
70 12 62 1
71 12 63 1
72 13 64 1
73 13 65 1
74 13 66 1
75 14 67 1
76 15 68 1
77 17 69 1
78 18 70 1
79 19 71 1
80 19 72 1
81 21 73 1
82 22 74 1
83 22 75 1
84 23 76 1
85 23 77 1
86 23 78 1
87 24 79 1
88 24 80 1
89 26 81 1
90 27 82 1
91 28 83 1
92 28 84 1
93 34 85 1
94 34 86 1
95 35 87 1
96 36 88 1
97 37 89 1
98 37 90 1
99 38 91 1
100 38 92 1
101 40 93 1
102 41 94 1
103 41 95 1
104 41 96 1
105 43 97 1
106 44 98 1
107 44 99 1
108 44 100 1
109 47 101 1
110 47 102 1
111 47 103 1
112 48 104 1
113 48 105 1
114 48 106 1
115 52 107 1
116 53 108 1
117 57 109 1
118 57 110 1
119 57 111 1
120 16 112 1
121 30 113 1