@COMMENT
LIGANDBOX_ID = D01935-04
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D01935
NAME = Vinorelbine_tartrate_(USP)_Vinorelbine_ditartrate_(JAN)_KW_2307_Navelbine_(TN)
MOLECULAR_FORMULA = C45H54N4O8
MOLECULAR_WEIGHT = 778.947
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 8
NUM_OF_CHIRAL_ATOMS = 8
TPSA = 133.8700
HOMO = -12.8481
LUMO = -5.5773
mLOGD = 2.217
mLOGPA = -4.730
mLOGS = -2.772
@MOLECULE
D01935-04
113 121 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -2.0841 0.9442 1.8177 C.3 1 LGD 0.0372
2 C2 -2.2248 2.4048 2.3543 C.ar 1 LGD 0.0059
3 C3 -1.3179 0.0128 2.8731 C.3 1 LGD -0.0432
4 C4 -3.4857 0.2893 1.6251 C.2 1 LGD 0.6238
5 C5 -1.2275 3.4210 2.5088 C.ar 1 LGD -0.2459
6 N1 -3.4722 2.9752 2.6951 N.ar 1 LGD -0.1435
7 C6 0.0723 0.5933 3.1479 C.3 1 LGD -0.0884
8 O1 -4.1713 0.1706 2.8055 O.3 1 LGD -0.4525
9 O2 -3.9281 -0.0827 0.5489 O.2 1 LGD -0.4781
10 C7 -1.9421 4.5890 2.9562 C.ar 1 LGD -0.0847
11 C8 -3.2601 4.2810 3.0465 C.ar 1 LGD -0.0284
12 C9 0.0649 1.7275 4.1803 C.3 1 LGD 0.1208
13 C10 -5.4859 -0.4154 2.7981 C.3 1 LGD 0.1208
14 C11 -1.4699 5.8676 3.2785 C.ar 1 LGD -0.1240
15 C12 -4.2275 5.2062 3.4523 C.ar 1 LGD -0.1327
16 N2 0.9395 2.7587 3.5929 N.4 1 LGD -0.6815
17 C13 -2.4117 6.8335 3.6928 C.ar 1 LGD -0.1116
18 C14 -3.7858 6.5050 3.7781 C.ar 1 LGD -0.0896
19 C15 2.3241 2.1874 3.3859 C.3 1 LGD 0.1573
20 C16 2.4279 0.6245 3.4825 C.2 1 LGD -0.1427
21 C17 1.3291 -0.1548 3.3963 C.2 1 LGD -0.1548
22 C18 3.8512 0.1147 3.6677 C.3 1 LGD -0.0461
23 C19 3.9793 -1.4221 3.7767 C.3 1 LGD -0.0888
24 C20 0.2945 3.3129 2.3522 C.3 1 LGD 0.2129
25 C21 1.3203 -0.7248 -1.7908 C.3 1 LGD -0.0192
26 C22 1.2712 -2.2363 -1.4862 C.3 1 LGD 0.1379
27 C23 1.2215 -0.3730 -3.3208 C.3 1 LGD 0.2096
28 C24 2.6044 -0.2471 -1.0779 C.3 1 LGD -0.0938
29 C25 1.9578 -3.1470 -2.5765 C.3 1 LGD -0.0304
30 N3 1.8529 -2.3532 -0.1221 N.4 1 LGD -0.6643
31 C26 0.5255 -1.4967 -4.1858 C.3 1 LGD 0.1061
32 N4 0.4252 0.8821 -3.3698 N.pl3 1 LGD -0.6586
33 C27 -0.2227 1.0364 -2.1607 C.ar 1 LGD 0.2138
34 C28 2.8750 -1.2871 0.0309 C.3 1 LGD 0.1007
35 C29 1.2335 -2.8989 -3.9736 C.3 1 LGD 0.1917
36 C30 1.8557 -4.5561 -2.0162 C.2 1 LGD -0.0929
37 C31 3.5013 -2.8697 -2.7703 C.3 1 LGD -0.0759
38 C32 2.3648 -3.6914 0.2856 C.3 1 LGD 0.1617
39 C33 -1.0297 -1.5390 -3.9838 C.2 1 LGD 0.6134
40 O3 0.7297 -1.1384 -5.5609 O.3 1 LGD -0.5677
41 C34 1.0326 2.0259 -4.0671 C.3 1 LGD 0.1902
42 O4 0.4142 -4.0015 -4.4678 O.3 1 LGD -0.4241
43 C35 2.0165 -4.7882 -0.7106 C.2 1 LGD -0.2119
44 C36 4.2568 -3.9363 -3.6108 C.3 1 LGD -0.0995
45 O5 -1.4050 -1.7347 -2.6862 O.3 1 LGD -0.4507
46 O6 -1.8300 -1.3846 -4.8940 O.2 1 LGD -0.4797
47 C37 -2.7966 -1.7576 -2.3255 C.3 1 LGD 0.1362
48 C38 -1.3088 -5.6229 -4.7423 C.3 1 LGD -0.1471
49 C39 -0.6261 -4.6184 -3.8209 C.2 1 LGD 0.6451
50 O7 -0.9588 -4.4360 -2.6636 O.2 1 LGD -0.5412
51 C40 0.1701 0.0977 -1.2354 C.ar 1 LGD -0.2144
52 C41 -0.4354 0.0197 0.0196 C.ar 1 LGD -0.0548
53 C42 -1.2324 1.9534 -1.8725 C.ar 1 LGD -0.2284
54 C43 -1.4265 0.9692 0.3886 C.ar 1 LGD -0.1572
55 C44 -1.8404 1.9248 -0.5947 C.ar 1 LGD 0.2358
56 O8 -2.8705 2.8002 -0.3009 O.3 1 LGD -0.3466
57 C45 -3.2897 3.8666 -1.1690 C.3 1 LGD 0.1349
58 H1 -1.8699 -0.0386 3.8204 H 1 LGD 0.0800
59 H2 -1.2483 -1.0188 2.5077 H 1 LGD 0.0800
60 H3 -4.3652 2.5039 2.6696 H 1 LGD 0.3342
61 H4 0.3381 0.9504 2.1601 H 1 LGD 0.0652
62 H5 -0.9381 2.1168 4.3568 H 1 LGD 0.1201
63 H6 0.4773 1.3812 5.1300 H 1 LGD 0.1201
64 H7 -5.8916 -0.4366 3.8170 H 1 LGD 0.0640
65 H8 -6.1614 0.1723 2.1634 H 1 LGD 0.0640
66 H9 -5.4426 -1.4434 2.4162 H 1 LGD 0.0640
67 H10 -0.4140 6.1115 3.2090 H 1 LGD 0.1265
68 H11 -5.2779 4.9366 3.5152 H 1 LGD 0.1553
69 H12 -2.0800 7.8362 3.9471 H 1 LGD 0.1547
70 H13 -4.5030 7.2559 4.0973 H 1 LGD 0.1608
71 H14 2.6918 2.5230 2.4147 H 1 LGD 0.1019
72 H15 2.9739 2.6249 4.1459 H 1 LGD 0.1019
73 H16 1.3098 -1.2413 3.4510 H 1 LGD 0.1604
74 H17 4.4693 0.4603 2.8291 H 1 LGD 0.0685
75 H18 4.2836 0.5684 4.5687 H 1 LGD 0.0685
76 H19 3.4196 -1.8006 4.6414 H 1 LGD 0.0449
77 H20 3.6019 -1.9157 2.8725 H 1 LGD 0.0449
78 H21 5.0307 -1.7088 3.9035 H 1 LGD 0.0449
79 H22 0.5327 2.6863 1.4922 H 1 LGD 0.0956
80 H23 0.7169 4.3001 2.1578 H 1 LGD 0.0956
81 H24 0.2304 -2.5552 -1.4230 H 1 LGD 0.1580
82 H25 2.2311 -0.1993 -3.7144 H 1 LGD 0.0902
83 H26 3.4573 -0.2046 -1.7645 H 1 LGD 0.0835
84 H27 2.4875 0.7559 -0.6471 H 1 LGD 0.0835
85 H28 3.8745 -1.7071 -0.0923 H 1 LGD 0.0968
86 H29 2.7916 -0.8356 1.0210 H 1 LGD 0.0968
87 H30 2.0561 -2.8514 -4.6953 H 1 LGD 0.1185
88 H31 1.6729 -5.3737 -2.7102 H 1 LGD 0.1791
89 H32 3.6538 -1.8978 -3.2519 H 1 LGD 0.0390
90 H33 4.0085 -2.8204 -1.8021 H 1 LGD 0.0390
91 H34 3.4507 -3.6304 0.3779 H 1 LGD 0.0971
92 H35 1.9610 -3.9327 1.2705 H 1 LGD 0.0971
93 H36 0.0898 -0.4339 -5.7695 H 1 LGD 0.4480
94 H37 1.4335 1.7086 -5.0380 H 1 LGD 0.0571
95 H38 0.2832 2.8073 -4.2430 H 1 LGD 0.0571
96 H39 1.8525 2.4422 -3.4682 H 1 LGD 0.0571
97 H40 1.9511 -5.7976 -0.3093 H 1 LGD 0.1839
98 H41 5.2991 -3.6276 -3.7588 H 1 LGD 0.0576
99 H42 4.2722 -4.9081 -3.1019 H 1 LGD 0.0576
100 H43 3.8102 -4.0772 -4.6020 H 1 LGD 0.0576
101 H44 -3.2640 -0.7898 -2.5462 H 1 LGD 0.0586
102 H45 -3.3212 -2.5477 -2.8775 H 1 LGD 0.0586
103 H46 -2.8960 -1.9576 -1.2514 H 1 LGD 0.0586
104 H47 -2.1724 -6.0778 -4.2417 H 1 LGD 0.0872
105 H48 -1.6502 -5.1184 -5.6549 H 1 LGD 0.0872
106 H49 -0.6005 -6.4115 -5.0250 H 1 LGD 0.0872
107 H50 -0.1060 -0.7550 0.6985 H 1 LGD 0.0998
108 H51 -1.5449 2.6533 -2.6399 H 1 LGD 0.1706
109 H52 -3.6674 3.4627 -2.1166 H 1 LGD 0.0583
110 H53 -4.0924 4.4406 -0.6900 H 1 LGD 0.0583
111 H54 -2.4505 4.5438 -1.3723 H 1 LGD 0.0583
112 H55 1.0043 3.5172 4.2580 H 1 LGD 0.4502
113 H56 1.0991 -2.1214 0.5084 H 1 LGD 0.4356
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 2
5 2 6 1
6 3 7 1
7 4 8 1
8 4 9 2
9 5 10 1
10 6 11 1
11 7 12 1
12 7 21 1
13 8 13 1
14 10 14 ar
15 11 15 ar
16 12 16 1
17 14 17 ar
18 15 18 ar
19 16 19 1
20 10 11 ar
21 19 20 1
22 17 18 ar
23 20 21 2
24 20 22 1
25 22 23 1
26 5 24 1
27 16 24 1
28 25 26 1
29 25 27 1
30 25 28 1
31 26 29 1
32 26 30 1
33 27 31 1
34 27 32 1
35 28 34 1
36 29 35 1
37 29 36 1
38 29 37 1
39 30 38 1
40 31 39 1
41 31 40 1
42 32 41 1
43 35 42 1
44 36 43 2
45 37 44 1
46 39 45 1
47 30 34 1
48 31 35 1
49 32 33 1
50 38 43 1
51 39 46 2
52 45 47 1
53 48 49 1
54 42 49 1
55 49 50 2
56 51 52 ar
57 33 53 ar
58 52 54 ar
59 53 55 ar
60 55 56 1
61 56 57 1
62 54 55 ar
63 25 51 1
64 33 51 ar
65 1 54 1
66 3 58 1
67 3 59 1
68 6 60 1
69 7 61 1
70 12 62 1
71 12 63 1
72 13 64 1
73 13 65 1
74 13 66 1
75 14 67 1
76 15 68 1
77 17 69 1
78 18 70 1
79 19 71 1
80 19 72 1
81 21 73 1
82 22 74 1
83 22 75 1
84 23 76 1
85 23 77 1
86 23 78 1
87 24 79 1
88 24 80 1
89 26 81 1
90 27 82 1
91 28 83 1
92 28 84 1
93 34 85 1
94 34 86 1
95 35 87 1
96 36 88 1
97 37 89 1
98 37 90 1
99 38 91 1
100 38 92 1
101 40 93 1
102 41 94 1
103 41 95 1
104 41 96 1
105 43 97 1
106 44 98 1
107 44 99 1
108 44 100 1
109 47 101 1
110 47 102 1
111 47 103 1
112 48 104 1
113 48 105 1
114 48 106 1
115 52 107 1
116 53 108 1
117 57 109 1
118 57 110 1
119 57 111 1
120 16 112 1
121 30 113 1