@COMMENT
LIGANDBOX_ID = D02368-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D02368
NAME = Gemcitabine_(USAN/INN)
MOLECULAR_FORMULA = C9H11N3O4F2
MOLECULAR_WEIGHT = 263.200
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 4
NUM_OF_ACCEPTOR = 5
NUM_OF_CHIRAL_ATOMS = 3
TPSA = 108.3800
HOMO = -9.6263
LUMO = -0.4266
mLOGD = 0.454
mLOGPA = -5.878
mLOGS = -1.491
@MOLECULE
D02368-01
29 30 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 20.9190 -19.3500 0.4190 C.3 1 LGD 0.2707
2 N1 21.9250 -19.1040 1.4880 N.am 1 LGD -0.3921
3 C2 20.8840 -20.8060 -0.1300 C.3 1 LGD 0.3462
4 O1 19.5770 -19.0830 0.8730 O.3 1 LGD -0.3858
5 C3 21.6750 -19.4120 2.8290 C.2 1 LGD 0.8732
6 C4 23.1320 -18.5260 1.1130 C.2 1 LGD 0.0617
7 C5 19.3770 -21.1610 -0.1720 C.3 1 LGD 0.0682
8 F1 21.4440 -20.8490 -1.3620 F 1 LGD -0.2149
9 F2 21.5530 -21.6770 0.6620 F 1 LGD -0.2149
10 C6 18.6840 -19.7940 0.0020 C.3 1 LGD 0.0807
11 N2 22.6740 -19.0810 3.7440 N.2 1 LGD -0.7645
12 O2 20.6540 -19.9620 3.2060 O.2 1 LGD -0.5863
13 C7 24.0970 -18.2200 2.0500 C.2 1 LGD -0.3948
14 O3 18.9700 -21.8040 -1.3860 O.3 1 LGD -0.5760
15 C8 17.2830 -19.8680 0.6560 C.3 1 LGD 0.1560
16 C9 23.8310 -18.5150 3.4360 C.2 1 LGD 0.7635
17 O4 17.3630 -20.4140 1.9720 O.3 1 LGD -0.5992
18 N3 24.7480 -18.2290 4.4150 N.pl3 1 LGD -0.9182
19 H1 21.1420 -18.6670 -0.4090 H 1 LGD 0.0749
20 H2 23.2300 -18.3460 0.0490 H 1 LGD 0.1560
21 H3 19.1430 -21.8010 0.6880 H 1 LGD 0.1228
22 H4 18.6180 -19.2830 -0.9680 H 1 LGD 0.0635
23 H5 25.0350 -17.7640 1.7540 H 1 LGD 0.1521
24 H6 19.7750 -21.9580 -1.9130 H 1 LGD 0.4192
25 H7 16.8580 -18.8570 0.6980 H 1 LGD 0.0597
26 H8 16.6230 -20.4830 0.0320 H 1 LGD 0.0597
27 H9 18.1220 -19.9850 2.4100 H 1 LGD 0.4366
28 H10 24.5980 -18.6290 5.3300 H 1 LGD 0.4410
29 H11 25.6930 -18.0080 4.1340 H 1 LGD 0.4410
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 am
5 2 6 1
6 3 7 1
7 3 8 1
8 3 9 1
9 4 10 1
10 5 11 1
11 5 12 2
12 6 13 2
13 7 14 1
14 10 15 1
15 11 16 2
16 15 17 1
17 16 18 1
18 7 10 1
19 13 16 1
20 1 19 1
21 6 20 1
22 7 21 1
23 10 22 1
24 13 23 1
25 14 24 1
26 15 25 1
27 15 26 1
28 17 27 1
29 18 28 1
30 18 29 1