@COMMENT
LIGANDBOX_ID = D02368-04
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D02368
NAME = Gemcitabine_(USAN/INN)
MOLECULAR_FORMULA = C9H11N3O4F2
MOLECULAR_WEIGHT = 263.200
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 4
NUM_OF_ACCEPTOR = 5
NUM_OF_CHIRAL_ATOMS = 3
TPSA = 108.3800
HOMO = -9.6263
LUMO = -0.4266
mLOGD = 0.454
mLOGPA = -5.878
mLOGS = -1.491
@MOLECULE
D02368-04
29 30 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.2093 0.1646 -0.3822 C.3 1 LGD 0.2697
2 N1 0.7674 0.4364 0.7066 N.am 1 LGD -0.3908
3 C2 -0.2404 -1.3063 -0.8815 C.3 1 LGD 0.3459
4 O1 -1.5658 0.4536 0.0149 O.3 1 LGD -0.3708
5 C3 0.4830 0.1664 2.0481 C.2 1 LGD 0.8692
6 C4 1.9851 0.9979 0.3459 C.2 1 LGD 0.0654
7 C5 -1.7486 -1.6390 -1.0179 C.3 1 LGD 0.0601
8 F1 0.4116 -1.4110 -2.0631 F 1 LGD -0.2173
9 F2 0.3477 -2.1572 -0.0089 F 1 LGD -0.2173
10 C6 -2.4746 -0.2822 -0.8295 C.3 1 LGD 0.1109
11 N2 1.4625 0.5069 2.9774 N.2 1 LGD -0.7666
12 O2 -0.5523 -0.3621 2.4143 O.2 1 LGD -0.5813
13 C7 2.9286 1.3155 1.2983 C.2 1 LGD -0.4005
14 O3 -2.0876 -2.2867 -2.2492 O.3 1 LGD -0.5847
15 C8 -2.8056 0.5202 -2.1296 C.3 1 LGD 0.1180
16 C9 2.6264 1.0532 2.6802 C.2 1 LGD 0.7575
17 O4 -1.6804 0.6929 -2.9900 O.3 1 LGD -0.6022
18 N3 3.5197 1.3413 3.6718 N.pl3 1 LGD -0.9102
19 H1 0.0511 0.8234 -1.2181 H 1 LGD 0.0940
20 H2 2.1071 1.1535 -0.7191 H 1 LGD 0.1584
21 H3 -2.0323 -2.2861 -0.1773 H 1 LGD 0.0943
22 H4 -3.4137 -0.4490 -0.2871 H 1 LGD 0.1068
23 H5 3.8777 1.7567 1.0163 H 1 LGD 0.1514
24 H6 -1.3855 -2.9345 -2.4392 H 1 LGD 0.4248
25 H7 -3.6004 -0.0068 -2.6724 H 1 LGD 0.0646
26 H8 -3.2062 1.5010 -1.8446 H 1 LGD 0.0646
27 H9 -1.3786 -0.1983 -3.2420 H 1 LGD 0.4125
28 H10 3.3367 0.9311 4.5749 H 1 LGD 0.4368
29 H11 4.4774 1.5041 3.4019 H 1 LGD 0.4368
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 2 5 am
5 2 6 1
6 3 7 1
7 3 8 1
8 3 9 1
9 4 10 1
10 5 11 1
11 5 12 2
12 6 13 2
13 7 14 1
14 10 15 1
15 11 16 2
16 15 17 1
17 16 18 1
18 7 10 1
19 13 16 1
20 1 19 1
21 6 20 1
22 7 21 1
23 10 22 1
24 13 23 1
25 14 24 1
26 15 25 1
27 15 26 1
28 17 27 1
29 18 28 1
30 18 29 1