@COMMENT
LIGANDBOX_ID = D02168-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D02168
NAME = Topotecan_hydrochloride_(USAN)_Nogitecan_hydrochloride_(JAN)_Hycamtin_(TN)_Potactasol_(TN)
MOLECULAR_FORMULA = C23H23N3O5
MOLECULAR_WEIGHT = 421.453
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 6
NUM_OF_CHIRAL_ATOMS = 1
TPSA = 103.2000
HOMO = -10.9653
LUMO = -4.6810
mLOGPA = -5.310
mLOGD = 1.685
mLOGS = -1.897
@MOLECULE
D02168-02
55 59 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 3.5982 0.8770 -0.2699 C.2 1 LGD 0.7290
2 C2 1.5429 -0.3698 0.0080 C.2 1 LGD -0.0608
3 N1 2.2368 0.8137 -0.0587 N.am 1 LGD -0.3522
4 C3 1.3079 1.9580 0.1023 C.3 1 LGD 0.1445
5 C4 0.1332 -0.1094 0.1915 C.ar 1 LGD 0.4635
6 C5 -0.0381 1.2575 0.2600 C.ar 1 LGD -0.1774
7 C6 -1.3138 1.7876 0.4549 C.ar 1 LGD -0.1151
8 N2 -0.8513 -1.0155 0.2709 N.ar 1 LGD -0.5957
9 C7 -2.1078 -0.5360 0.4448 C.ar 1 LGD 0.3793
10 C8 -2.3890 0.8657 0.5577 C.ar 1 LGD -0.0822
11 C9 -3.7219 1.3100 0.7662 C.ar 1 LGD -0.2818
12 C10 -4.7644 0.3623 0.8372 C.ar 1 LGD 0.1827
13 C11 -4.4902 -1.0036 0.7032 C.ar 1 LGD -0.1489
14 C12 -3.1754 -1.4453 0.5161 C.ar 1 LGD -0.0709
15 C13 -4.0584 2.7930 0.9286 C.3 1 LGD 0.1664
16 N3 -4.6733 3.3044 -0.3132 N.4 1 LGD -0.6697
17 C14 -3.6928 3.3568 -1.4165 C.3 1 LGD 0.0868
18 C15 -5.1974 4.6619 -0.0681 C.3 1 LGD 0.0868
19 O1 -6.0563 0.7575 1.0403 O.3 1 LGD -0.4697
20 O2 4.2076 1.9288 -0.3623 O.2 1 LGD -0.5975
21 C16 4.2160 -0.4742 -0.3724 C.2 1 LGD -0.2085
22 C17 5.6955 -0.5626 -0.6410 C.3 1 LGD 0.2062
23 C18 3.5239 -1.6774 -0.2631 C.2 1 LGD -0.0523
24 C19 2.0821 -1.6319 -0.0740 C.2 1 LGD -0.1319
25 O3 6.2639 -1.5826 0.1995 O.3 1 LGD -0.4148
26 C20 5.6894 -2.8228 0.3443 C.2 1 LGD 0.7663
27 C21 4.3011 -2.9953 -0.3676 C.3 1 LGD 0.1013
28 O4 6.2209 -3.6826 1.0241 O.2 1 LGD -0.5272
29 C22 3.5002 -4.2234 0.2128 C.3 1 LGD -0.0852
30 C23 4.1468 -5.6264 0.0388 C.3 1 LGD -0.0892
31 O5 4.5564 -3.2545 -1.7518 O.3 1 LGD -0.5742
32 H1 1.5671 2.5355 0.9987 H 1 LGD 0.0925
33 H2 1.3277 2.5938 -0.7918 H 1 LGD 0.0925
34 H3 -1.4451 2.8623 0.5159 H 1 LGD 0.1322
35 H4 -5.2998 -1.7265 0.7555 H 1 LGD 0.1811
36 H5 -2.9793 -2.5102 0.4245 H 1 LGD 0.1815
37 H6 -4.7682 2.9205 1.7479 H 1 LGD 0.1051
38 H7 -3.1767 3.3879 1.1662 H 1 LGD 0.1051
39 H8 -4.1726 3.7509 -2.3143 H 1 LGD 0.1031
40 H9 -2.8595 4.0041 -1.1374 H 1 LGD 0.1031
41 H10 -3.3172 2.3523 -1.6205 H 1 LGD 0.1031
42 H11 -5.9321 4.6318 0.7387 H 1 LGD 0.1031
43 H12 -4.3783 5.3258 0.2151 H 1 LGD 0.1031
44 H13 -5.6731 5.0414 -0.9743 H 1 LGD 0.1031
45 H14 -6.0650 1.7034 1.2624 H 1 LGD 0.4078
46 H15 5.8597 -0.8146 -1.6964 H 1 LGD 0.0933
47 H16 6.1932 0.3940 -0.4394 H 1 LGD 0.0933
48 H17 1.4549 -2.5101 0.0030 H 1 LGD 0.1806
49 H18 3.2882 -4.0543 1.2767 H 1 LGD 0.0447
50 H19 2.5314 -4.2912 -0.2939 H 1 LGD 0.0447
51 H20 4.9852 -5.7865 0.7253 H 1 LGD 0.0497
52 H21 3.4055 -6.4051 0.2583 H 1 LGD 0.0497
53 H22 4.4998 -5.7864 -0.9872 H 1 LGD 0.0497
54 H23 3.6941 -3.3357 -2.1958 H 1 LGD 0.4170
55 H24 -5.4350 2.6946 -0.5809 H 1 LGD 0.4533
@BOND
1 2 3 1
2 3 4 1
3 4 6 1
4 2 5 1
5 5 6 ar
6 6 7 ar
7 7 10 ar
8 8 9 ar
9 5 8 ar
10 9 10 ar
11 10 11 ar
12 11 12 ar
13 12 13 ar
14 13 14 ar
15 9 14 ar
16 11 15 1
17 15 16 1
18 16 17 1
19 16 18 1
20 1 3 am
21 12 19 1
22 1 20 2
23 1 21 1
24 21 22 1
25 21 23 2
26 23 24 1
27 2 24 2
28 22 25 1
29 25 26 1
30 26 27 1
31 23 27 1
32 26 28 2
33 27 29 1
34 29 30 1
35 27 31 1
36 4 32 1
37 4 33 1
38 7 34 1
39 13 35 1
40 14 36 1
41 15 37 1
42 15 38 1
43 17 39 1
44 17 40 1
45 17 41 1
46 18 42 1
47 18 43 1
48 18 44 1
49 19 45 1
50 22 46 1
51 22 47 1
52 24 48 1
53 29 49 1
54 29 50 1
55 30 51 1
56 30 52 1
57 30 53 1
58 31 54 1
59 16 55 1