@COMMENT
LIGANDBOX_ID = D01990-09
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D01990
NAME = Clindamycin_palmitate_hydrochloride_(JAN/USP)_Cleocin_pediatric_(TN)
MOLECULAR_FORMULA = C34H63N2O6SCl
MOLECULAR_WEIGHT = 663.404
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 3
NUM_OF_ACCEPTOR = 6
NUM_OF_CHIRAL_ATOMS = 9
TPSA = 108.3300
HOMO = -10.4257
LUMO = -4.0372
mLOGS = -2.685
mLOGPA = -4.452
mLOGD = 2.076
@MOLECULE
D01990-09
108 109 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -1.3955 0.7662 -0.7556 C.3 1 LGD 0.1129
2 C2 -2.6894 1.5247 -0.3056 C.3 1 LGD 0.0723
3 C3 -3.1819 2.5231 -1.3890 C.3 1 LGD 0.1329
4 C4 -2.0122 3.4351 -1.8394 C.3 1 LGD 0.1293
5 C5 -0.8152 2.5645 -2.3048 C.3 1 LGD 0.2527
6 O1 -0.4138 1.7344 -1.1930 O.3 1 LGD -0.3912
7 S1 0.6288 3.6014 -2.8035 S.3 1 LGD -0.2988
8 C6 -0.0633 4.4826 -4.2654 C.3 1 LGD 0.0009
9 O2 -1.5545 4.2102 -0.7113 O.3 1 LGD -0.4257
10 C7 -2.2511 5.2837 -0.2377 C.2 1 LGD 0.6369
11 C8 -1.5686 5.8584 1.0059 C.3 1 LGD -0.1253
12 C9 -0.1468 6.4020 0.6970 C.3 1 LGD -0.0779
13 C10 0.7869 6.3361 1.9342 C.3 1 LGD -0.0708
14 C11 2.2487 6.7871 1.6519 C.3 1 LGD -0.0726
15 C12 2.9689 6.0526 0.4827 C.3 1 LGD -0.0745
16 C13 2.9094 4.5050 0.5724 C.3 1 LGD -0.0769
17 C14 3.6701 3.8159 -0.5875 C.3 1 LGD -0.0754
18 C15 3.3871 2.2954 -0.6242 C.3 1 LGD -0.0789
19 C16 4.0806 1.5764 -1.8042 C.3 1 LGD -0.0751
20 C17 3.7496 0.0609 -1.8586 C.3 1 LGD -0.0751
21 C18 4.4442 -0.7514 -0.7329 C.3 1 LGD -0.0769
22 C19 4.2820 -2.2843 -0.8924 C.3 1 LGD -0.0769
23 C20 2.8756 -2.8052 -0.5005 C.3 1 LGD -0.0768
24 C21 2.7897 -4.3463 -0.6262 C.3 1 LGD -0.0791
25 C22 1.4401 -4.9062 -0.1347 C.3 1 LGD -0.0875
26 O3 -3.6871 1.8102 -2.5195 O.3 1 LGD -0.6000
27 O4 -3.7399 0.6125 0.0201 O.3 1 LGD -0.6092
28 C23 -0.7153 -0.1368 0.3392 C.3 1 LGD 0.1282
29 N1 -1.5118 -1.3497 0.5722 N.am 1 LGD -0.5793
30 C24 -0.4314 0.4991 1.7484 C.3 1 LGD 0.0584
31 Cl1 -1.9129 0.6046 2.7949 Cl 1 LGD -0.2187
32 C25 0.3029 1.8577 1.7362 C.3 1 LGD -0.0969
33 C26 -1.5904 -2.4046 -0.3198 C.2 1 LGD 0.6560
34 C27 -2.4776 -3.5904 0.0838 C.3 1 LGD 0.0304
35 O5 -0.9821 -2.3692 -1.3763 O.2 1 LGD -0.5698
36 N2 -2.5598 -4.6378 -0.9588 N.4 1 LGD -0.6514
37 C28 -2.9215 -5.8691 -0.2310 C.3 1 LGD 0.1048
38 C29 -2.0381 -5.8142 1.0212 C.3 1 LGD -0.0904
39 C30 -1.9582 -4.3116 1.3470 C.3 1 LGD -0.0991
40 C31 -3.5624 -4.3062 -1.9902 C.3 1 LGD 0.0940
41 C32 -2.5720 -6.6865 2.1847 C.3 1 LGD -0.0678
42 C33 -1.6015 -6.7126 3.3931 C.3 1 LGD -0.0770
43 C34 -2.1133 -7.6165 4.5337 C.3 1 LGD -0.0931
44 O6 -3.2778 5.7236 -0.7265 O.2 1 LGD -0.5170
45 H1 -1.6515 0.1312 -1.6133 H 1 LGD 0.0635
46 H2 -2.4497 2.1187 0.5832 H 1 LGD 0.0706
47 H3 -3.9820 3.1418 -0.9637 H 1 LGD 0.0826
48 H4 -2.3407 4.0950 -2.6516 H 1 LGD 0.0934
49 H5 -1.0965 1.9364 -3.1582 H 1 LGD 0.0830
50 H6 -0.8586 5.1678 -3.9473 H 1 LGD 0.0692
51 H7 0.7315 5.0611 -4.7520 H 1 LGD 0.0692
52 H8 -0.4705 3.7555 -4.9788 H 1 LGD 0.0692
53 H9 -2.1935 6.6506 1.4375 H 1 LGD 0.0727
54 H10 -1.5087 5.0517 1.7479 H 1 LGD 0.0727
55 H11 0.2951 5.8174 -0.1177 H 1 LGD 0.0595
56 H12 -0.2183 7.4350 0.3331 H 1 LGD 0.0595
57 H13 0.3703 6.9674 2.7296 H 1 LGD 0.0358
58 H14 0.7977 5.3132 2.3321 H 1 LGD 0.0358
59 H15 2.2542 7.8649 1.4446 H 1 LGD 0.0421
60 H16 2.8363 6.6502 2.5689 H 1 LGD 0.0421
61 H17 2.5383 6.3787 -0.4726 H 1 LGD 0.0416
62 H18 4.0195 6.3698 0.4669 H 1 LGD 0.0416
63 H19 3.3257 4.1734 1.5325 H 1 LGD 0.0357
64 H20 1.8639 4.1763 0.5466 H 1 LGD 0.0357
65 H21 3.3675 4.2640 -1.5425 H 1 LGD 0.0432
66 H22 4.7480 3.9913 -0.4766 H 1 LGD 0.0432
67 H23 3.7016 1.8494 0.3274 H 1 LGD 0.0347
68 H24 2.3069 2.1370 -0.7172 H 1 LGD 0.0347
69 H25 3.7540 2.0410 -2.7436 H 1 LGD 0.0448
70 H26 5.1672 1.7190 -1.7430 H 1 LGD 0.0448
71 H27 2.6621 -0.0804 -1.8086 H 1 LGD 0.0367
72 H28 4.0723 -0.3299 -2.8320 H 1 LGD 0.0367
73 H29 5.5163 -0.5162 -0.7394 H 1 LGD 0.0411
74 H30 4.0628 -0.4456 0.2493 H 1 LGD 0.0411
75 H31 4.5124 -2.5754 -1.9255 H 1 LGD 0.0433
76 H32 5.0289 -2.7779 -0.2571 H 1 LGD 0.0433
77 H33 2.6529 -2.5100 0.5333 H 1 LGD 0.0340
78 H34 2.1116 -2.3440 -1.1391 H 1 LGD 0.0340
79 H35 2.9426 -4.6380 -1.6732 H 1 LGD 0.0496
80 H36 3.5978 -4.8085 -0.0443 H 1 LGD 0.0496
81 H37 1.2838 -4.6634 0.9235 H 1 LGD 0.0175
82 H38 0.6077 -4.4923 -0.7160 H 1 LGD 0.0175
83 H39 1.4178 -5.9981 -0.2393 H 1 LGD 0.0175
84 H40 -4.2207 1.0769 -2.1637 H 1 LGD 0.4235
85 H41 -3.4395 0.0944 0.7872 H 1 LGD 0.4075
86 H42 0.2556 -0.4484 -0.0694 H 1 LGD 0.1067
87 H43 -2.0057 -1.4320 1.4488 H 1 LGD 0.3293
88 H44 0.2191 -0.2053 2.2825 H 1 LGD 0.0740
89 H45 0.5264 2.1794 2.7609 H 1 LGD 0.0699
90 H46 1.2538 1.7718 1.2034 H 1 LGD 0.0699
91 H47 -0.2987 2.6449 1.2674 H 1 LGD 0.0699
92 H48 -3.4828 -3.2127 0.2789 H 1 LGD 0.1188
93 H49 -3.9747 -5.8243 0.0534 H 1 LGD 0.1097
94 H50 -2.7303 -6.7599 -0.8322 H 1 LGD 0.1097
95 H51 -1.0380 -6.1673 0.7394 H 1 LGD 0.0830
96 H52 -2.5849 -4.0455 2.2078 H 1 LGD 0.0957
97 H53 -0.9245 -4.0277 1.5812 H 1 LGD 0.0957
98 H54 -3.2720 -3.3845 -2.4980 H 1 LGD 0.1047
99 H55 -3.6223 -5.1171 -2.7182 H 1 LGD 0.1047
100 H56 -4.5385 -4.1681 -1.5213 H 1 LGD 0.1047
101 H57 -3.5540 -6.3153 2.5064 H 1 LGD 0.0579
102 H58 -2.7239 -7.7119 1.8234 H 1 LGD 0.0579
103 H59 -0.6171 -7.0711 3.0653 H 1 LGD 0.0442
104 H60 -1.4580 -5.6963 3.7814 H 1 LGD 0.0442
105 H61 -1.4009 -7.6200 5.3683 H 1 LGD 0.0467
106 H62 -3.0796 -7.2590 4.9114 H 1 LGD 0.0467
107 H63 -2.2377 -8.6503 4.1872 H 1 LGD 0.0467
108 H64 -1.6471 -4.7508 -1.3823 H 1 LGD 0.4709
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 5 7 1
8 7 8 1
9 4 9 1
10 9 10 1
11 10 11 1
12 11 12 1
13 12 13 1
14 13 14 1
15 14 15 1
16 15 16 1
17 16 17 1
18 17 18 1
19 18 19 1
20 19 20 1
21 20 21 1
22 21 22 1
23 22 23 1
24 23 24 1
25 24 25 1
26 3 26 1
27 2 27 1
28 1 28 1
29 28 29 1
30 28 30 1
31 30 31 1
32 30 32 1
33 29 33 am
34 33 34 1
35 33 35 2
36 34 36 1
37 36 37 1
38 37 38 1
39 38 39 1
40 34 39 1
41 36 40 1
42 38 41 1
43 41 42 1
44 42 43 1
45 10 44 2
46 1 45 1
47 2 46 1
48 3 47 1
49 4 48 1
50 5 49 1
51 8 50 1
52 8 51 1
53 8 52 1
54 11 53 1
55 11 54 1
56 12 55 1
57 12 56 1
58 13 57 1
59 13 58 1
60 14 59 1
61 14 60 1
62 15 61 1
63 15 62 1
64 16 63 1
65 16 64 1
66 17 65 1
67 17 66 1
68 18 67 1
69 18 68 1
70 19 69 1
71 19 70 1
72 20 71 1
73 20 72 1
74 21 73 1
75 21 74 1
76 22 75 1
77 22 76 1
78 23 77 1
79 23 78 1
80 24 79 1
81 24 80 1
82 25 81 1
83 25 82 1
84 25 83 1
85 26 84 1
86 27 85 1
87 28 86 1
88 29 87 1
89 30 88 1
90 32 89 1
91 32 90 1
92 32 91 1
93 34 92 1
94 37 93 1
95 37 94 1
96 38 95 1
97 39 96 1
98 39 97 1
99 40 98 1
100 40 99 1
101 40 100 1
102 41 101 1
103 41 102 1
104 42 103 1
105 42 104 1
106 43 105 1
107 43 106 1
108 43 107 1
109 36 108 1