@COMMENT
LIGANDBOX_ID = D02129-03
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D02129
NAME = Doxycycline_hyclate_(USP)_Doxycycline_hydrochloride_hydrate_(JP18)_Doryx_(TN)_Lymepak_(TN)_Periostat_(TN)_Vibra-tabs_(TN)
MOLECULAR_FORMULA = C22H24N2O8
MOLECULAR_WEIGHT = 444.440
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 7
NUM_OF_ACCEPTOR = 8
NUM_OF_CHIRAL_ATOMS = 6
TPSA = 181.6200
HOMO = -10.9991
LUMO = -5.2297
mLOGS = -0.915
mLOGD = 0.241
mLOGPA = -5.353
@MOLECULE
D02129-03
57 60 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -1.3040 -0.0503 0.3290 C.3 1 LGD -0.0609
2 C2 -0.9328 -1.5567 0.2755 C.3 1 LGD 0.0507
3 C3 -2.0560 0.2970 1.6485 C.3 1 LGD 0.1218
4 C4 -0.0319 0.8301 0.1882 C.3 1 LGD 0.1552
5 C5 -0.0744 -1.8359 -0.9715 C.2 1 LGD 0.1262
6 C6 -0.1906 -2.0031 1.5638 C.2 1 LGD 0.5180
7 C7 -1.1802 -0.0976 2.8342 C.2 1 LGD 0.0874
8 C8 0.7202 0.5842 -1.1563 C.3 1 LGD -0.0349
9 C9 0.6766 -0.8875 -1.6080 C.2 1 LGD -0.2228
10 O1 -0.1328 -3.1170 -1.3767 O.3 1 LGD -0.4178
11 C10 -0.3130 -1.1582 2.8199 C.2 1 LGD -0.2084
12 O2 0.4800 -3.0213 1.5402 O.2 1 LGD -0.3840
13 O3 -1.3136 0.7584 3.8609 O.3 1 LGD -0.4699
14 C11 2.2199 1.0384 -1.1546 C.3 1 LGD -0.0153
15 C12 1.5085 -1.1992 -2.8368 C.2 1 LGD 0.6105
16 C13 0.5395 -1.5104 4.0292 C.2 1 LGD 0.6649
17 C14 2.7258 1.0085 -2.6086 C.ar 1 LGD -0.0124
18 C15 2.3616 -0.0902 -3.4248 C.ar 1 LGD -0.2651
19 O4 1.5249 -2.3075 -3.3468 O.2 1 LGD -0.5152
20 N1 0.4404 -0.8360 5.2272 N.am 1 LGD -0.6796
21 O5 1.3608 -2.4082 4.0193 O.2 1 LGD -0.5375
22 C16 3.5315 2.0368 -3.1530 C.ar 1 LGD -0.1757
23 C17 2.8110 -0.1351 -4.7707 C.ar 1 LGD 0.2069
24 C18 3.9661 1.9790 -4.4826 C.ar 1 LGD -0.0581
25 C19 3.6047 0.8967 -5.2894 C.ar 1 LGD -0.1683
26 O6 2.4774 -1.1674 -5.5996 O.3 1 LGD -0.4919
27 C20 2.4963 2.3807 -0.4143 C.3 1 LGD -0.1048
28 N2 -3.3976 -0.3497 1.7188 N.4 1 LGD -0.6699
29 C21 -4.3157 0.2005 0.6979 C.3 1 LGD 0.0856
30 C22 -4.0657 -0.1765 3.0269 C.3 1 LGD 0.0856
31 O7 -0.4177 2.2034 0.2902 O.3 1 LGD -0.6329
32 O8 -2.1308 -2.3472 0.2013 O.3 1 LGD -0.6185
33 H1 -1.9415 0.1796 -0.5338 H 1 LGD 0.1050
34 H2 -2.2187 1.3762 1.6696 H 1 LGD 0.1303
35 H3 0.6561 0.5842 1.0064 H 1 LGD 0.0572
36 H4 0.1934 1.1706 -1.9220 H 1 LGD 0.0849
37 H5 -0.8289 -3.5525 -0.8561 H 1 LGD 0.4265
38 H6 -1.9015 1.4813 3.5802 H 1 LGD 0.4459
39 H7 2.7829 0.2772 -0.5979 H 1 LGD 0.0747
40 H8 -0.2116 -0.0715 5.3222 H 1 LGD 0.3325
41 H9 1.0290 -1.1083 6.0002 H 1 LGD 0.3325
42 H10 3.8316 2.8966 -2.5646 H 1 LGD 0.1379
43 H11 4.5826 2.7764 -4.8879 H 1 LGD 0.1492
44 H12 3.9418 0.8565 -6.3214 H 1 LGD 0.1629
45 H13 2.0097 -1.8357 -5.0639 H 1 LGD 0.4589
46 H14 3.5706 2.6019 -0.3994 H 1 LGD 0.0474
47 H15 2.1902 2.3333 0.6374 H 1 LGD 0.0474
48 H16 1.9751 3.2171 -0.8973 H 1 LGD 0.0474
49 H17 -4.4076 1.2803 0.8279 H 1 LGD 0.1049
50 H18 -5.2990 -0.2615 0.8038 H 1 LGD 0.1049
51 H19 -3.9333 -0.0137 -0.3012 H 1 LGD 0.1049
52 H20 -3.4627 -0.6325 3.8143 H 1 LGD 0.1049
53 H21 -5.0445 -0.6594 3.0046 H 1 LGD 0.1049
54 H22 -4.1937 0.8869 3.2366 H 1 LGD 0.1049
55 H23 0.3647 2.7416 0.0759 H 1 LGD 0.4515
56 H24 -1.9973 -3.1429 0.7482 H 1 LGD 0.4424
57 H25 -3.2781 -1.3394 1.5417 H 1 LGD 0.4672
@BOND
1 5 9 2
2 5 10 1
3 6 11 1
4 6 12 2
5 7 13 1
6 8 14 1
7 9 15 1
8 11 16 1
9 14 17 1
10 15 18 1
11 15 19 2
12 16 20 am
13 16 21 2
14 17 22 ar
15 18 23 ar
16 22 24 ar
17 23 25 ar
18 23 26 1
19 7 11 2
20 8 9 1
21 17 18 ar
22 24 25 ar
23 14 27 1
24 3 28 1
25 1 2 1
26 28 29 1
27 1 3 1
28 28 30 1
29 1 4 1
30 2 5 1
31 2 6 1
32 4 31 1
33 3 7 1
34 2 32 1
35 4 8 1
36 1 33 1
37 3 34 1
38 4 35 1
39 8 36 1
40 10 37 1
41 13 38 1
42 14 39 1
43 20 40 1
44 20 41 1
45 22 42 1
46 24 43 1
47 25 44 1
48 26 45 1
49 27 46 1
50 27 47 1
51 27 48 1
52 29 49 1
53 29 50 1
54 29 51 1
55 30 52 1
56 30 53 1
57 30 54 1
58 31 55 1
59 32 56 1
60 28 57 1