@COMMENT
LIGANDBOX_ID = D02368-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D02368
NAME = Gemcitabine_(USAN/INN)
MOLECULAR_FORMULA = C9H11N3O4F2
MOLECULAR_WEIGHT = 263.200
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 4
NUM_OF_ACCEPTOR = 5
NUM_OF_CHIRAL_ATOMS = 3
TPSA = 108.3800
HOMO = -9.6263
LUMO = -0.4266
mLOGD = 0.454
mLOGPA = -5.878
mLOGS = -1.491
@MOLECULE
D02368-02
29 30 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.2359 0.5370 -0.9439 C.3 1 LGD 0.2533
2 N1 0.7244 0.8512 0.1633 N.am 1 LGD -0.4029
3 C2 -1.7471 0.8192 -0.7111 C.3 1 LGD 0.3753
4 O1 -0.1650 -0.8481 -1.3413 O.3 1 LGD -0.4114
5 C3 0.5769 0.3947 1.4798 C.2 1 LGD 0.8791
6 C4 1.8579 1.5779 -0.1908 C.2 1 LGD 0.0668
7 C5 -2.4138 -0.5824 -0.6581 C.3 1 LGD 0.0842
8 F1 -1.9732 1.5576 0.4017 F 1 LGD -0.2101
9 F2 -2.2431 1.5144 -1.7593 F 1 LGD -0.2101
10 C6 -1.2361 -1.5884 -0.7270 C.3 1 LGD 0.0565
11 N2 1.5938 0.7112 2.3764 N.2 1 LGD -0.7688
12 O2 -0.3893 -0.2383 1.8634 O.2 1 LGD -0.6237
13 C7 2.8410 1.8663 0.7302 C.2 1 LGD -0.4007
14 O3 -3.1936 -0.7930 0.5215 O.3 1 LGD -0.5688
15 C8 -1.5254 -2.8556 -1.5673 C.3 1 LGD 0.1439
16 C9 2.6775 1.4006 2.0793 C.2 1 LGD 0.7638
17 O4 -1.7855 -2.5232 -2.9301 O.3 1 LGD -0.5984
18 N3 3.6170 1.6486 3.0386 N.pl3 1 LGD -0.9076
19 H1 0.0817 1.1438 -1.7993 H 1 LGD 0.0978
20 H2 1.8944 1.8763 -1.2310 H 1 LGD 0.1574
21 H3 -3.0499 -0.7058 -1.5442 H 1 LGD 0.1214
22 H4 -0.9436 -1.9067 0.2789 H 1 LGD 0.0941
23 H5 3.7219 2.4300 0.4455 H 1 LGD 0.1529
24 H6 -2.6618 -0.4740 1.2740 H 1 LGD 0.4382
25 H7 -0.6587 -3.5260 -1.5073 H 1 LGD 0.0634
26 H8 -2.3858 -3.3850 -1.1389 H 1 LGD 0.0634
27 H9 -1.0514 -1.9562 -3.2264 H 1 LGD 0.4132
28 H10 3.5398 1.1182 3.8930 H 1 LGD 0.4389
29 H11 4.5330 1.9358 2.7302 H 1 LGD 0.4389
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 am
5 2 6 1
6 3 7 1
7 3 8 1
8 3 9 1
9 4 10 1
10 5 11 1
11 5 12 2
12 6 13 2
13 7 14 1
14 10 15 1
15 11 16 2
16 15 17 1
17 16 18 1
18 7 10 1
19 13 16 1
20 1 19 1
21 6 20 1
22 7 21 1
23 10 22 1
24 13 23 1
25 14 24 1
26 15 25 1
27 15 26 1
28 17 27 1
29 18 28 1
30 18 29 1