@COMMENT
LIGANDBOX_ID = D02115-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D02115
NAME = Methotrexate_sodium_Trexall_(TN)_Rasuvo_(TN)
MOLECULAR_FORMULA = C20H21N8O5
MOLECULAR_WEIGHT = 453.439
MOLECULAR_CHARGE = -1
NUM_OF_DONOR = 6
NUM_OF_ACCEPTOR = 9
NUM_OF_CHIRAL_ATOMS = 1
TPSA = 213.3700
HOMO = -0.4934
LUMO = 2.1773
mLOGD = -1.021
mLOGPA = -6.713
mLOGS = -2.421
@MOLECULE
D02115-02
53 55 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 0.6020 4.0831 2.7264 C.ar 1 LGD 0.9512
2 N1 1.4948 3.1398 3.0416 N.ar 1 LGD -0.8524
3 C2 2.0927 2.5152 2.0189 C.ar 1 LGD 0.7059
4 C3 1.8052 2.8247 0.6698 C.ar 1 LGD 0.0441
5 C4 0.8354 3.8485 0.4358 C.ar 1 LGD 0.6526
6 N2 0.2572 4.4602 1.4891 N.ar 1 LGD -0.8193
7 N3 2.4168 2.1711 -0.3509 N.ar 1 LGD -0.5823
8 C5 2.0673 2.5162 -1.6045 C.ar 1 LGD 0.2325
9 C6 1.1178 3.5205 -1.8420 C.ar 1 LGD 0.3749
10 N4 0.5154 4.1796 -0.8356 N.ar 1 LGD -0.6579
11 N5 -0.0057 4.7259 3.7590 N.pl3 1 LGD -0.9418
12 N6 2.9998 1.5393 2.3372 N.pl3 1 LGD -0.9312
13 C7 2.7031 1.7397 -2.7538 C.3 1 LGD 0.2061
14 N7 1.7061 0.9188 -3.4787 N.pl3 1 LGD -0.7492
15 C8 0.6985 0.2342 -2.7908 C.ar 1 LGD 0.1481
16 C9 1.6502 1.1268 -4.9361 C.3 1 LGD 0.2339
17 C10 1.0178 -0.5394 -1.6606 C.ar 1 LGD -0.1928
18 C11 0.0134 -1.1833 -0.9248 C.ar 1 LGD -0.0713
19 C12 -1.3392 -1.0704 -1.3072 C.ar 1 LGD -0.1158
20 C13 -1.6584 -0.3104 -2.4501 C.ar 1 LGD -0.0713
21 C14 -0.6499 0.3351 -3.1845 C.ar 1 LGD -0.1928
22 C15 -2.4301 -1.7332 -0.5035 C.2 1 LGD 0.6487
23 N8 -2.0768 -2.5012 0.5947 N.am 1 LGD -0.5206
24 O1 -3.6084 -1.5999 -0.7912 O.2 1 LGD -0.6537
25 C16 -3.0495 -3.2070 1.4473 C.3 1 LGD -0.0195
26 C17 -2.5150 -3.3757 2.9068 C.3 1 LGD -0.0349
27 C18 -0.9697 -3.3230 3.0995 C.3 1 LGD -0.2186
28 C19 -0.2016 -4.4164 2.3445 C.2 1 LGD 0.9603
29 O2 0.4136 -4.0746 1.3484 O.co2 1 LGD -0.8508
30 C20 -3.4785 -4.5528 0.8264 C.2 1 LGD 0.9358
31 O3 -2.6301 -5.2263 0.2669 O.co2 1 LGD -0.8311
32 O4 -4.6609 -4.8399 0.9087 O.co2 1 LGD -0.8311
33 O5 -0.2188 -5.5393 2.8178 O.co2 1 LGD -0.8508
34 H1 0.8241 3.7975 -2.8536 H 1 LGD 0.0305
35 H2 0.4253 4.6282 4.6645 H 1 LGD 0.4331
36 H3 -0.4786 5.5869 3.5346 H 1 LGD 0.4331
37 H4 2.9689 1.1864 3.2812 H 1 LGD 0.4491
38 H5 3.2629 0.9087 1.5942 H 1 LGD 0.4491
39 H6 3.1703 2.4591 -3.4386 H 1 LGD 0.0457
40 H7 3.4996 1.0898 -2.3691 H 1 LGD 0.0457
41 H8 1.1348 2.0677 -5.1660 H 1 LGD 0.0214
42 H9 2.6641 1.1629 -5.3541 H 1 LGD 0.0214
43 H10 1.1151 0.2988 -5.4181 H 1 LGD 0.0214
44 H11 2.0512 -0.6375 -1.3413 H 1 LGD 0.1168
45 H12 0.3014 -1.7605 -0.0518 H 1 LGD 0.1664
46 H13 -2.6925 -0.2072 -2.7672 H 1 LGD 0.1664
47 H14 -0.9270 0.9333 -4.0474 H 1 LGD 0.1168
48 H15 -1.0944 -2.6557 0.7758 H 1 LGD 0.3454
49 H16 -3.9633 -2.6023 1.5098 H 1 LGD 0.0344
50 H17 -2.9454 -2.5707 3.5160 H 1 LGD 0.0080
51 H18 -2.9032 -4.3091 3.3348 H 1 LGD 0.0080
52 H19 -0.5867 -2.3371 2.8034 H 1 LGD -0.0088
53 H20 -0.7423 -3.4240 4.1687 H 1 LGD -0.0088
@BOND
1 1 2 ar
2 2 3 ar
3 3 4 ar
4 4 5 ar
5 5 6 ar
6 1 6 ar
7 4 7 ar
8 7 8 ar
9 8 9 ar
10 9 10 ar
11 5 10 ar
12 1 11 1
13 3 12 1
14 8 13 1
15 13 14 1
16 14 15 1
17 14 16 1
18 15 17 ar
19 17 18 ar
20 18 19 ar
21 19 20 ar
22 20 21 ar
23 15 21 ar
24 19 22 1
25 22 23 am
26 22 24 2
27 23 25 1
28 25 26 1
29 26 27 1
30 27 28 1
31 28 29 1
32 25 30 1
33 30 31 1
34 30 32 2
35 28 33 2
36 9 34 1
37 11 35 1
38 11 36 1
39 12 37 1
40 12 38 1
41 13 39 1
42 13 40 1
43 16 41 1
44 16 42 1
45 16 43 1
46 17 44 1
47 18 45 1
48 20 46 1
49 21 47 1
50 23 48 1
51 25 49 1
52 26 50 1
53 26 51 1
54 27 52 1
55 27 53 1