@COMMENT
LIGANDBOX_ID = D02230-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D02230
NAME = Gramicidin_S_hydrochloride_(JAN)_Gramicidin_S_dihydrochloride
MOLECULAR_FORMULA = C60H92N12O10
MOLECULAR_WEIGHT = 1141.470
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 12
NUM_OF_ACCEPTOR = 10
NUM_OF_CHIRAL_ATOMS = 10
TPSA = 325.4600
HOMO = -11.7203
LUMO = -5.1043
mLOGPA = -6.120
mLOGD = -0.419
mLOGS = 1.546
@MOLECULE
D02230-01
176 180 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 33.0690 -19.6440 0.3940 C.3 1 LGD 0.0505
2 C2 32.7040 -19.1610 1.8110 C.3 1 LGD -0.0826
3 C3 33.2820 -17.7400 1.9090 C.3 1 LGD -0.0949
4 C4 33.4200 -17.2530 0.4550 C.3 1 LGD 0.1030
5 N1 33.3510 -18.4430 -0.4070 N.am 1 LGD -0.5086
6 C5 29.4810 -16.2910 0.2620 C.3 1 LGD 0.0505
7 C6 29.1260 -16.3790 1.7600 C.3 1 LGD -0.0826
8 C7 28.3830 -17.7160 1.9300 C.3 1 LGD -0.0949
9 C8 28.7780 -18.5690 0.7100 C.3 1 LGD 0.1030
10 N2 29.3880 -17.6580 -0.2720 N.am 1 LGD -0.5086
11 C9 29.7890 -17.9800 -1.5660 C.2 1 LGD 0.6811
12 O1 30.5420 -17.2580 -2.1940 O.2 1 LGD -0.5946
13 N3 27.1770 -15.7510 -0.5780 N.am 1 LGD -0.5994
14 C10 26.1470 -15.1230 -1.4310 C.3 1 LGD 0.0663
15 C11 25.9890 -13.5790 -1.2250 C.3 1 LGD -0.0715
16 C12 25.9260 -13.1940 0.2770 C.3 1 LGD -0.0897
17 C13 24.7190 -13.0560 -1.9460 C.3 1 LGD -0.0897
18 C14 26.3330 -15.5260 -2.9070 C.2 1 LGD 0.6531
19 O2 25.5020 -16.2140 -3.4750 O.2 1 LGD -0.5856
20 N4 27.4650 -15.1090 -3.5970 N.am 1 LGD -0.6070
21 C15 27.6630 -15.3460 -5.0390 C.3 1 LGD 0.0649
22 C16 27.8020 -13.9950 -5.7910 C.3 1 LGD -0.1038
23 C17 26.5240 -13.1210 -5.7080 C.3 1 LGD -0.1179
24 C18 28.8930 -16.2370 -5.2750 C.2 1 LGD 0.6572
25 O3 28.7800 -17.3820 -5.6800 O.2 1 LGD -0.5778
26 N5 30.1550 -15.7090 -5.0440 N.am 1 LGD -0.5832
27 C19 31.3980 -16.4190 -5.3800 C.3 1 LGD 0.0617
28 C20 32.4580 -16.1130 -4.3140 C.2 1 LGD 0.6716
29 O4 32.6130 -14.9950 -3.8500 O.2 1 LGD -0.6113
30 N6 33.2180 -17.1690 -3.8400 N.am 1 LGD -0.5694
31 C21 28.5210 -15.3900 -0.5310 C.2 1 LGD 0.6560
32 O5 28.9250 -14.4060 -1.1250 O.2 1 LGD -0.5837
33 C22 26.6260 -11.8210 -6.5410 C.3 1 LGD 0.0876
34 N7 26.6550 -12.1170 -7.9800 N.4 1 LGD -0.8164
35 C23 33.8300 -17.1480 -2.5050 C.3 1 LGD 0.0618
36 C24 35.3510 -16.8660 -2.6000 C.3 1 LGD -0.0338
37 C25 31.8510 -16.0150 -6.8110 C.3 1 LGD -0.0825
38 C26 33.2180 -16.6080 -7.2650 C.3 1 LGD -0.0691
39 C27 33.6020 -16.0650 -8.6630 C.3 1 LGD -0.0874
40 C28 33.2280 -18.1580 -7.2730 C.3 1 LGD -0.0874
41 C29 36.1260 -17.9590 -3.3320 C.ar 1 LGD -0.0873
42 C30 36.2080 -17.9540 -4.7370 C.ar 1 LGD -0.1160
43 C31 36.9200 -18.9590 -5.4100 C.ar 1 LGD -0.1291
44 C32 37.5650 -19.9700 -4.6820 C.ar 1 LGD -0.1330
45 C33 37.4950 -19.9750 -3.2800 C.ar 1 LGD -0.1291
46 C34 36.7750 -18.9760 -2.6080 C.ar 1 LGD -0.1160
47 N8 34.0920 -21.9300 0.2350 N.am 1 LGD -0.5994
48 C35 35.2030 -22.8800 0.0380 C.3 1 LGD 0.0663
49 C36 34.8130 -24.2940 0.5690 C.3 1 LGD -0.0715
50 C37 33.5710 -24.9010 -0.1370 C.3 1 LGD -0.0897
51 C38 34.6120 -24.2730 2.1060 C.3 1 LGD -0.0897
52 C39 35.6340 -22.9030 -1.4420 C.2 1 LGD 0.6531
53 O6 36.8030 -23.0350 -1.7590 O.2 1 LGD -0.5856
54 N9 34.6700 -22.7370 -2.4270 N.am 1 LGD -0.6070
55 C40 34.9860 -22.6360 -3.8620 C.3 1 LGD 0.0649
56 C41 35.1830 -24.0480 -4.4890 C.3 1 LGD -0.1038
57 C42 33.9070 -24.9380 -4.5110 C.3 1 LGD -0.1179
58 C43 33.8890 -21.8200 -4.5620 C.2 1 LGD 0.6572
59 O7 34.1540 -20.9350 -5.3580 O.2 1 LGD -0.5778
60 N10 32.5670 -22.0890 -4.2340 N.am 1 LGD -0.5832
61 C44 31.4350 -21.2410 -4.6290 C.3 1 LGD 0.0617
62 C45 30.6450 -20.8530 -3.3650 C.2 1 LGD 0.6716
63 O8 30.6700 -21.5410 -2.3540 O.2 1 LGD -0.6113
64 N11 29.9150 -19.6730 -3.3710 N.am 1 LGD -0.5694
65 C46 34.2980 -20.5700 0.4000 C.2 1 LGD 0.6560
66 O9 35.4340 -20.1420 0.5220 O.2 1 LGD -0.5837
67 C47 34.2040 -26.4090 -4.8860 C.3 1 LGD 0.0876
68 N12 34.6920 -26.5130 -6.2680 N.4 1 LGD -0.8164
69 C48 29.1320 -19.2180 -2.2090 C.3 1 LGD 0.0618
70 C49 27.6830 -18.8870 -2.6550 C.3 1 LGD -0.0338
71 C50 30.5720 -22.0320 -5.6510 C.3 1 LGD -0.0825
72 C51 29.4140 -21.2290 -6.3100 C.3 1 LGD -0.0691
73 C52 28.5030 -22.1730 -7.1310 C.3 1 LGD -0.0874
74 C53 29.9380 -20.0790 -7.2050 C.3 1 LGD -0.0874
75 C54 26.9920 -20.0100 -3.4250 C.ar 1 LGD -0.0873
76 C55 26.3000 -19.7160 -4.6160 C.ar 1 LGD -0.1160
77 C56 25.6620 -20.7360 -5.3390 C.ar 1 LGD -0.1291
78 C57 25.7080 -22.0600 -4.8750 C.ar 1 LGD -0.1330
79 C58 26.3910 -22.3610 -3.6870 C.ar 1 LGD -0.1291
80 C59 27.0270 -21.3410 -2.9620 C.ar 1 LGD -0.1160
81 C60 33.5260 -18.4830 -1.7900 C.2 1 LGD 0.6811
82 O10 33.4110 -19.5250 -2.4140 O.2 1 LGD -0.5946
83 H1 32.2230 -20.1890 -0.0470 H 1 LGD 0.0889
84 H2 31.6130 -19.1180 1.9160 H 1 LGD 0.0652
85 H3 33.0970 -19.8220 2.5940 H 1 LGD 0.0652
86 H4 32.6410 -17.0750 2.5020 H 1 LGD 0.0643
87 H5 34.2720 -17.7770 2.3800 H 1 LGD 0.0643
88 H6 32.5920 -16.5810 0.2030 H 1 LGD 0.0511
89 H7 34.3740 -16.7310 0.3140 H 1 LGD 0.0511
90 H8 30.4990 -15.9050 0.1340 H 1 LGD 0.0889
91 H9 30.0510 -16.3990 2.3510 H 1 LGD 0.0652
92 H10 28.5240 -15.5260 2.0980 H 1 LGD 0.0652
93 H11 27.3000 -17.5410 1.9230 H 1 LGD 0.0643
94 H12 28.6450 -18.2130 2.8730 H 1 LGD 0.0643
95 H13 29.5120 -19.3310 0.9970 H 1 LGD 0.0511
96 H14 27.8920 -19.0600 0.2900 H 1 LGD 0.0511
97 H15 26.9050 -16.5650 -0.0460 H 1 LGD 0.3205
98 H16 25.1930 -15.5720 -1.1270 H 1 LGD 0.1075
99 H17 26.8500 -13.0640 -1.6700 H 1 LGD 0.0635
100 H18 25.7450 -12.1180 0.3950 H 1 LGD 0.0404
101 H19 25.1170 -13.7330 0.7860 H 1 LGD 0.0404
102 H20 26.8680 -13.4260 0.7890 H 1 LGD 0.0404
103 H21 24.7390 -13.2940 -3.0160 H 1 LGD 0.0404
104 H22 23.8130 -13.5040 -1.5180 H 1 LGD 0.0404
105 H23 24.6390 -11.9660 -1.8490 H 1 LGD 0.0404
106 H24 28.1740 -14.6000 -3.0840 H 1 LGD 0.3390
107 H25 26.8050 -15.8820 -5.4630 H 1 LGD 0.1217
108 H26 28.6520 -13.4290 -5.3880 H 1 LGD 0.0514
109 H27 28.0330 -14.2080 -6.8420 H 1 LGD 0.0514
110 H28 25.6500 -13.7010 -6.0320 H 1 LGD 0.0898
111 H29 26.3500 -12.8420 -4.6620 H 1 LGD 0.0898
112 H30 30.2260 -14.7840 -4.6440 H 1 LGD 0.3208
113 H31 31.2210 -17.5000 -5.3480 H 1 LGD 0.0893
114 H32 33.1500 -18.0630 -4.3060 H 1 LGD 0.3335
115 H33 25.7570 -11.1870 -6.3260 H 1 LGD 0.1155
116 H34 27.5300 -11.2680 -6.2570 H 1 LGD 0.1155
117 H35 27.4310 -12.7330 -8.1780 H 1 LGD 0.4611
118 H36 26.6610 -11.2500 -8.4990 H 1 LGD 0.4611
119 H37 33.3650 -16.3430 -1.9240 H 1 LGD 0.0923
120 H38 35.5030 -15.9020 -3.1030 H 1 LGD 0.0618
121 H39 35.7550 -16.7410 -1.5880 H 1 LGD 0.0618
122 H40 31.0720 -16.3140 -7.5260 H 1 LGD 0.0436
123 H41 31.9100 -14.9200 -6.8610 H 1 LGD 0.0436
124 H42 33.9900 -16.2650 -6.5650 H 1 LGD 0.0631
125 H43 32.8650 -16.3670 -9.4180 H 1 LGD 0.0366
126 H44 33.6530 -14.9690 -8.6550 H 1 LGD 0.0366
127 H45 34.5840 -16.4440 -8.9720 H 1 LGD 0.0366
128 H46 34.2070 -18.5360 -7.5920 H 1 LGD 0.0366
129 H47 33.0310 -18.5650 -6.2750 H 1 LGD 0.0366
130 H48 32.4710 -18.5510 -7.9620 H 1 LGD 0.0366
131 H49 35.7220 -17.1700 -5.3070 H 1 LGD 0.1369
132 H50 36.9730 -18.9520 -6.4950 H 1 LGD 0.1349
133 H51 38.1170 -20.7480 -5.2020 H 1 LGD 0.1286
134 H52 37.9950 -20.7560 -2.7140 H 1 LGD 0.1349
135 H53 36.7250 -18.9900 -1.5230 H 1 LGD 0.1369
136 H54 33.1440 -22.2710 0.1670 H 1 LGD 0.3205
137 H55 36.0760 -22.5390 0.6090 H 1 LGD 0.1075
138 H56 35.6610 -24.9610 0.3670 H 1 LGD 0.0635
139 H57 33.7620 -25.0520 -1.2050 H 1 LGD 0.0404
140 H58 33.3260 -25.8810 0.2930 H 1 LGD 0.0404
141 H59 32.6890 -24.2570 -0.0300 H 1 LGD 0.0404
142 H60 34.4530 -25.2890 2.4900 H 1 LGD 0.0404
143 H61 35.4960 -23.8590 2.6080 H 1 LGD 0.0404
144 H62 33.7440 -23.6640 2.3860 H 1 LGD 0.0404
145 H63 33.7170 -22.5730 -2.1330 H 1 LGD 0.3390
146 H64 35.9200 -22.0760 -3.9800 H 1 LGD 0.1217
147 H65 35.5490 -23.9220 -5.5160 H 1 LGD 0.0514
148 H66 35.9780 -24.5700 -3.9410 H 1 LGD 0.0514
149 H67 33.4280 -24.9220 -3.5250 H 1 LGD 0.0898
150 H68 33.1790 -24.5300 -5.2230 H 1 LGD 0.0898
151 H69 32.3830 -22.8470 -3.5940 H 1 LGD 0.3208
152 H70 31.8010 -20.3140 -5.0860 H 1 LGD 0.0893
153 H71 29.9060 -19.1080 -4.2080 H 1 LGD 0.3335
154 H72 34.9500 -26.8250 -4.1970 H 1 LGD 0.1155
155 H73 33.2830 -26.9980 -4.7870 H 1 LGD 0.1155
156 H74 35.5210 -25.9450 -6.3710 H 1 LGD 0.4611
157 H75 34.8140 -27.4870 -6.5070 H 1 LGD 0.4611
158 H76 29.0910 -20.0060 -1.4500 H 1 LGD 0.0923
159 H77 27.0770 -18.6240 -1.7810 H 1 LGD 0.0618
160 H78 27.7170 -17.9850 -3.2760 H 1 LGD 0.0618
161 H79 31.2260 -22.4170 -6.4440 H 1 LGD 0.0436
162 H80 30.1560 -22.9130 -5.1430 H 1 LGD 0.0436
163 H81 28.7930 -20.7910 -5.5210 H 1 LGD 0.0631
164 H82 29.0600 -22.6450 -7.9500 H 1 LGD 0.0366
165 H83 28.0920 -22.9670 -6.4950 H 1 LGD 0.0366
166 H84 27.6590 -21.6210 -7.5640 H 1 LGD 0.0366
167 H85 30.6020 -20.4630 -7.9890 H 1 LGD 0.0366
168 H86 29.1050 -19.5550 -7.6900 H 1 LGD 0.0366
169 H87 30.4920 -19.3420 -6.6150 H 1 LGD 0.0366
170 H88 26.2590 -18.6950 -4.9860 H 1 LGD 0.1369
171 H89 25.1350 -20.5010 -6.2590 H 1 LGD 0.1349
172 H90 25.2160 -22.8490 -5.4350 H 1 LGD 0.1286
173 H91 26.4250 -23.3850 -3.3260 H 1 LGD 0.1349
174 H92 27.5460 -21.5900 -2.0410 H 1 LGD 0.1369
175 H93 25.8687 -12.6904 -8.2104 H 1 LGD 0.4611
176 H94 34.0481 -26.0491 -6.8764 H 1 LGD 0.4611
@BOND
1 28 30 am
2 13 14 1
3 41 42 ar
4 42 43 ar
5 43 44 ar
6 44 45 ar
7 45 46 ar
8 41 46 ar
9 14 15 1
10 15 16 1
11 15 17 1
12 14 18 1
13 18 19 2
14 18 20 am
15 20 21 1
16 21 22 1
17 22 23 1
18 21 24 1
19 24 25 2
20 24 26 am
21 26 27 1
22 8 9 1
23 13 31 am
24 9 10 1
25 31 32 2
26 6 10 1
27 61 62 1
28 62 63 2
29 62 64 am
30 47 48 1
31 48 49 1
32 49 50 1
33 49 51 1
34 48 52 1
35 52 53 2
36 52 54 am
37 54 55 1
38 55 56 1
39 56 57 1
40 55 58 1
41 58 59 2
42 58 60 am
43 60 61 1
44 23 33 1
45 47 65 am
46 1 5 1
47 65 66 2
48 33 34 1
49 57 67 1
50 67 68 1
51 30 35 1
52 64 69 1
53 11 12 2
54 69 70 1
55 35 36 1
56 61 71 1
57 1 2 1
58 71 72 1
59 27 37 1
60 72 73 1
61 2 3 1
62 72 74 1
63 37 38 1
64 70 75 1
65 3 4 1
66 38 39 1
67 4 5 1
68 38 40 1
69 6 7 1
70 75 76 ar
71 76 77 ar
72 77 78 ar
73 78 79 ar
74 79 80 ar
75 75 80 ar
76 36 41 1
77 7 8 1
78 81 82 2
79 11 69 1
80 35 81 1
81 6 31 1
82 10 11 am
83 1 65 1
84 5 81 am
85 27 28 1
86 28 29 2
87 1 83 1
88 2 84 1
89 2 85 1
90 3 86 1
91 3 87 1
92 4 88 1
93 4 89 1
94 6 90 1
95 7 91 1
96 7 92 1
97 8 93 1
98 8 94 1
99 9 95 1
100 9 96 1
101 13 97 1
102 14 98 1
103 15 99 1
104 16 100 1
105 16 101 1
106 16 102 1
107 17 103 1
108 17 104 1
109 17 105 1
110 20 106 1
111 21 107 1
112 22 108 1
113 22 109 1
114 23 110 1
115 23 111 1
116 26 112 1
117 27 113 1
118 30 114 1
119 33 115 1
120 33 116 1
121 34 117 1
122 34 118 1
123 35 119 1
124 36 120 1
125 36 121 1
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128 38 124 1
129 39 125 1
130 39 126 1
131 39 127 1
132 40 128 1
133 40 129 1
134 40 130 1
135 42 131 1
136 43 132 1
137 44 133 1
138 45 134 1
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140 47 136 1
141 48 137 1
142 49 138 1
143 50 139 1
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145 50 141 1
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148 51 144 1
149 54 145 1
150 55 146 1
151 56 147 1
152 56 148 1
153 57 149 1
154 57 150 1
155 60 151 1
156 61 152 1
157 64 153 1
158 67 154 1
159 67 155 1
160 68 156 1
161 68 157 1
162 69 158 1
163 70 159 1
164 70 160 1
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167 72 163 1
168 73 164 1
169 73 165 1
170 73 166 1
171 74 167 1
172 74 168 1
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174 76 170 1
175 77 171 1
176 78 172 1
177 79 173 1
178 80 174 1
179 34 175 1
180 68 176 1