@COMMENT
LIGANDBOX_ID = D02506-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D02506
NAME = Phenoxymethylpenicillin_benzathine_(JAN)_Penicillin_V_benzathine_tetrahydrate
MOLECULAR_FORMULA = C16H18N2O5S
MOLECULAR_WEIGHT = 350.394
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 5
NUM_OF_CHIRAL_ATOMS = 3
TPSA = 95.9400
HOMO = -4.5953
LUMO = 1.9372
mLOGD = 0.296
mLOGS = -2.360
mLOGPA = -5.403
@MOLECULE
D02506-02
41 43 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.8869 0.8187 -1.0058 C.3 1 LGD 0.0482
2 C2 -0.3084 1.9772 -1.8673 C.2 1 LGD 0.6847
3 N1 0.0656 1.1192 -2.8831 N.am 1 LGD -0.4408
4 C3 -0.4177 -0.0891 -2.1953 C.3 1 LGD 0.1519
5 C4 1.3619 1.0639 -3.5959 C.3 1 LGD -0.0481
6 C5 1.7661 -0.4382 -3.6693 C.3 1 LGD 0.0937
7 S1 1.1085 -1.1493 -2.0984 S.3 1 LGD -0.4040
8 C6 1.0559 -1.1320 -4.8640 C.3 1 LGD -0.0747
9 C7 3.2967 -0.6861 -3.7645 C.3 1 LGD -0.0747
10 C8 2.4307 1.9658 -2.9272 C.2 1 LGD 0.9373
11 O1 2.9622 2.7991 -3.6404 O.co2 1 LGD -0.8118
12 O2 2.6731 1.7971 -1.7425 O.co2 1 LGD -0.8118
13 N2 -0.1012 0.5944 0.2161 N.am 1 LGD -0.5653
14 C9 -0.5278 -0.2601 1.2199 C.2 1 LGD 0.6284
15 O3 -0.1122 3.1787 -1.8073 O.2 1 LGD -0.5493
16 O4 -1.6121 -0.8115 1.1210 O.2 1 LGD -0.5988
17 C10 0.4008 -0.4621 2.4263 C.3 1 LGD 0.0825
18 O5 -0.2016 -1.2904 3.4454 O.3 1 LGD -0.3325
19 C11 -1.2544 -0.8865 4.2471 C.ar 1 LGD 0.1651
20 C12 -1.7987 0.4158 4.1854 C.ar 1 LGD -0.1753
21 C13 -2.8667 0.7710 5.0261 C.ar 1 LGD -0.1002
22 C14 -3.3933 -0.1635 5.9315 C.ar 1 LGD -0.1756
23 C15 -2.8525 -1.4568 5.9979 C.ar 1 LGD -0.1002
24 C16 -1.7860 -1.8157 5.1578 C.ar 1 LGD -0.1753
25 H1 -1.9669 0.8679 -0.8320 H 1 LGD 0.0956
26 H2 -1.1983 -0.6260 -2.7403 H 1 LGD 0.0817
27 H3 1.2145 1.4469 -4.6138 H 1 LGD 0.0702
28 H4 -0.0279 -0.9629 -4.8447 H 1 LGD 0.0377
29 H5 1.4371 -0.7486 -5.8190 H 1 LGD 0.0377
30 H6 1.2260 -2.2159 -4.8420 H 1 LGD 0.0377
31 H7 3.5090 -1.7554 -3.8906 H 1 LGD 0.0377
32 H8 3.7265 -0.1522 -4.6217 H 1 LGD 0.0377
33 H9 3.8178 -0.3566 -2.8573 H 1 LGD 0.0377
34 H10 0.8114 1.0226 0.2917 H 1 LGD 0.3553
35 H11 1.3156 -0.9425 2.0583 H 1 LGD 0.0808
36 H12 0.6789 0.5166 2.8364 H 1 LGD 0.0808
37 H13 -1.4098 1.1579 3.4959 H 1 LGD 0.1400
38 H14 -3.2860 1.7718 4.9758 H 1 LGD 0.1269
39 H15 -4.2188 0.1143 6.5808 H 1 LGD 0.1222
40 H16 -3.2590 -2.1802 6.6990 H 1 LGD 0.1269
41 H17 -1.3704 -2.8178 5.2119 H 1 LGD 0.1400
@BOND
1 1 2 1
2 2 3 am
3 3 4 1
4 1 4 1
5 3 5 1
6 5 6 1
7 6 7 1
8 4 7 1
9 6 8 1
10 6 9 1
11 5 10 1
12 10 11 1
13 10 12 2
14 1 13 1
15 13 14 am
16 2 15 2
17 14 16 2
18 14 17 1
19 17 18 1
20 18 19 1
21 19 20 ar
22 20 21 ar
23 21 22 ar
24 22 23 ar
25 23 24 ar
26 19 24 ar
27 1 25 1
28 4 26 1
29 5 27 1
30 8 28 1
31 8 29 1
32 8 30 1
33 9 31 1
34 9 32 1
35 9 33 1
36 13 34 1
37 17 35 1
38 17 36 1
39 20 37 1
40 21 38 1
41 22 39 1
42 23 40 1
43 24 41 1